RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 Q6ZSN1 163 aa19.36■□□□□ 0.69
SMARCC1-203ENST00000454240 A0A1W2PPQ1 181 aa19.35■□□□□ 0.69
SMARCC1-203ENST00000454240 F2Z2F3 143 aa19.35■□□□□ 0.69
SMARCC1-203ENST00000454240 ERVFC1-1P60608 527 aa19.35■□□□□ 0.69
SMARCC1-203ENST00000454240 A0A087WWL8 130 aa19.34■□□□□ 0.69
SMARCC1-203ENST00000454240 LOC100131303A0A0U1RQF7 123 aa19.34■□□□□ 0.69
SMARCC1-203ENST00000454240 GATCO43716 136 aaKnown RBP19.34■□□□□ 0.69
SMARCC1-203ENST00000454240 RHOHQ15669 191 aa19.34■□□□□ 0.69
SMARCC1-203ENST00000454240 TPPP3Q9BW30 176 aa19.34■□□□□ 0.69
SMARCC1-203ENST00000454240 SOHLH1Q5JUK2 328 aa19.33■□□□□ 0.68
SMARCC1-203ENST00000454240 FAM74A4Q5TZK3 123 aa19.33■□□□□ 0.68
SMARCC1-203ENST00000454240 NEGR1Q7Z3B1 354 aa19.33■□□□□ 0.68
SMARCC1-203ENST00000454240 PRADC1Q9BSG0 188 aa19.33■□□□□ 0.68
SMARCC1-203ENST00000454240 NAT8Q9UHE5 227 aa19.33■□□□□ 0.68
SMARCC1-203ENST00000454240 SRIP30626 198 aa19.32■□□□□ 0.68
SMARCC1-203ENST00000454240 SSTP61278 116 aa19.32■□□□□ 0.68
SMARCC1-203ENST00000454240 RPL23P62829 140 aaKnown RBP19.32■□□□□ 0.68
SMARCC1-203ENST00000454240 CACNG7P62955 275 aa19.32■□□□□ 0.68
SMARCC1-203ENST00000454240 LYZL1Q6UWQ5 148 aa19.32■□□□□ 0.68
SMARCC1-203ENST00000454240 OSTCQ9NRP0 149 aa19.32■□□□□ 0.68
SMARCC1-203ENST00000454240 CT83Q5H943 113 aa19.31■□□□□ 0.68
SMARCC1-203ENST00000454240 ZNRF2Q8NHG8 242 aa19.31■□□□□ 0.68
SMARCC1-203ENST00000454240 CTRLP40313 264 aa19.3■□□□□ 0.68
SMARCC1-203ENST00000454240 ISOC2Q96AB3 205 aa19.3■□□□□ 0.68
SMARCC1-203ENST00000454240 A8MWL6 223 aa19.29■□□□□ 0.68
SMARCC1-203ENST00000454240 WDR73Q6P4I2 378 aa19.29■□□□□ 0.68
SMARCC1-203ENST00000454240 LYPD5Q6UWN5 251 aa19.29■□□□□ 0.68
SMARCC1-203ENST00000454240 C14orf178Q8N769 122 aaPredicted RBP19.29■□□□□ 0.68
SMARCC1-203ENST00000454240 GTSF1Q8WW33 167 aa19.29■□□□□ 0.68
SMARCC1-203ENST00000454240 UPK3BQ9BT76 320 aa19.29■□□□□ 0.68
SMARCC1-203ENST00000454240 MRPS16Q9Y3D3 137 aaKnown RBP19.29■□□□□ 0.68
SMARCC1-203ENST00000454240 SH2D6Q7Z4S9 175 aa19.28■□□□□ 0.68
SMARCC1-203ENST00000454240 CNFNQ9BYD5 112 aa19.28■□□□□ 0.68
SMARCC1-203ENST00000454240 MSRB1Q9NZV6 116 aa19.28■□□□□ 0.68
SMARCC1-203ENST00000454240 KIF25-AS1Q9Y6Z4 181 aa19.28■□□□□ 0.68
SMARCC1-203ENST00000454240 AP1S3Q96PC3 154 aa19.27■□□□□ 0.68
SMARCC1-203ENST00000454240 FOXA3P55318 350 aaPredicted RBP19.26■□□□□ 0.67
SMARCC1-203ENST00000454240 ADIRFQ15847 76 aa19.26■□□□□ 0.67
SMARCC1-203ENST00000454240 Q9UF83 564 aa19.26■□□□□ 0.67
SMARCC1-203ENST00000454240 NTF3P20783 257 aa19.25■□□□□ 0.67
SMARCC1-203ENST00000454240 RAB4BP61018 213 aa19.25■□□□□ 0.67
SMARCC1-203ENST00000454240 C15orf54Q8N8G6 183 aa19.25■□□□□ 0.67
SMARCC1-203ENST00000454240 IGLV2-18A0A075B6J9 118 aa19.24■□□□□ 0.67
SMARCC1-203ENST00000454240 V9GYV3 84 aa19.24■□□□□ 0.67
SMARCC1-203ENST00000454240 SMIM17P0DL12 118 aa19.23■□□□□ 0.67
SMARCC1-203ENST00000454240 LINC00315P59091 139 aa19.23■□□□□ 0.67
SMARCC1-203ENST00000454240 TSKUQ8WUA8 353 aa19.23■□□□□ 0.67
SMARCC1-203ENST00000454240 Q9H8V8 135 aa19.23■□□□□ 0.67
SMARCC1-203ENST00000454240 LINC00694P0DN24 101 aa19.22■□□□□ 0.67
SMARCC1-203ENST00000454240 GFRA4Q9GZZ7 299 aa19.22■□□□□ 0.67
SMARCC1-203ENST00000454240 FAM231BA6NCW3 169 aa19.21■□□□□ 0.67
SMARCC1-203ENST00000454240 TIRAPP58753 221 aa19.21■□□□□ 0.67
SMARCC1-203ENST00000454240 ZNF56Q15929 161 aa19.21■□□□□ 0.67
SMARCC1-203ENST00000454240 Q6ZR54 194 aa19.21■□□□□ 0.67
SMARCC1-203ENST00000454240 OR10G8Q8NGN5 311 aa19.21■□□□□ 0.67
SMARCC1-203ENST00000454240 TRBV10-1A0A0K0K1A3 114 aa19.2■□□□□ 0.66
SMARCC1-203ENST00000454240 GAGE12JA6NER3 117 aa19.2■□□□□ 0.66
SMARCC1-203ENST00000454240 M0R2N4 97 aa19.2■□□□□ 0.66
SMARCC1-203ENST00000454240 TRGC1P0CF51 173 aa19.2■□□□□ 0.66
SMARCC1-203ENST00000454240 EVI2AP22794 236 aa19.2■□□□□ 0.66
SMARCC1-203ENST00000454240 GAGE1Q13065 139 aa19.2■□□□□ 0.66
SMARCC1-203ENST00000454240 GAGE4Q13068 117 aa19.2■□□□□ 0.66
SMARCC1-203ENST00000454240 GAGE5Q13069 117 aa19.2■□□□□ 0.66
SMARCC1-203ENST00000454240 GAGE13Q4V321 117 aa19.2■□□□□ 0.66
SMARCC1-203ENST00000454240 PGLYRP4Q96LB8 373 aa19.2■□□□□ 0.66
SMARCC1-203ENST00000454240 TWIST1Q15672 202 aa19.19■□□□□ 0.66
SMARCC1-203ENST00000454240 UQCC3Q6UW78 93 aa19.19■□□□□ 0.66
SMARCC1-203ENST00000454240 ATP6V0E2Q8NHE4 81 aa19.19■□□□□ 0.66
SMARCC1-203ENST00000454240 HIGD1CA8MV81 97 aa19.17■□□□□ 0.66
SMARCC1-203ENST00000454240 F5H697 171 aa19.17■□□□□ 0.66
SMARCC1-203ENST00000454240 NBDYA0A0U1RRE5 68 aa19.16■□□□□ 0.66
SMARCC1-203ENST00000454240 GTSF1LQ9H1H1 148 aa19.16■□□□□ 0.66
SMARCC1-203ENST00000454240 DPH3P1Q9H4G8 78 aa19.16■□□□□ 0.66
SMARCC1-203ENST00000454240 DNAH2Q9P225 4427 aa19.15■□□□□ 0.66
SMARCC1-203ENST00000454240 SIVA1O15304 175 aa19.14■□□□□ 0.65
SMARCC1-203ENST00000454240 MGPP08493 103 aa19.14■□□□□ 0.65
SMARCC1-203ENST00000454240 RPL36AP83881 106 aaKnown RBP19.14■□□□□ 0.65
SMARCC1-203ENST00000454240 RPL36ALQ969Q0 106 aaKnown RBP19.14■□□□□ 0.65
SMARCC1-203ENST00000454240 DNAH10Q8IVF4 4471 aa19.14■□□□□ 0.65
SMARCC1-203ENST00000454240 TRBV7-3A0A075B6L6 115 aa19.13■□□□□ 0.65
SMARCC1-203ENST00000454240 PNRC1Q12796 327 aaPredicted RBP19.13■□□□□ 0.65
SMARCC1-203ENST00000454240 NEXN-AS1Q8NBZ9 246 aa19.13■□□□□ 0.65
SMARCC1-203ENST00000454240 A0A1B0GUT8 65 aa19.12■□□□□ 0.65
SMARCC1-203ENST00000454240 LINC00862A6NCI5 91 aa19.12■□□□□ 0.65
SMARCC1-203ENST00000454240 NUP35Q8NFH5 326 aa19.12■□□□□ 0.65
SMARCC1-203ENST00000454240 BORCS7Q96B45 105 aa19.12■□□□□ 0.65
SMARCC1-203ENST00000454240 FRAS1Q86XX4 4008 aa19.12■□□□□ 0.65
SMARCC1-203ENST00000454240 SMIM27A0A1W2PRY6 76 aa19.11■□□□□ 0.65
SMARCC1-203ENST00000454240 M0QY20 66 aa19.11■□□□□ 0.65
SMARCC1-203ENST00000454240 UBE2D3P61077 147 aa19.11■□□□□ 0.65
SMARCC1-203ENST00000454240 UBE2D2P62837 147 aa19.11■□□□□ 0.65
SMARCC1-203ENST00000454240 LELP1Q5T871 98 aa19.11■□□□□ 0.65
SMARCC1-203ENST00000454240 COMMD7Q86VX2 200 aa19.11■□□□□ 0.65
SMARCC1-203ENST00000454240 WFDC10BQ8IUB3 73 aa19.11■□□□□ 0.65
SMARCC1-203ENST00000454240 NAT8BQ9UHF3 227 aa19.11■□□□□ 0.65
SMARCC1-203ENST00000454240 TMEM218A2RU14 115 aa19.1■□□□□ 0.65
SMARCC1-203ENST00000454240 SUMO4Q6EEV6 95 aa19.1■□□□□ 0.65
SMARCC1-203ENST00000454240 SMIM15Q7Z3B0 74 aa19.09■□□□□ 0.65
SMARCC1-203ENST00000454240 KRTAP1-5Q9BYS1 174 aa19.09■□□□□ 0.65
SMARCC1-203ENST00000454240 H7C1H1 209 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms