RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 SPANXN5Q5MJ07 72 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 SLC48A1Q6P1K1 146 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 OR8B2Q96RD0 313 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 GFRA4Q9GZZ7 299 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 CYSTM1Q9H1C7 97 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 DIP2CQ9Y2E4 1556 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 MEGF6O75095 1541 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 TOP2AP11388 1531 aaKnown RBP2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 URB2Q14146 1524 aaKnown RBP2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 KCPQ6ZWJ8 1503 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 DUOX2Q9NRD8 1548 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 A0A1B0GUL6 1792 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 COL5A3P25940 1745 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 IGLV10-54A0A075B6I4 117 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 MUC21A0A140T8X8 626 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 CRYM-AS1A6NIL9 109 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 E7EUB6 86 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 KRTAP10-3P60369 221 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 GNG11P61952 73 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 WFDC2Q14508 124 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 NMSQ5H8A3 153 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 ZCCHC23Q6ZST2 131 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 KLF14Q8TD94 323 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 MINOS1-NBL1R4GNA1 71 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 DIDO1Q9BTC0 2240 aaKnown RBP2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 LAMB2P55268 1798 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 TOP2BQ02880 1626 aa2.46□□□□□ -2.02
HMGB3P30-201ENST00000457863 IQSEC2Q5JU85 1478 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 PLXNC1O60486 1568 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 TRBV10-3A0A0K0K1G6 114 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 NDUFC1O43677 76 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 BAALC-AS2P0C853 105 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 RNASE2P10153 161 aaKnown RBP2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 MIFP14174 115 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 UBE2G1P62253 170 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 LGALSLQ3ZCW2 172 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 SH2D6Q7Z4S9 175 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 LYPD6Q86Y78 171 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 OR8B3Q8NGG8 313 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 KDM6BO15054 1643 aa2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 COL2A1P02458 1487 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 COL11A1P12107 1806 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P30-201ENST00000457863 ZNF318Q5VUA4 2279 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 COL4A6Q14031 1691 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 CFAP43Q8NDM7 1665 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 ITSN2Q9NZM3 1697 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 IGHV3-64A0A075B6Q5 118 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 H3BUT2 72 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 CISD3P0C7P0 127 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 MPV17LQ2QL34 196 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 C14orf177Q52M58 125 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 C9orf116Q5BN46 136 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 C18orf32Q8TCD1 76 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 LINC01600Q96MT4 127 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 CYP4F30PQ9H0H9 118 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 NXT2Q9NPJ8 142 aaKnown RBP2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 ADAMTS7Q9UKP4 1686 aa2.44□□□□□ -2.02
HMGB3P30-201ENST00000457863 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 DOCK9Q9BZ29 2069 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 RNF17Q9BXT8 1623 aaKnown RBP2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 TRBV7-1A0A0A6YYK4 115 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 TRAV13-2A0A0B4J235 113 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 KANTRA0A1W2PQU2 76 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 TCRBV4S1A1TA0A5B7 111 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 ODF3BA8MYP8 253 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 ZNF861PO60384 105 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 WISP3O95389 354 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 IGKV3-11P04433 115 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 CXCL8P10145 99 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 RPL7L1Q6DKI1 246 aaKnown RBP2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 LYPD5Q6UWN5 251 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 KRTAP7-1Q8IUC3 87 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 TMEM254Q8TBM7 123 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 ODF3Q96PU9 254 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 C1orf167Q5SNV9 1468 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 PRXQ9BXM0 1461 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 ARHGAP32A7KAX9 2087 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 SDK2Q58EX2 2172 aa2.43□□□□□ -2.02
HMGB3P30-201ENST00000457863 PIK3C2BO00750 1634 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 TUBGCP6Q96RT7 1819 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 MICAL3Q7RTP6 2002 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 IGLV2-18A0A075B6J9 118 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 A0A087WWC5 75 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 A0A087WXM4 84 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 IGKV3D-11A0A0A0MRZ8 115 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 TRAV10A0A0B4J240 114 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 H7BZZ5 65 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 ERC2-IT1O76042 136 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 SIX6O95475 246 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 P0C880 135 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 PMCHL1Q16048 86 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 DEFB113Q30KQ7 82 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 CFAP126Q5VTH2 177 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 CYP2G1PQ6ZSU1 146 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 CMTM2Q8TAZ6 248 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 CDC42SE1Q9NRR8 79 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 HIGD1BQ9P298 99 aa2.42□□□□□ -2.02
HMGB3P30-201ENST00000457863 IGLV4-69A0A075B6H9 119 aa2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 C7orf77A4D0Y5 90 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms