RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 GATA3P23771 443 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 S100A4P26447 101 aaKnown RBP9.33□□□□□ -0.92
LINC00959-201ENST00000456581 PLEKHB2Q96CS7 222 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 SCGB3A1Q96QR1 104 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 SPAG8Q99932 426 aaPredicted RBP9.33□□□□□ -0.92
LINC00959-201ENST00000456581 IGLV1-40P01703 118 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 ANXA2RQ3ZCQ2 193 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 C9orf47Q6ZRZ4 202 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 ZFAND2AQ8N6M9 145 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 SVIPQ8NHG7 77 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 ZNF479Q96JC4 524 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 SPANXB1Q9NS25 103 aaPredicted RBP9.33□□□□□ -0.92
LINC00959-201ENST00000456581 HIGD1BQ9P298 99 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 NACAE9PAV3 2078 aa9.33□□□□□ -0.92
LINC00959-201ENST00000456581 E9PLD3 99 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 TM2D2Q9BX73 214 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 C2CD3Q4AC94 2353 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 CFHR3Q02985 330 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 KRTAP1-3Q8IUG1 177 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 PTH2Q96A98 100 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 USMG5Q96IX5 58 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 NDUFA4O00483 81 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 SAMD13Q5VXD3 122 aa9.32□□□□□ -0.92
LINC00959-201ENST00000456581 HLA-DRB4P13762 266 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 SUMO2P61956 95 aaKnown RBP9.31□□□□□ -0.92
LINC00959-201ENST00000456581 FOXI2Q6ZQN5 318 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 PHLDA3Q9Y5J5 127 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 HLA-DRB4X5D2U9 266 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 HOXA3O43365 443 aaPredicted RBP9.31□□□□□ -0.92
LINC00959-201ENST00000456581 MORN3Q6PF18 240 aaPredicted RBP9.31□□□□□ -0.92
LINC00959-201ENST00000456581 ZFP2Q6ZN57 461 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 WFDC11Q8NEX6 87 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 C20orf78Q9BR46 151 aa9.31□□□□□ -0.92
LINC00959-201ENST00000456581 F8VRH5 84 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 DUSP14O95147 198 aaKnown RBP9.3□□□□□ -0.92
LINC00959-201ENST00000456581 JMJD1CQ15652 2540 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 TRBV7-3A0A075B6L6 115 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 A0A087WWL8 130 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 CD300EQ496F6 205 aaPredicted RBP9.3□□□□□ -0.92
LINC00959-201ENST00000456581 C2orf66Q6UXQ4 117 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 BAALCQ8WXS3 180 aa9.3□□□□□ -0.92
LINC00959-201ENST00000456581 RPL39P62891 51 aaKnown RBP9.29□□□□□ -0.92
LINC00959-201ENST00000456581 PRADC1Q9BSG0 188 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 SMPXQ9UHP9 88 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 H3BUA1 57 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 H7C1H1 209 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 IGKV3-20P01619 116 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 LGALS1P09382 135 aaKnown RBP9.29□□□□□ -0.92
LINC00959-201ENST00000456581 PSMB8P28062 276 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 SMCPP49901 116 aaPredicted RBP9.29□□□□□ -0.92
LINC00959-201ENST00000456581 NEXN-AS1Q8NBZ9 246 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 ATP6V0BQ99437 205 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 RHPN1-AS1Q9BWJ2 59 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 PRO0461Q9UI25 63 aa9.29□□□□□ -0.92
LINC00959-201ENST00000456581 MYMXA0A1B0GTQ4 84 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 OR11H12B2RN74 326 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 OR11H1Q8NG94 326 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 OR11H2Q8NH07 326 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 GAGE12HA6NDE8 117 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 RNASE3P12724 160 aaKnown RBP9.28□□□□□ -0.92
LINC00959-201ENST00000456581 PLNP26678 52 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 FHL3Q13643 280 aa9.28□□□□□ -0.92
LINC00959-201ENST00000456581 IGHV4-4A0A075B6R2 117 aa9.27□□□□□ -0.92
LINC00959-201ENST00000456581 J3QLI3 93 aa9.27□□□□□ -0.92
LINC00959-201ENST00000456581 FSHBP01225 129 aa9.27□□□□□ -0.92
LINC00959-201ENST00000456581 TOMM6Q96B49 74 aa9.27□□□□□ -0.92
LINC00959-201ENST00000456581 VPREB3Q9UKI3 123 aa9.27□□□□□ -0.92
LINC00959-201ENST00000456581 ASIPP42127 132 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 Q6YL49 198 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 C18orf65Q6ZTR6 163 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 OR10J6PQ8NGY7 276 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 ZNF815PA8K554 130 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 SOCS3O14543 225 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 TSHBP01222 138 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 C9orf139Q6ZV77 190 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 OPRPNQ99935 248 aaPredicted RBP9.27□□□□□ -0.93
LINC00959-201ENST00000456581 DPH3P1Q9H4G8 78 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 PGPEP1Q9NXJ5 209 aa9.27□□□□□ -0.93
LINC00959-201ENST00000456581 APOMO95445 188 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 CRYGDP07320 174 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 SCGB2A2Q13296 93 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 FAM74A4Q5TZK3 123 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 SCGB1D4Q6XE38 83 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 NFE4Q86UQ8 179 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 MRPL53Q96EL3 112 aaKnown RBP9.26□□□□□ -0.93
LINC00959-201ENST00000456581 MRAP2Q96G30 205 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 ZNF702PQ9H963 129 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 LINC01549A6NIU2 74 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 PRSS47A8MTI9 375 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 SCGB1A1P11684 91 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 RRN3P1Q2M238 152 aa9.26□□□□□ -0.93
LINC00959-201ENST00000456581 SETXQ7Z333 2677 aaKnown RBP9.25□□□□□ -0.93
LINC00959-201ENST00000456581 TRAV12-2A0A075B6T6 113 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 TRAV21A0A0B4J279 112 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 A0A1B0GWB2 263 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 C11orf86A6NJI1 115 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 BRI3O95415 125 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 DEFB136Q30KP8 78 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 ZNF418Q8TF45 676 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms