RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 P01737 135 aa9.7□□□□□ -0.86
HDAC4-205ENST00000454542 TTC32Q5I0X7 151 aa9.7□□□□□ -0.86
HDAC4-205ENST00000454542 LINC00336Q6ZUF6 198 aa9.7□□□□□ -0.86
HDAC4-205ENST00000454542 OR2D3Q8NGH3 330 aa9.7□□□□□ -0.86
HDAC4-205ENST00000454542 OCC1Q8TAD7 63 aa9.7□□□□□ -0.86
HDAC4-205ENST00000454542 DAZAP1Q96EP5 407 aaKnown RBP9.7□□□□□ -0.86
HDAC4-205ENST00000454542 EIF5A2Q9GZV4 153 aaKnown RBP9.7□□□□□ -0.86
HDAC4-205ENST00000454542 PKD1P98161 4303 aa9.7□□□□□ -0.86
HDAC4-205ENST00000454542 DNAH11Q96DT5 4516 aa9.7□□□□□ -0.86
HDAC4-205ENST00000454542 GZMBP10144 247 aa9.69□□□□□ -0.86
HDAC4-205ENST00000454542 CTRLP40313 264 aa9.69□□□□□ -0.86
HDAC4-205ENST00000454542 FAM231DQ6ZW35 169 aa9.69□□□□□ -0.86
HDAC4-205ENST00000454542 C14orf178Q8N769 122 aaPredicted RBP9.69□□□□□ -0.86
HDAC4-205ENST00000454542 NUDT10Q8NFP7 164 aa9.69□□□□□ -0.86
HDAC4-205ENST00000454542 NUDT11Q96G61 164 aa9.69□□□□□ -0.86
HDAC4-205ENST00000454542 A0A087WWL8 130 aa9.68□□□□□ -0.86
HDAC4-205ENST00000454542 SIVA1O15304 175 aa9.68□□□□□ -0.86
HDAC4-205ENST00000454542 BTF3P20290 206 aaKnown RBP9.68□□□□□ -0.86
HDAC4-205ENST00000454542 FAM74A4Q5TZK3 123 aa9.68□□□□□ -0.86
HDAC4-205ENST00000454542 FER1L6-AS1Q8NA97 138 aa9.68□□□□□ -0.86
HDAC4-205ENST00000454542 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
HDAC4-205ENST00000454542 RPP21Q9H633 154 aaKnown RBP9.68□□□□□ -0.86
HDAC4-205ENST00000454542 A0A1B0GVY2 172 aa9.67□□□□□ -0.86
HDAC4-205ENST00000454542 XKRY2A2RUG3 117 aa9.67□□□□□ -0.86
HDAC4-205ENST00000454542 SPANXN1Q5VSR9 72 aa9.67□□□□□ -0.86
HDAC4-205ENST00000454542 LINC01551Q86U37 167 aa9.67□□□□□ -0.86
HDAC4-205ENST00000454542 AP1S3Q96PC3 154 aa9.67□□□□□ -0.86
HDAC4-205ENST00000454542 SMIM7Q9BQ49 75 aa9.67□□□□□ -0.86
HDAC4-205ENST00000454542 RNASE7Q9H1E1 156 aaKnown RBP9.67□□□□□ -0.86
HDAC4-205ENST00000454542 Q9UF83 564 aa9.67□□□□□ -0.86
HDAC4-205ENST00000454542 KIF25-AS1Q9Y6Z4 181 aa9.67□□□□□ -0.86
HDAC4-205ENST00000454542 DYNC1H1Q14204 4646 aaKnown RBP9.67□□□□□ -0.86
HDAC4-205ENST00000454542 PKHD1P08F94 4074 aa9.66□□□□□ -0.86
HDAC4-205ENST00000454542 TRBV10-1A0A0K0K1A3 114 aa9.66□□□□□ -0.86
HDAC4-205ENST00000454542 C9JQL5 133 aa9.66□□□□□ -0.86
HDAC4-205ENST00000454542 CT83Q5H943 113 aa9.66□□□□□ -0.86
HDAC4-205ENST00000454542 C1orf134Q5TEV5 83 aa9.66□□□□□ -0.86
HDAC4-205ENST00000454542 WFDC10BQ8IUB3 73 aa9.66□□□□□ -0.86
HDAC4-205ENST00000454542 C6orf223Q8N319 242 aa9.66□□□□□ -0.86
HDAC4-205ENST00000454542 SMDT1Q9H4I9 107 aa9.66□□□□□ -0.86
HDAC4-205ENST00000454542 MUC21A0A0G2JKD1 596 aa9.65□□□□□ -0.86
HDAC4-205ENST00000454542 MUC21A0A140T8X8 626 aa9.65□□□□□ -0.86
HDAC4-205ENST00000454542 F2Z2F3 143 aa9.65□□□□□ -0.86
HDAC4-205ENST00000454542 DNAH10OSP0CZ25 163 aa9.65□□□□□ -0.86
HDAC4-205ENST00000454542 LINC00315P59091 139 aa9.65□□□□□ -0.86
HDAC4-205ENST00000454542 CACNG7P62955 275 aa9.65□□□□□ -0.86
HDAC4-205ENST00000454542 OR10G8Q8NGN5 311 aa9.65□□□□□ -0.86
HDAC4-205ENST00000454542 GAGE12JA6NER3 117 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 ZNF727A8MUV8 499 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 CEBPGP53567 150 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 RAB4BP61018 213 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 SRSF3P84103 164 aaKnown RBP9.64□□□□□ -0.87
HDAC4-205ENST00000454542 GAGE1Q13065 139 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 GAGE4Q13068 117 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 GAGE5Q13069 117 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 GAGE13Q4V321 117 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 SOHLH1Q5JUK2 328 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 LELP1Q5T871 98 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 WDR73Q6P4I2 378 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 LYZL1Q6UWQ5 148 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 ATP6V0E2Q8NHE4 81 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 GTSF1LQ9H1H1 148 aa9.64□□□□□ -0.87
HDAC4-205ENST00000454542 PRSS29PA6NIE9 313 aa9.63□□□□□ -0.87
HDAC4-205ENST00000454542 K7EP13 123 aa9.63□□□□□ -0.87
HDAC4-205ENST00000454542 FAM74A3Q4VXF1 159 aa9.63□□□□□ -0.87
HDAC4-205ENST00000454542 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
HDAC4-205ENST00000454542 GATCO43716 136 aaKnown RBP9.62□□□□□ -0.87
HDAC4-205ENST00000454542 UBE2D3P61077 147 aa9.62□□□□□ -0.87
HDAC4-205ENST00000454542 UBE2D2P62837 147 aa9.62□□□□□ -0.87
HDAC4-205ENST00000454542 ZNF56Q15929 161 aa9.62□□□□□ -0.87
HDAC4-205ENST00000454542 LINC01556Q5JQF7 62 aa9.62□□□□□ -0.87
HDAC4-205ENST00000454542 Q6ZRN7 208 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-205ENST00000454542 NEXN-AS1Q8NBZ9 246 aa9.62□□□□□ -0.87
HDAC4-205ENST00000454542 TPPP3Q9BW30 176 aa9.62□□□□□ -0.87
HDAC4-205ENST00000454542 OSTCQ9NRP0 149 aa9.62□□□□□ -0.87
HDAC4-205ENST00000454542 MSRB1Q9NZV6 116 aa9.62□□□□□ -0.87
HDAC4-205ENST00000454542 TRGC1P0CF51 173 aa9.61□□□□□ -0.87
HDAC4-205ENST00000454542 FOXA3P55318 350 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-205ENST00000454542 PEA15Q15121 130 aa9.61□□□□□ -0.87
HDAC4-205ENST00000454542 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
HDAC4-205ENST00000454542 TRBV7-3A0A075B6L6 115 aa9.6□□□□□ -0.87
HDAC4-205ENST00000454542 IGHV3-38A0A0C4DH36 116 aa9.6□□□□□ -0.87
HDAC4-205ENST00000454542 ERVFC1-1P60608 527 aa9.6□□□□□ -0.87
HDAC4-205ENST00000454542 RPL23P62829 140 aaKnown RBP9.6□□□□□ -0.87
HDAC4-205ENST00000454542 RPL36AP83881 106 aaKnown RBP9.6□□□□□ -0.87
HDAC4-205ENST00000454542 RPL36ALQ969Q0 106 aaKnown RBP9.6□□□□□ -0.87
HDAC4-205ENST00000454542 NAT8Q9UHE5 227 aa9.6□□□□□ -0.87
HDAC4-205ENST00000454542 TRAV8-6A0A0B4J262 113 aa9.59□□□□□ -0.87
HDAC4-205ENST00000454542 A8MWL6 223 aa9.59□□□□□ -0.87
HDAC4-205ENST00000454542 SMIM17P0DL12 118 aa9.59□□□□□ -0.87
HDAC4-205ENST00000454542 NTF3P20783 257 aa9.59□□□□□ -0.87
HDAC4-205ENST00000454542 EVI2AP22794 236 aa9.59□□□□□ -0.87
HDAC4-205ENST00000454542 IFITM2Q01629 132 aa9.59□□□□□ -0.87
HDAC4-205ENST00000454542 CLLU1Q5K131 121 aa9.59□□□□□ -0.87
HDAC4-205ENST00000454542 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
HDAC4-205ENST00000454542 V9GYV3 84 aa9.59□□□□□ -0.87
HDAC4-205ENST00000454542 DNAH5Q8TE73 4624 aa9.59□□□□□ -0.87
HDAC4-205ENST00000454542 A0A087WWC5 75 aa9.58□□□□□ -0.88
HDAC4-205ENST00000454542 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
HDAC4-205ENST00000454542 M0QY20 66 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms