RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 GATA3P23771 443 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 S100A4P26447 101 aaKnown RBP9.33□□□□□ -0.92
LINC00959-201ENST00000456581 PLEKHB2Q96CS7 222 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 SCGB3A1Q96QR1 104 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 SPAG8Q99932 426 aaPredicted RBP9.33□□□□□ -0.92
LINC00959-201ENST00000456581 IGLV1-40P01703 118 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 ANXA2RQ3ZCQ2 193 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 C9orf47Q6ZRZ4 202 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 ZFAND2AQ8N6M9 145 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 SVIPQ8NHG7 77 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 ZNF479Q96JC4 524 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 SPANXB1Q9NS25 103 aaPredicted RBP9.33□□□□□ -0.92
LINC00959-201ENST00000456581 HIGD1BQ9P298 99 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 NACAE9PAV3 2078 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 E9PLD3 99 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 TM2D2Q9BX73 214 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 C2CD3Q4AC94 2353 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 CFHR3Q02985 330 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 KRTAP1-3Q8IUG1 177 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 PTH2Q96A98 100 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 USMG5Q96IX5 58 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 NDUFA4O00483 81 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 SAMD13Q5VXD3 122 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 HLA-DRB4P13762 266 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 SUMO2P61956 95 aaKnown RBP9.31□□□□□ -0.92
LINC00959-201ENST00000456581 FOXI2Q6ZQN5 318 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 PHLDA3Q9Y5J5 127 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 HLA-DRB4X5D2U9 266 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 HOXA3O43365 443 aaPredicted RBP9.31□□□□□ -0.92
LINC00959-201ENST00000456581 MORN3Q6PF18 240 aaPredicted RBP9.31□□□□□ -0.92
LINC00959-201ENST00000456581 ZFP2Q6ZN57 461 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 WFDC11Q8NEX6 87 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 C20orf78Q9BR46 151 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 F8VRH5 84 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 DUSP14O95147 198 aaKnown RBP9.3□□□□□ -0.92
LINC00959-201ENST00000456581 JMJD1CQ15652 2540 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 TRBV7-3A0A075B6L6 115 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 A0A087WWL8 130 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 CD300EQ496F6 205 aaPredicted RBP9.3□□□□□ -0.92
LINC00959-201ENST00000456581 C2orf66Q6UXQ4 117 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 BAALCQ8WXS3 180 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 RPL39P62891 51 aaKnown RBP9.29□□□□□ -0.92
LINC00959-201ENST00000456581 PRADC1Q9BSG0 188 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 SMPXQ9UHP9 88 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 H3BUA1 57 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 H7C1H1 209 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 IGKV3-20P01619 116 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 LGALS1P09382 135 aaKnown RBP9.29□□□□□ -0.92
LINC00959-201ENST00000456581 PSMB8P28062 276 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 SMCPP49901 116 aaPredicted RBP9.29□□□□□ -0.92
LINC00959-201ENST00000456581 NEXN-AS1Q8NBZ9 246 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 ATP6V0BQ99437 205 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 RHPN1-AS1Q9BWJ2 59 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 PRO0461Q9UI25 63 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 MYMXA0A1B0GTQ4 84 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 OR11H12B2RN74 326 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 OR11H1Q8NG94 326 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 OR11H2Q8NH07 326 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 GAGE12HA6NDE8 117 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 RNASE3P12724 160 aaKnown RBP9.28□□□□□ -0.92
LINC00959-201ENST00000456581 PLNP26678 52 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 FHL3Q13643 280 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 IGHV4-4A0A075B6R2 117 aa9.27□□□□□ -0.92
LINC00959-201ENST00000456581 J3QLI3 93 aa9.27□□□□□ -0.92
LINC00959-201ENST00000456581 FSHBP01225 129 aa9.27□□□□□ -0.92
LINC00959-201ENST00000456581 TOMM6Q96B49 74 aa9.27□□□□□ -0.92
LINC00959-201ENST00000456581 VPREB3Q9UKI3 123 aa9.27□□□□□ -0.92
LINC00959-201ENST00000456581 ASIPP42127 132 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 Q6YL49 198 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 C18orf65Q6ZTR6 163 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 OR10J6PQ8NGY7 276 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 ZNF815PA8K554 130 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 SOCS3O14543 225 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 TSHBP01222 138 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 C9orf139Q6ZV77 190 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 OPRPNQ99935 248 aaPredicted RBP9.27□□□□□ -0.93
LINC00959-201ENST00000456581 DPH3P1Q9H4G8 78 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 PGPEP1Q9NXJ5 209 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 APOMO95445 188 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 CRYGDP07320 174 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 SCGB2A2Q13296 93 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 FAM74A4Q5TZK3 123 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 SCGB1D4Q6XE38 83 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 NFE4Q86UQ8 179 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 MRPL53Q96EL3 112 aaKnown RBP9.26□□□□□ -0.93
LINC00959-201ENST00000456581 MRAP2Q96G30 205 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 ZNF702PQ9H963 129 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 LINC01549A6NIU2 74 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 PRSS47A8MTI9 375 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 SCGB1A1P11684 91 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 RRN3P1Q2M238 152 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 SETXQ7Z333 2677 aaKnown RBP9.25□□□□□ -0.93
LINC00959-201ENST00000456581 TRAV12-2A0A075B6T6 113 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 TRAV21A0A0B4J279 112 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 A0A1B0GWB2 263 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 C11orf86A6NJI1 115 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 BRI3O95415 125 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 DEFB136Q30KP8 78 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 ZNF418Q8TF45 676 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms