RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 GNG4P50150 75 aa16.9■□□□□ 0.3
MSH2-203ENST00000454849 ATP6V0E2Q8NHE4 81 aa16.9■□□□□ 0.3
MSH2-203ENST00000454849 TRBV20OR9-2A0A075B6H5 130 aa16.89■□□□□ 0.29
MSH2-203ENST00000454849 PKHD1P08F94 4074 aa16.88■□□□□ 0.29
MSH2-203ENST00000454849 OR10J3Q5JRS4 329 aa16.88■□□□□ 0.29
MSH2-203ENST00000454849 DAZAP1Q96EP5 407 aaKnown RBP16.87■□□□□ 0.29
MSH2-203ENST00000454849 TPPP3Q9BW30 176 aa16.87■□□□□ 0.29
MSH2-203ENST00000454849 RHODO00212 210 aa16.86■□□□□ 0.29
MSH2-203ENST00000454849 EVI2AP22794 236 aa16.86■□□□□ 0.29
MSH2-203ENST00000454849 TIRAPP58753 221 aa16.86■□□□□ 0.29
MSH2-203ENST00000454849 BLOC1S1P78537 153 aa16.86■□□□□ 0.29
MSH2-203ENST00000454849 OR2D3Q8NGH3 330 aa16.86■□□□□ 0.29
MSH2-203ENST00000454849 GTSF1LQ9H1H1 148 aa16.86■□□□□ 0.29
MSH2-203ENST00000454849 TRAV9-2A0A087WT02 112 aa16.85■□□□□ 0.29
MSH2-203ENST00000454849 RBFOX3A6NFN3 312 aa16.85■□□□□ 0.29
MSH2-203ENST00000454849 DNAH10OSP0CZ25 163 aa16.85■□□□□ 0.29
MSH2-203ENST00000454849 MED14OSP0DP75 135 aa16.85■□□□□ 0.29
MSH2-203ENST00000454849 SPANXN1Q5VSR9 72 aa16.85■□□□□ 0.29
MSH2-203ENST00000454849 TRAV8-6A0A0B4J262 113 aa16.84■□□□□ 0.29
MSH2-203ENST00000454849 IGHV3-38A0A0C4DH36 116 aa16.84■□□□□ 0.29
MSH2-203ENST00000454849 IGHV3-30P01768 117 aa16.84■□□□□ 0.29
MSH2-203ENST00000454849 IGHV3-33P01772 117 aa16.84■□□□□ 0.29
MSH2-203ENST00000454849 IGHV3-30-3P0DP02 117 aa16.84■□□□□ 0.29
MSH2-203ENST00000454849 IGHV3-30-5P0DP03 117 aa16.84■□□□□ 0.29
MSH2-203ENST00000454849 Q6ZRN7 208 aaPredicted RBP16.84■□□□□ 0.29
MSH2-203ENST00000454849 C19orf71A6NCJ1 209 aa16.83■□□□□ 0.28
MSH2-203ENST00000454849 SNAI2O43623 268 aa16.83■□□□□ 0.28
MSH2-203ENST00000454849 CXCL1P09341 107 aa16.83■□□□□ 0.28
MSH2-203ENST00000454849 LINC00694P0DN24 101 aa16.83■□□□□ 0.28
MSH2-203ENST00000454849 LELP1Q5T871 98 aa16.83■□□□□ 0.28
MSH2-203ENST00000454849 SSBP4Q9BWG4 385 aaPredicted RBP16.83■□□□□ 0.28
MSH2-203ENST00000454849 OR5AL1P0C617 328 aa16.82■□□□□ 0.28
MSH2-203ENST00000454849 Q8N3U1 123 aa16.82■□□□□ 0.28
MSH2-203ENST00000454849 MSRB1Q9NZV6 116 aa16.82■□□□□ 0.28
MSH2-203ENST00000454849 TAGLN2P37802 199 aaKnown RBP16.81■□□□□ 0.28
MSH2-203ENST00000454849 CEBPGP53567 150 aa16.81■□□□□ 0.28
MSH2-203ENST00000454849 SPATA12Q7Z6I5 190 aa16.81■□□□□ 0.28
MSH2-203ENST00000454849 P01737 135 aa16.8■□□□□ 0.28
MSH2-203ENST00000454849 ZNF56Q15929 161 aa16.8■□□□□ 0.28
MSH2-203ENST00000454849 KIAA1109Q2LD37 5005 aa16.79■□□□□ 0.28
MSH2-203ENST00000454849 C16orf90A8MZG2 172 aa16.79■□□□□ 0.28
MSH2-203ENST00000454849 FUSP35637 526 aaKnown RBP eCLIP16.79■□□□□ 0.282e-10■□□□□ 9.8
MSH2-203ENST00000454849 FER1L6-AS1Q8NA97 138 aa16.79■□□□□ 0.28
MSH2-203ENST00000454849 LYPD6BQ8NI32 183 aa16.79■□□□□ 0.28
MSH2-203ENST00000454849 OCC1Q8TAD7 63 aa16.79■□□□□ 0.28
MSH2-203ENST00000454849 DNAH11Q96DT5 4516 aa16.78■□□□□ 0.28
MSH2-203ENST00000454849 F5H697 171 aa16.78■□□□□ 0.28
MSH2-203ENST00000454849 K7EN84 100 aa16.78■□□□□ 0.28
MSH2-203ENST00000454849 BTF3P20290 206 aaKnown RBP16.78■□□□□ 0.28
MSH2-203ENST00000454849 KRTAP10-2P60368 255 aa16.78■□□□□ 0.28
MSH2-203ENST00000454849 TOR2AQ5JU69 321 aa16.78■□□□□ 0.28
MSH2-203ENST00000454849 NUDT10Q8NFP7 164 aa16.78■□□□□ 0.28
MSH2-203ENST00000454849 NUDT11Q96G61 164 aa16.78■□□□□ 0.28
MSH2-203ENST00000454849 IGLC6P0CF74 106 aa16.77■□□□□ 0.28
MSH2-203ENST00000454849 RPS20P60866 119 aaKnown RBP16.77■□□□□ 0.28
MSH2-203ENST00000454849 LINC01556Q5JQF7 62 aa16.77■□□□□ 0.28
MSH2-203ENST00000454849 SMIM12Q96EX1 92 aa16.77■□□□□ 0.28
MSH2-203ENST00000454849 RNASE7Q9H1E1 156 aaKnown RBP16.77■□□□□ 0.28
MSH2-203ENST00000454849 DYNC1H1Q14204 4646 aaKnown RBP16.77■□□□□ 0.27
MSH2-203ENST00000454849 Q9HAA7 133 aa16.76■□□□□ 0.27
MSH2-203ENST00000454849 RAB4BP61018 213 aa16.75■□□□□ 0.27
MSH2-203ENST00000454849 NFE4Q86UQ8 179 aa16.75■□□□□ 0.27
MSH2-203ENST00000454849 EIF5A2Q9GZV4 153 aaKnown RBP16.75■□□□□ 0.27
MSH2-203ENST00000454849 BIN3Q9NQY0 253 aa16.75■□□□□ 0.27
MSH2-203ENST00000454849 LYZL1Q6UWQ5 148 aa16.74■□□□□ 0.27
MSH2-203ENST00000454849 C10orf126Q8N4M7 172 aa16.74■□□□□ 0.27
MSH2-203ENST00000454849 KIF25-AS1Q9Y6Z4 181 aa16.74■□□□□ 0.27
MSH2-203ENST00000454849 SMIM17P0DL12 118 aa16.73■□□□□ 0.27
MSH2-203ENST00000454849 RPL36AP83881 106 aaKnown RBP16.73■□□□□ 0.27
MSH2-203ENST00000454849 RPL36ALQ969Q0 106 aaKnown RBP16.73■□□□□ 0.27
MSH2-203ENST00000454849 TRBV10-1A0A0K0K1A3 114 aa16.72■□□□□ 0.27
MSH2-203ENST00000454849 TMEM250H0YL14 139 aa16.72■□□□□ 0.27
MSH2-203ENST00000454849 MGPP08493 103 aa16.72■□□□□ 0.27
MSH2-203ENST00000454849 UBE2D3P61077 147 aa16.72■□□□□ 0.27
MSH2-203ENST00000454849 UBE2D2P62837 147 aa16.72■□□□□ 0.27
MSH2-203ENST00000454849 NEXN-AS1Q8NBZ9 246 aa16.72■□□□□ 0.27
MSH2-203ENST00000454849 AP1S3Q96PC3 154 aa16.72■□□□□ 0.27
MSH2-203ENST00000454849 HERC2O95714 4834 aa16.72■□□□□ 0.27
MSH2-203ENST00000454849 TRBV7-3A0A075B6L6 115 aa16.71■□□□□ 0.27
MSH2-203ENST00000454849 XKRY2A2RUG3 117 aa16.71■□□□□ 0.27
MSH2-203ENST00000454849 IBA57-AS1B1ANH7 110 aa16.71■□□□□ 0.27
MSH2-203ENST00000454849 K7EP13 123 aa16.71■□□□□ 0.27
MSH2-203ENST00000454849 RPP21Q9H633 154 aaKnown RBP16.71■□□□□ 0.27
MSH2-203ENST00000454849 A0A087WWC5 75 aa16.7■□□□□ 0.26
MSH2-203ENST00000454849 DAZ4Q86SG3 579 aaKnown RBP16.7■□□□□ 0.26
MSH2-203ENST00000454849 DAZ3Q9NR90 486 aaKnown RBP16.7■□□□□ 0.26
MSH2-203ENST00000454849 ERVFC1-1P60608 527 aa16.69■□□□□ 0.26
MSH2-203ENST00000454849 CACNG7P62955 275 aa16.69■□□□□ 0.26
MSH2-203ENST00000454849 FAM210AQ96ND0 272 aa16.69■□□□□ 0.26
MSH2-203ENST00000454849 A0A087WTM6 91 aa16.67■□□□□ 0.26
MSH2-203ENST00000454849 F2Z2F3 143 aa16.67■□□□□ 0.26
MSH2-203ENST00000454849 NTF3P20783 257 aa16.67■□□□□ 0.26
MSH2-203ENST00000454849 OR10G8Q8NGN5 311 aa16.67■□□□□ 0.26
MSH2-203ENST00000454849 PSCAO43653 123 aa16.66■□□□□ 0.26
MSH2-203ENST00000454849 SRP19P09132 144 aaKnown RBP16.66■□□□□ 0.26
MSH2-203ENST00000454849 SMIM7Q9BQ49 75 aa16.66■□□□□ 0.26
MSH2-203ENST00000454849 EREGO14944 169 aa16.65■□□□□ 0.26
MSH2-203ENST00000454849 GATCO43716 136 aaKnown RBP16.65■□□□□ 0.26
MSH2-203ENST00000454849 TWIST1Q15672 202 aa16.64■□□□□ 0.25
MSH2-203ENST00000454849 SUMO4Q6EEV6 95 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms