RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 UFSP1Q6NVU6 142 aa14.2□□□□□ -0.14
VARS-218ENST00000459667 OCC1Q8TAD7 63 aa14.2□□□□□ -0.14
VARS-218ENST00000459667 A0A1B0GVY2 172 aa14.19□□□□□ -0.14
VARS-218ENST00000459667 SNAI2O43623 268 aa14.19□□□□□ -0.14
VARS-218ENST00000459667 FAM74A4Q5TZK3 123 aa14.19□□□□□ -0.14
VARS-218ENST00000459667 SPANXN1Q5VSR9 72 aa14.19□□□□□ -0.14
VARS-218ENST00000459667 Q6ZSN1 163 aa14.19□□□□□ -0.14
VARS-218ENST00000459667 SFRP2Q96HF1 295 aa14.19□□□□□ -0.14
VARS-218ENST00000459667 SMIM7Q9BQ49 75 aa14.19□□□□□ -0.14
VARS-218ENST00000459667 SRP19P09132 144 aaKnown RBP14.18□□□□□ -0.14
VARS-218ENST00000459667 RAB14P61106 215 aa14.18□□□□□ -0.14
VARS-218ENST00000459667 PEA15Q15121 130 aa14.18□□□□□ -0.14
VARS-218ENST00000459667 SSBP4Q9BWG4 385 aaPredicted RBP14.18□□□□□ -0.14
VARS-218ENST00000459667 LY96Q9Y6Y9 160 aa14.18□□□□□ -0.14
VARS-218ENST00000459667 A0A087WWL8 130 aa14.17□□□□□ -0.14
VARS-218ENST00000459667 ZNF727A8MUV8 499 aa14.17□□□□□ -0.14
VARS-218ENST00000459667 WFDC10BQ8IUB3 73 aa14.17□□□□□ -0.14
VARS-218ENST00000459667 FER1L6-AS1Q8NA97 138 aa14.17□□□□□ -0.14
VARS-218ENST00000459667 OR10AG1Q8NH19 301 aa14.17□□□□□ -0.14
VARS-218ENST00000459667 TPPP3Q9BW30 176 aa14.17□□□□□ -0.14
VARS-218ENST00000459667 SMDT1Q9H4I9 107 aa14.17□□□□□ -0.14
VARS-218ENST00000459667 K7EN84 100 aa14.16□□□□□ -0.14
VARS-218ENST00000459667 TIRAPP58753 221 aa14.16□□□□□ -0.14
VARS-218ENST00000459667 NUDT10Q8NFP7 164 aa14.16□□□□□ -0.14
VARS-218ENST00000459667 NUDT11Q96G61 164 aa14.16□□□□□ -0.14
VARS-218ENST00000459667 RPP21Q9H633 154 aaKnown RBP14.16□□□□□ -0.14
VARS-218ENST00000459667 GZMBP10144 247 aa14.15□□□□□ -0.14
VARS-218ENST00000459667 C14orf178Q8N769 122 aaPredicted RBP14.15□□□□□ -0.14
VARS-218ENST00000459667 GAGE12JA6NER3 117 aa14.14□□□□□ -0.15
VARS-218ENST00000459667 F2Z2F3 143 aa14.14□□□□□ -0.15
VARS-218ENST00000459667 CRYGDP07320 174 aa14.14□□□□□ -0.15
VARS-218ENST00000459667 BTF3P20290 206 aaKnown RBP14.14□□□□□ -0.15
VARS-218ENST00000459667 CACNG7P62955 275 aa14.14□□□□□ -0.15
VARS-218ENST00000459667 TNP2Q05952 138 aa14.14□□□□□ -0.15
VARS-218ENST00000459667 GAGE1Q13065 139 aa14.14□□□□□ -0.15
VARS-218ENST00000459667 GAGE4Q13068 117 aa14.14□□□□□ -0.15
VARS-218ENST00000459667 GAGE5Q13069 117 aa14.14□□□□□ -0.15
VARS-218ENST00000459667 GAGE13Q4V321 117 aa14.14□□□□□ -0.15
VARS-218ENST00000459667 FAM74A3Q4VXF1 159 aa14.14□□□□□ -0.15
VARS-218ENST00000459667 ATP6V0E2Q8NHE4 81 aa14.14□□□□□ -0.15
VARS-218ENST00000459667 RNASE7Q9H1E1 156 aaKnown RBP14.14□□□□□ -0.15
VARS-218ENST00000459667 MUC21A0A0G2JKD1 596 aa14.13□□□□□ -0.15
VARS-218ENST00000459667 MUC21A0A140T8X8 626 aa14.13□□□□□ -0.15
VARS-218ENST00000459667 IGLC6P0CF74 106 aa14.13□□□□□ -0.15
VARS-218ENST00000459667 GATCO43716 136 aaKnown RBP14.12□□□□□ -0.15
VARS-218ENST00000459667 SMIM17P0DL12 118 aa14.12□□□□□ -0.15
VARS-218ENST00000459667 LINC00694P0DN24 101 aa14.12□□□□□ -0.15
VARS-218ENST00000459667 LINC00315P59091 139 aa14.12□□□□□ -0.15
VARS-218ENST00000459667 ERVFC1-1P60608 527 aa14.12□□□□□ -0.15
VARS-218ENST00000459667 SSTP61278 116 aa14.12□□□□□ -0.15
VARS-218ENST00000459667 FAM231DQ6ZW35 169 aa14.12□□□□□ -0.15
VARS-218ENST00000459667 AP1S3Q96PC3 154 aa14.12□□□□□ -0.15
VARS-218ENST00000459667 GTSF1LQ9H1H1 148 aa14.12□□□□□ -0.15
VARS-218ENST00000459667 TRAV9-2A0A087WT02 112 aa14.11□□□□□ -0.15
VARS-218ENST00000459667 DNAH10OSP0CZ25 163 aa14.11□□□□□ -0.15
VARS-218ENST00000459667 EVI2AP22794 236 aa14.11□□□□□ -0.15
VARS-218ENST00000459667 LINC01551Q86U37 167 aa14.11□□□□□ -0.15
VARS-218ENST00000459667 Q9UF83 564 aa14.11□□□□□ -0.15
VARS-218ENST00000459667 TRAV8-6A0A0B4J262 113 aa14.1□□□□□ -0.15
VARS-218ENST00000459667 OR10J3Q5JRS4 329 aa14.1□□□□□ -0.15
VARS-218ENST00000459667 LELP1Q5T871 98 aa14.1□□□□□ -0.15
VARS-218ENST00000459667 K7EP13 123 aa14.09□□□□□ -0.15
VARS-218ENST00000459667 RAB4BP61018 213 aa14.09□□□□□ -0.15
VARS-218ENST00000459667 ZNF56Q15929 161 aa14.09□□□□□ -0.15
VARS-218ENST00000459667 TMEM241Q24JQ0 296 aa14.09□□□□□ -0.15
VARS-218ENST00000459667 LYZL1Q6UWQ5 148 aa14.09□□□□□ -0.15
VARS-218ENST00000459667 IGHV3-38A0A0C4DH36 116 aa14.08□□□□□ -0.16
VARS-218ENST00000459667 TRBV10-1A0A0K0K1A3 114 aa14.08□□□□□ -0.16
VARS-218ENST00000459667 A8MWL6 223 aa14.08□□□□□ -0.16
VARS-218ENST00000459667 CTRLP40313 264 aa14.08□□□□□ -0.16
VARS-218ENST00000459667 WDR73Q6P4I2 378 aa14.08□□□□□ -0.16
VARS-218ENST00000459667 NAT8Q9UHE5 227 aa14.08□□□□□ -0.16
VARS-218ENST00000459667 C9JQL5 133 aa14.07□□□□□ -0.16
VARS-218ENST00000459667 F5H697 171 aa14.07□□□□□ -0.16
VARS-218ENST00000459667 TRGC1P0CF51 173 aa14.07□□□□□ -0.16
VARS-218ENST00000459667 SRSF3P84103 164 aaKnown RBP14.07□□□□□ -0.16
VARS-218ENST00000459667 CT83Q5H943 113 aa14.07□□□□□ -0.16
VARS-218ENST00000459667 C15orf54Q8N8G6 183 aa14.07□□□□□ -0.16
VARS-218ENST00000459667 PKD1P98161 4303 aa14.06□□□□□ -0.16
VARS-218ENST00000459667 C10orf126Q8N4M7 172 aa14.06□□□□□ -0.16
VARS-218ENST00000459667 OSTCQ9NRP0 149 aa14.06□□□□□ -0.16
VARS-218ENST00000459667 RPL36AP83881 106 aaKnown RBP14.05□□□□□ -0.16
VARS-218ENST00000459667 LINC01556Q5JQF7 62 aa14.05□□□□□ -0.16
VARS-218ENST00000459667 CLLU1Q5K131 121 aa14.05□□□□□ -0.16
VARS-218ENST00000459667 Q6ZRN7 208 aaPredicted RBP14.05□□□□□ -0.16
VARS-218ENST00000459667 RPL36ALQ969Q0 106 aaKnown RBP14.05□□□□□ -0.16
VARS-218ENST00000459667 TNFRSF18Q9Y5U5 241 aa14.05□□□□□ -0.16
VARS-218ENST00000459667 NTF3P20783 257 aa14.04□□□□□ -0.16
VARS-218ENST00000459667 ADIRFQ15847 76 aa14.04□□□□□ -0.16
VARS-218ENST00000459667 NFE4Q86UQ8 179 aa14.04□□□□□ -0.16
VARS-218ENST00000459667 BORCS7Q96B45 105 aa14.04□□□□□ -0.16
VARS-218ENST00000459667 MSRB1Q9NZV6 116 aa14.04□□□□□ -0.16
VARS-218ENST00000459667 RPL23P62829 140 aaKnown RBP14.03□□□□□ -0.16
VARS-218ENST00000459667 TWIST1Q15672 202 aa14.03□□□□□ -0.16
VARS-218ENST00000459667 ISOC2Q96AB3 205 aa14.03□□□□□ -0.16
VARS-218ENST00000459667 CNFNQ9BYD5 112 aa14.03□□□□□ -0.16
VARS-218ENST00000459667 KIF25-AS1Q9Y6Z4 181 aa14.03□□□□□ -0.16
VARS-218ENST00000459667 PKHD1P08F94 4074 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 TRBV7-3A0A075B6L6 115 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 A0A087WWC5 75 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms