RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 A0A1B0GXF2 115 aa8.61□□□□□ -1.03
DDR1-240ENST00000454612 RNASE13Q5GAN3 156 aaKnown RBP8.61□□□□□ -1.03
DDR1-240ENST00000454612 FAM110DQ8TAY7 271 aaPredicted RBP8.61□□□□□ -1.03
DDR1-240ENST00000454612 DYNLRB2Q8TF09 96 aa8.61□□□□□ -1.03
DDR1-240ENST00000454612 CELSR1Q9NYQ6 3014 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 TCTEX1D4Q5JR98 221 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 DGAT2L7PQ6IED9 249 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 LYPD1Q8N2G4 141 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 GFRA4Q9GZZ7 299 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 MYCNOSP40205 109 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 ID1P41134 155 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 IGHV1-69DA0A0B4J2H0 117 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 IGHV1-69P01742 117 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 EDN2P20800 178 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 CEND1Q8N111 149 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 EDA2RQ9HAV5 297 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 SMAD5-AS1Q9Y6J3 95 aa8.6□□□□□ -1.03
DDR1-240ENST00000454612 FOXI1Q12951 378 aa8.59□□□□□ -1.03
DDR1-240ENST00000454612 CT83Q5H943 113 aa8.59□□□□□ -1.03
DDR1-240ENST00000454612 TRAV2A0A0B4J234 112 aa8.59□□□□□ -1.03
DDR1-240ENST00000454612 PRM2P04554 102 aa8.59□□□□□ -1.03
DDR1-240ENST00000454612 COX6B1P14854 86 aa8.59□□□□□ -1.03
DDR1-240ENST00000454612 PDE6HQ13956 83 aa8.59□□□□□ -1.03
DDR1-240ENST00000454612 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
DDR1-240ENST00000454612 TRBV25-1A0A075B6N4 114 aa8.59□□□□□ -1.04
DDR1-240ENST00000454612 TRAV21A0A0B4J279 112 aa8.59□□□□□ -1.04
DDR1-240ENST00000454612 KLF5Q13887 457 aaPredicted RBP8.59□□□□□ -1.04
DDR1-240ENST00000454612 C8orf31Q8N9H6 132 aa8.59□□□□□ -1.04
DDR1-240ENST00000454612 BBC3Q96PG8 261 aaPredicted RBP8.59□□□□□ -1.04
DDR1-240ENST00000454612 IGHV3-16A0A0C4DH30 117 aa8.58□□□□□ -1.04
DDR1-240ENST00000454612 TNFRSF13BO14836 293 aaPredicted RBP8.58□□□□□ -1.04
DDR1-240ENST00000454612 LGALS3P17931 250 aaKnown RBP8.58□□□□□ -1.04
DDR1-240ENST00000454612 LAGE3Q14657 143 aa8.58□□□□□ -1.04
DDR1-240ENST00000454612 UBE2E2Q96LR5 201 aa8.58□□□□□ -1.04
DDR1-240ENST00000454612 CCDC140Q96MF4 163 aa8.58□□□□□ -1.04
DDR1-240ENST00000454612 SPANXB1Q9NS25 103 aaPredicted RBP8.58□□□□□ -1.04
DDR1-240ENST00000454612 IGHV3-53P01767 116 aa8.58□□□□□ -1.04
DDR1-240ENST00000454612 WI2-2373I1.2A0A1W2PRP0 233 aa8.58□□□□□ -1.04
DDR1-240ENST00000454612 LGALS9BQ3B8N2 356 aa8.58□□□□□ -1.04
DDR1-240ENST00000454612 LGALS9CQ6DKI2 356 aa8.58□□□□□ -1.04
DDR1-240ENST00000454612 Q6ZUT4 128 aa8.58□□□□□ -1.04
DDR1-240ENST00000454612 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
DDR1-240ENST00000454612 LY6LH3BQJ8 138 aa8.57□□□□□ -1.04
DDR1-240ENST00000454612 LMO4P61968 165 aa8.57□□□□□ -1.04
DDR1-240ENST00000454612 SRSF1Q07955 248 aaKnown RBP eCLIP8.57□□□□□ -1.04
DDR1-240ENST00000454612 NPBQ8NG41 125 aa8.57□□□□□ -1.04
DDR1-240ENST00000454612 KIR2DL4Q99706 377 aa8.57□□□□□ -1.04
DDR1-240ENST00000454612 FSTL3O95633 263 aa8.57□□□□□ -1.04
DDR1-240ENST00000454612 GATA3P23771 443 aa8.57□□□□□ -1.04
DDR1-240ENST00000454612 PHLDA1Q8WV24 401 aaPredicted RBP8.57□□□□□ -1.04
DDR1-240ENST00000454612 SNRPD3P62318 126 aaKnown RBP8.56□□□□□ -1.04
DDR1-240ENST00000454612 RPL32P62910 135 aaKnown RBP8.56□□□□□ -1.04
DDR1-240ENST00000454612 RRN3P1Q2M238 152 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 HIST2H2BCQ6DN03 193 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 C15orf53Q8NAA6 179 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 C11orf21Q9P2W6 132 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 TRBV7-1A0A0A6YYK4 115 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 ADARB2-AS1A8MUL3 147 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 MSMBP08118 114 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 AJUBAQ96IF1 538 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 INS-IGF2F8WCM5 200 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 DEFB112Q30KQ8 113 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 ZNF843Q8N446 348 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 OR13C6PQ8NH95 151 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 SIRPDQ9H106 197 aa8.56□□□□□ -1.04
DDR1-240ENST00000454612 IGHV3-38A0A0C4DH36 116 aa8.55□□□□□ -1.04
DDR1-240ENST00000454612 HLA-DRB4P13762 266 aa8.55□□□□□ -1.04
DDR1-240ENST00000454612 LY6G5BQ8NDX9 201 aa8.55□□□□□ -1.04
DDR1-240ENST00000454612 KLHL30-AS1Q8NEE0 82 aa8.55□□□□□ -1.04
DDR1-240ENST00000454612 HLA-DRB4X5D2U9 266 aa8.55□□□□□ -1.04
DDR1-240ENST00000454612 NTN5Q8WTR8 489 aaPredicted RBP8.55□□□□□ -1.04
DDR1-240ENST00000454612 ERG28Q9UKR5 140 aa8.55□□□□□ -1.04
DDR1-240ENST00000454612 OOSP1A8MZH6 123 aa8.54□□□□□ -1.04
DDR1-240ENST00000454612 DEFB131AP59861 70 aa8.54□□□□□ -1.04
DDR1-240ENST00000454612 ZNF876PQ49A33 203 aa8.54□□□□□ -1.04
DDR1-240ENST00000454612 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
DDR1-240ENST00000454612 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
DDR1-240ENST00000454612 C5orf56Q8N8D9 126 aa8.54□□□□□ -1.04
DDR1-240ENST00000454612 LINC01587Q99440 93 aa8.54□□□□□ -1.04
DDR1-240ENST00000454612 FLNAP21333 2647 aaKnown RBP8.54□□□□□ -1.04
DDR1-240ENST00000454612 CRXO43186 299 aaPredicted RBP8.54□□□□□ -1.04
DDR1-240ENST00000454612 C2orf66Q6UXQ4 117 aa8.54□□□□□ -1.04
DDR1-240ENST00000454612 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
DDR1-240ENST00000454612 UFSP1Q6NVU6 142 aa8.53□□□□□ -1.04
DDR1-240ENST00000454612 C20orf173Q96LM9 149 aa8.53□□□□□ -1.04
DDR1-240ENST00000454612 IGKV2D-26A0A0A0MRZ7 120 aa8.53□□□□□ -1.04
DDR1-240ENST00000454612 C9orf139Q6ZV77 190 aa8.53□□□□□ -1.04
DDR1-240ENST00000454612 ZNF625Q96I27 306 aaPredicted RBP8.53□□□□□ -1.04
DDR1-240ENST00000454612 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
DDR1-240ENST00000454612 DAZ1Q9NQZ3 744 aaKnown RBP8.53□□□□□ -1.04
DDR1-240ENST00000454612 ODF3BA8MYP8 253 aa8.53□□□□□ -1.04
DDR1-240ENST00000454612 B4DSR2 109 aa8.53□□□□□ -1.04
DDR1-240ENST00000454612 SUMO2P61956 95 aaKnown RBP8.53□□□□□ -1.04
DDR1-240ENST00000454612 F8W735 103 aaPredicted RBP8.52□□□□□ -1.04
DDR1-240ENST00000454612 SLC25A20O43772 301 aa8.52□□□□□ -1.04
DDR1-240ENST00000454612 SLC25A16P16260 332 aa8.52□□□□□ -1.04
DDR1-240ENST00000454612 FBXL19-AS1Q494R0 122 aa8.52□□□□□ -1.04
DDR1-240ENST00000454612 TP53TG1Q9Y2A0 90 aa8.52□□□□□ -1.04
DDR1-240ENST00000454612 XGP55808 180 aa8.52□□□□□ -1.05
DDR1-240ENST00000454612 PMVKQ15126 192 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms