RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ZNF674Q2M3X9 581 aa10.52□□□□□ -0.73
GPC1-206ENST00000455111 SFRP2Q96HF1 295 aa10.52□□□□□ -0.73
GPC1-206ENST00000455111 HMCN2Q8NDA2 5059 aa10.51□□□□□ -0.73
GPC1-206ENST00000455111 TMSB15BA0A087X1C1 80 aa10.51□□□□□ -0.73
GPC1-206ENST00000455111 IFNA7P01567 189 aa10.51□□□□□ -0.73
GPC1-206ENST00000455111 LINC01559Q495D7 138 aa10.51□□□□□ -0.73
GPC1-206ENST00000455111 LTAP01374 205 aa10.5□□□□□ -0.73
GPC1-206ENST00000455111 FAM74A4Q5TZK3 123 aa10.5□□□□□ -0.73
GPC1-206ENST00000455111 HIST1H2BAQ96A08 127 aa10.5□□□□□ -0.73
GPC1-206ENST00000455111 TM2D2Q9BX73 214 aa10.5□□□□□ -0.73
GPC1-206ENST00000455111 BOLA1Q9Y3E2 137 aa10.5□□□□□ -0.73
GPC1-206ENST00000455111 TRAV8-3A0A0A6YYJ7 113 aa10.49□□□□□ -0.73
GPC1-206ENST00000455111 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
GPC1-206ENST00000455111 MAP1LC3B2A6NCE7 125 aa10.49□□□□□ -0.73
GPC1-206ENST00000455111 SMLR1H3BR10 107 aa10.49□□□□□ -0.73
GPC1-206ENST00000455111 SCXQ7RTU7 201 aa10.49□□□□□ -0.73
GPC1-206ENST00000455111 LINC00528Q8N1L1 170 aa10.49□□□□□ -0.73
GPC1-206ENST00000455111 INO80EQ8NBZ0 244 aaPredicted RBP10.49□□□□□ -0.73
GPC1-206ENST00000455111 MAP1LC3BQ9GZQ8 125 aa10.49□□□□□ -0.73
GPC1-206ENST00000455111 BORCS7-ASMTA0A0B4J1R7 106 aa10.48□□□□□ -0.73
GPC1-206ENST00000455111 M0R381 172 aa10.48□□□□□ -0.73
GPC1-206ENST00000455111 UBE2D3P61077 147 aa10.48□□□□□ -0.73
GPC1-206ENST00000455111 UBE2D2P62837 147 aa10.48□□□□□ -0.73
GPC1-206ENST00000455111 RPL19P84098 196 aaKnown RBP10.48□□□□□ -0.73
GPC1-206ENST00000455111 OR11H4Q8NGC9 324 aa10.48□□□□□ -0.73
GPC1-206ENST00000455111 KLK12Q9UKR0 248 aa10.48□□□□□ -0.73
GPC1-206ENST00000455111 ZFP30Q9Y2G7 519 aa10.48□□□□□ -0.73
GPC1-206ENST00000455111 RHODO00212 210 aa10.47□□□□□ -0.73
GPC1-206ENST00000455111 FAM162BQ5T6X4 162 aa10.47□□□□□ -0.73
GPC1-206ENST00000455111 ATRAIDQ6UW56 229 aa10.47□□□□□ -0.73
GPC1-206ENST00000455111 FMC1Q96HJ9 113 aa10.47□□□□□ -0.73
GPC1-206ENST00000455111 A0A087WWC5 75 aa10.46□□□□□ -0.73
GPC1-206ENST00000455111 ARPC5O15511 151 aa10.46□□□□□ -0.73
GPC1-206ENST00000455111 AKR1C8PQ5T2L2 129 aa10.46□□□□□ -0.73
GPC1-206ENST00000455111 ENHOQ6UWT2 76 aa10.46□□□□□ -0.73
GPC1-206ENST00000455111 NKX6-2Q9C056 277 aaPredicted RBP10.46□□□□□ -0.73
GPC1-206ENST00000455111 BATF3Q9NR55 127 aa10.46□□□□□ -0.73
GPC1-206ENST00000455111 PRR27Q6MZM9 219 aa10.45□□□□□ -0.74
GPC1-206ENST00000455111 SYT8Q8NBV8 401 aa10.45□□□□□ -0.74
GPC1-206ENST00000455111 OR10G8Q8NGN5 311 aa10.45□□□□□ -0.74
GPC1-206ENST00000455111 OR10AG1Q8NH19 301 aa10.45□□□□□ -0.74
GPC1-206ENST00000455111 MLST8Q9BVC4 326 aa10.45□□□□□ -0.74
GPC1-206ENST00000455111 PHLDA3Q9Y5J5 127 aa10.45□□□□□ -0.74
GPC1-206ENST00000455111 IGKV2D-24A0A075B6R9 120 aa10.44□□□□□ -0.74
GPC1-206ENST00000455111 KRTAP29-1A8MX34 341 aaPredicted RBP10.44□□□□□ -0.74
GPC1-206ENST00000455111 PAGE4O60829 102 aa10.44□□□□□ -0.74
GPC1-206ENST00000455111 TPT1P13693 172 aaKnown RBP10.44□□□□□ -0.74
GPC1-206ENST00000455111 NEXN-AS1Q8NBZ9 246 aa10.44□□□□□ -0.74
GPC1-206ENST00000455111 UBE2WQ96B02 151 aa10.44□□□□□ -0.74
GPC1-206ENST00000455111 MUC21A0A0G2JKD1 596 aa10.43□□□□□ -0.74
GPC1-206ENST00000455111 TRBV10-1A0A0K0K1A3 114 aa10.43□□□□□ -0.74
GPC1-206ENST00000455111 MUC21A0A140T8X8 626 aa10.43□□□□□ -0.74
GPC1-206ENST00000455111 SCO2A0A1W2PP80 73 aa10.43□□□□□ -0.74
GPC1-206ENST00000455111 UBE2G1P62253 170 aa10.43□□□□□ -0.74
GPC1-206ENST00000455111 TOR2AQ5JU69 321 aa10.43□□□□□ -0.74
GPC1-206ENST00000455111 NTM-AS1Q6ZSK4 140 aa10.43□□□□□ -0.74
GPC1-206ENST00000455111 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
GPC1-206ENST00000455111 KIF25-AS1Q9Y6Z4 181 aa10.43□□□□□ -0.74
GPC1-206ENST00000455111 TRBV7-3A0A075B6L6 115 aa10.42□□□□□ -0.74
GPC1-206ENST00000455111 SNAI2O43623 268 aa10.42□□□□□ -0.74
GPC1-206ENST00000455111 MPV17L2Q567V2 206 aa10.42□□□□□ -0.74
GPC1-206ENST00000455111 CST9LP1Q5W188 147 aa10.42□□□□□ -0.74
GPC1-206ENST00000455111 ZFP82Q8N141 532 aa10.42□□□□□ -0.74
GPC1-206ENST00000455111 MBD3L1Q8WWY6 194 aa10.42□□□□□ -0.74
GPC1-206ENST00000455111 SSBP4Q9BWG4 385 aaPredicted RBP10.42□□□□□ -0.74
GPC1-206ENST00000455111 A0A1B0GV50 99 aa10.41□□□□□ -0.74
GPC1-206ENST00000455111 RBFOX3A6NFN3 312 aa10.41□□□□□ -0.74
GPC1-206ENST00000455111 AKR1C3P42330 323 aa10.41□□□□□ -0.74
GPC1-206ENST00000455111 KRTAP26-1Q6PEX3 210 aa10.41□□□□□ -0.74
GPC1-206ENST00000455111 CHCHD7Q9BUK0 85 aa10.41□□□□□ -0.74
GPC1-206ENST00000455111 CHAC1Q9BUX1 264 aa10.41□□□□□ -0.74
GPC1-206ENST00000455111 TRBV6-8A0A0A6YYG3 113 aa10.4□□□□□ -0.74
GPC1-206ENST00000455111 PLA2G1BP04054 148 aaKnown RBP10.4□□□□□ -0.74
GPC1-206ENST00000455111 RPL36AP83881 106 aaKnown RBP10.4□□□□□ -0.74
GPC1-206ENST00000455111 KCNRGQ8N5I3 272 aa10.4□□□□□ -0.74
GPC1-206ENST00000455111 Q8N976 141 aa10.4□□□□□ -0.74
GPC1-206ENST00000455111 RPL36ALQ969Q0 106 aaKnown RBP10.4□□□□□ -0.74
GPC1-206ENST00000455111 COX11Q9Y6N1 276 aa10.4□□□□□ -0.74
GPC1-206ENST00000455111 RAB4BP61018 213 aa10.39□□□□□ -0.75
GPC1-206ENST00000455111 TCEAL7Q9BRU2 100 aa10.39□□□□□ -0.75
GPC1-206ENST00000455111 URGCP-MRPS24S4R325 110 aa10.39□□□□□ -0.75
GPC1-206ENST00000455111 A0A087WX48 190 aa10.38□□□□□ -0.75
GPC1-206ENST00000455111 J3QL48 77 aa10.38□□□□□ -0.75
GPC1-206ENST00000455111 CXCL1P09341 107 aa10.38□□□□□ -0.75
GPC1-206ENST00000455111 HNRNPA3P51991 378 aaKnown RBP10.38□□□□□ -0.75
GPC1-206ENST00000455111 CCL20P78556 96 aa10.38□□□□□ -0.75
GPC1-206ENST00000455111 RMI2Q96E14 147 aa10.38□□□□□ -0.75
GPC1-206ENST00000455111 UBR4Q5T4S7 5183 aa10.37□□□□□ -0.75
GPC1-206ENST00000455111 PANO1I0J062 215 aa10.37□□□□□ -0.75
GPC1-206ENST00000455111 OR5AL1P0C617 328 aa10.37□□□□□ -0.75
GPC1-206ENST00000455111 SEC11BP0C7V7 166 aa10.37□□□□□ -0.75
GPC1-206ENST00000455111 ZNF56Q15929 161 aa10.37□□□□□ -0.75
GPC1-206ENST00000455111 C15orf54Q8N8G6 183 aa10.37□□□□□ -0.75
GPC1-206ENST00000455111 STOML3Q8TAV4 291 aa10.37□□□□□ -0.75
GPC1-206ENST00000455111 FAM213BQ8TBF2 198 aa10.37□□□□□ -0.75
GPC1-206ENST00000455111 SFT2D1Q8WV19 159 aa10.37□□□□□ -0.75
GPC1-206ENST00000455111 DERL1Q9BUN8 251 aa10.37□□□□□ -0.75
GPC1-206ENST00000455111 IGLV2-8P01709 118 aa10.36□□□□□ -0.75
GPC1-206ENST00000455111 ZNF345Q14585 488 aa10.36□□□□□ -0.75
GPC1-206ENST00000455111 BAGE2Q86Y30 109 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms