RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 SAMD10Q9BYL1 202 aa11.95□□□□□ -0.5
COL13A1-206ENST00000456019 SCRT2Q9NQ03 307 aa11.95□□□□□ -0.5
COL13A1-206ENST00000456019 A0A087WTM6 91 aa11.94□□□□□ -0.5
COL13A1-206ENST00000456019 GAGE12JA6NER3 117 aa11.94□□□□□ -0.5
COL13A1-206ENST00000456019 GAGE1Q13065 139 aa11.94□□□□□ -0.5
COL13A1-206ENST00000456019 GAGE4Q13068 117 aa11.94□□□□□ -0.5
COL13A1-206ENST00000456019 GAGE5Q13069 117 aa11.94□□□□□ -0.5
COL13A1-206ENST00000456019 GAGE13Q4V321 117 aa11.94□□□□□ -0.5
COL13A1-206ENST00000456019 CDPF1Q6NVV7 123 aa11.94□□□□□ -0.5
COL13A1-206ENST00000456019 IBA57-AS1B1ANH7 110 aa11.93□□□□□ -0.5
COL13A1-206ENST00000456019 LINC00694P0DN24 101 aa11.93□□□□□ -0.5
COL13A1-206ENST00000456019 ALKAL2Q6UX46 152 aa11.93□□□□□ -0.5
COL13A1-206ENST00000456019 ZFP82Q8N141 532 aa11.93□□□□□ -0.5
COL13A1-206ENST00000456019 SFRP2Q96HF1 295 aa11.93□□□□□ -0.5
COL13A1-206ENST00000456019 M0R381 172 aa11.92□□□□□ -0.5
COL13A1-206ENST00000456019 FAM74A4Q5TZK3 123 aa11.92□□□□□ -0.5
COL13A1-206ENST00000456019 BAGE2Q86Y30 109 aa11.92□□□□□ -0.5
COL13A1-206ENST00000456019 C14orf178Q8N769 122 aaPredicted RBP11.92□□□□□ -0.5
COL13A1-206ENST00000456019 MAPKAPK5-AS1Q8N8E1 139 aa11.92□□□□□ -0.5
COL13A1-206ENST00000456019 MLST8Q9BVC4 326 aa11.92□□□□□ -0.5
COL13A1-206ENST00000456019 HSPG2P98160 4391 aa11.91□□□□□ -0.5
COL13A1-206ENST00000456019 IGHV3-30P01768 117 aa11.91□□□□□ -0.5
COL13A1-206ENST00000456019 IGHV3-33P01772 117 aa11.91□□□□□ -0.5
COL13A1-206ENST00000456019 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
COL13A1-206ENST00000456019 IGHV3-30-5P0DP03 117 aa11.91□□□□□ -0.5
COL13A1-206ENST00000456019 MANBALQ9NQG1 85 aa11.91□□□□□ -0.5
COL13A1-206ENST00000456019 A0A087WWL8 130 aa11.9□□□□□ -0.5
COL13A1-206ENST00000456019 PSCAO43653 123 aa11.9□□□□□ -0.5
COL13A1-206ENST00000456019 CXCL1P09341 107 aa11.9□□□□□ -0.5
COL13A1-206ENST00000456019 Q9UF83 564 aa11.9□□□□□ -0.5
COL13A1-206ENST00000456019 A0A087WWC5 75 aa11.89□□□□□ -0.51
COL13A1-206ENST00000456019 TEX46H3BTG2 121 aa11.89□□□□□ -0.51
COL13A1-206ENST00000456019 KRTAP4-5Q9BYR2 181 aa11.89□□□□□ -0.51
COL13A1-206ENST00000456019 GNG13Q9P2W3 67 aa11.89□□□□□ -0.51
COL13A1-206ENST00000456019 DNAH5Q8TE73 4624 aa11.88□□□□□ -0.51
COL13A1-206ENST00000456019 FUSP35637 526 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL13A1-206ENST00000456019 RPL35P42766 123 aaKnown RBP11.88□□□□□ -0.51
COL13A1-206ENST00000456019 LAGE3Q14657 143 aa11.88□□□□□ -0.51
COL13A1-206ENST00000456019 LYPD6BQ8NI32 183 aa11.88□□□□□ -0.51
COL13A1-206ENST00000456019 Q9HAA7 133 aa11.88□□□□□ -0.51
COL13A1-206ENST00000456019 RPL19P84098 196 aaKnown RBP11.87□□□□□ -0.51
COL13A1-206ENST00000456019 PRR27Q6MZM9 219 aa11.87□□□□□ -0.51
COL13A1-206ENST00000456019 C11orf52Q96A22 123 aa11.87□□□□□ -0.51
COL13A1-206ENST00000456019 APOBP04114 4563 aaKnown RBP11.86□□□□□ -0.51
COL13A1-206ENST00000456019 TRBV10-1A0A0K0K1A3 114 aa11.86□□□□□ -0.51
COL13A1-206ENST00000456019 BLOC1S1P78537 153 aa11.86□□□□□ -0.51
COL13A1-206ENST00000456019 Q8N1X5 172 aa11.86□□□□□ -0.51
COL13A1-206ENST00000456019 ABCA13Q86UQ4 5058 aa11.85□□□□□ -0.51
COL13A1-206ENST00000456019 LRCOL1A6NCL2 159 aa11.85□□□□□ -0.51
COL13A1-206ENST00000456019 SNAI2O43623 268 aa11.85□□□□□ -0.51
COL13A1-206ENST00000456019 OR10AG1Q8NH19 301 aa11.85□□□□□ -0.51
COL13A1-206ENST00000456019 DERL1Q9BUN8 251 aa11.85□□□□□ -0.51
COL13A1-206ENST00000456019 SSBP4Q9BWG4 385 aaPredicted RBP11.85□□□□□ -0.51
COL13A1-206ENST00000456019 OR5AL1P0C617 328 aa11.84□□□□□ -0.51
COL13A1-206ENST00000456019 RPL36AP83881 106 aaKnown RBP11.84□□□□□ -0.51
COL13A1-206ENST00000456019 TEX261Q6UWH6 196 aa11.84□□□□□ -0.51
COL13A1-206ENST00000456019 Q8N3U1 123 aa11.84□□□□□ -0.51
COL13A1-206ENST00000456019 RPL36ALQ969Q0 106 aaKnown RBP11.84□□□□□ -0.51
COL13A1-206ENST00000456019 TM2D2Q9BX73 214 aa11.84□□□□□ -0.51
COL13A1-206ENST00000456019 TRBV7-3A0A075B6L6 115 aa11.83□□□□□ -0.52
COL13A1-206ENST00000456019 TRAV8-3A0A0A6YYJ7 113 aa11.83□□□□□ -0.52
COL13A1-206ENST00000456019 BCL2P10415 239 aa11.83□□□□□ -0.52
COL13A1-206ENST00000456019 RAB4BP61018 213 aa11.83□□□□□ -0.52
COL13A1-206ENST00000456019 CENPWQ5EE01 88 aa11.83□□□□□ -0.52
COL13A1-206ENST00000456019 TOR2AQ5JU69 321 aa11.83□□□□□ -0.52
COL13A1-206ENST00000456019 SPANXN1Q5VSR9 72 aa11.83□□□□□ -0.52
COL13A1-206ENST00000456019 PDE6DO43924 150 aa11.82□□□□□ -0.52
COL13A1-206ENST00000456019 IFNA1P01562 189 aa11.82□□□□□ -0.52
COL13A1-206ENST00000456019 UBE2D3P61077 147 aa11.82□□□□□ -0.52
COL13A1-206ENST00000456019 UBE2D2P62837 147 aa11.82□□□□□ -0.52
COL13A1-206ENST00000456019 MEF2BQ02080 365 aaPredicted RBP11.82□□□□□ -0.52
COL13A1-206ENST00000456019 ZNF56Q15929 161 aa11.82□□□□□ -0.52
COL13A1-206ENST00000456019 DAZ4Q86SG3 579 aaKnown RBP11.82□□□□□ -0.52
COL13A1-206ENST00000456019 NTN5Q8WTR8 489 aaPredicted RBP11.82□□□□□ -0.52
COL13A1-206ENST00000456019 DAZ3Q9NR90 486 aaKnown RBP11.82□□□□□ -0.52
COL13A1-206ENST00000456019 URGCP-MRPS24S4R325 110 aa11.82□□□□□ -0.52
COL13A1-206ENST00000456019 GCSHP23434 173 aa11.81□□□□□ -0.52
COL13A1-206ENST00000456019 TAGLN2P37802 199 aaKnown RBP11.81□□□□□ -0.52
COL13A1-206ENST00000456019 KRTAP10-1P60331 282 aa11.81□□□□□ -0.52
COL13A1-206ENST00000456019 OR10G8Q8NGN5 311 aa11.81□□□□□ -0.52
COL13A1-206ENST00000456019 DAZAP1Q96EP5 407 aaKnown RBP11.81□□□□□ -0.52
COL13A1-206ENST00000456019 SMIM12Q96EX1 92 aa11.81□□□□□ -0.52
COL13A1-206ENST00000456019 VAX2Q9UIW0 290 aa11.81□□□□□ -0.52
COL13A1-206ENST00000456019 IGLV5-52A0A0A0MRZ9 124 aa11.8□□□□□ -0.52
COL13A1-206ENST00000456019 MUC21A0A0G2JKD1 596 aa11.8□□□□□ -0.52
COL13A1-206ENST00000456019 MUC21A0A140T8X8 626 aa11.8□□□□□ -0.52
COL13A1-206ENST00000456019 GNG4P50150 75 aa11.8□□□□□ -0.52
COL13A1-206ENST00000456019 NIT1Q86X76 327 aa11.8□□□□□ -0.52
COL13A1-206ENST00000456019 Q8N814 137 aa11.8□□□□□ -0.52
COL13A1-206ENST00000456019 RAB19A4D1S5 217 aa11.79□□□□□ -0.52
COL13A1-206ENST00000456019 IGLV2-8P01709 118 aa11.79□□□□□ -0.52
COL13A1-206ENST00000456019 RPS20P60866 119 aaKnown RBP11.79□□□□□ -0.52
COL13A1-206ENST00000456019 CHCHD7Q9BUK0 85 aa11.79□□□□□ -0.52
COL13A1-206ENST00000456019 F5H697 171 aa11.78□□□□□ -0.52
COL13A1-206ENST00000456019 SMIM17P0DL12 118 aa11.78□□□□□ -0.52
COL13A1-206ENST00000456019 XGP55808 180 aa11.78□□□□□ -0.52
COL13A1-206ENST00000456019 SSTP61278 116 aa11.78□□□□□ -0.52
COL13A1-206ENST00000456019 KCNIP4Q6PIL6 250 aa11.78□□□□□ -0.52
COL13A1-206ENST00000456019 NEXN-AS1Q8NBZ9 246 aa11.78□□□□□ -0.52
COL13A1-206ENST00000456019 OR2D3Q8NGH3 330 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms