RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 NEXN-AS1Q8NBZ9 246 aa10.57□□□□□ -0.72
UBE2D3-210ENST00000453744 PIFOQ8TCI5 191 aa10.57□□□□□ -0.72
UBE2D3-210ENST00000453744 TRAV12-1A0A0B4J245 112 aa10.57□□□□□ -0.72
UBE2D3-210ENST00000453744 RBAKDNA6NC62 111 aa10.57□□□□□ -0.72
UBE2D3-210ENST00000453744 COX6CP09669 75 aa10.57□□□□□ -0.72
UBE2D3-210ENST00000453744 MINOS1Q5TGZ0 78 aa10.57□□□□□ -0.72
UBE2D3-210ENST00000453744 CCDC140Q96MF4 163 aa10.57□□□□□ -0.72
UBE2D3-210ENST00000453744 MINOS1-NBL1R4GNA1 71 aa10.57□□□□□ -0.72
UBE2D3-210ENST00000453744 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 ZFP36P26651 326 aaKnown RBP10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 ZNF876PQ49A33 203 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 DGAT2L7PQ6IED9 249 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 NFE4Q86UQ8 179 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 NDUFA11Q86Y39 141 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 RHPN1-AS1Q9BWJ2 59 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 IGLV2-18A0A075B6J9 118 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 RPL13AP40429 203 aaKnown RBP10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 CFAP126Q5VTH2 177 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 Q6ZS46 218 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 CNFNQ9BYD5 112 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 TRBV12-3P01733 135 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 UNQ9165/PRO28630Q6UXU0 137 aa10.56□□□□□ -0.72
UBE2D3-210ENST00000453744 TRAV8-4A0A0B4J246 113 aa10.55□□□□□ -0.72
UBE2D3-210ENST00000453744 ZFAND3Q9H8U3 227 aa10.55□□□□□ -0.72
UBE2D3-210ENST00000453744 MSRB2Q9Y3D2 182 aa10.55□□□□□ -0.72
UBE2D3-210ENST00000453744 ID1P41134 155 aa10.55□□□□□ -0.72
UBE2D3-210ENST00000453744 C10orf126Q8N4M7 172 aa10.55□□□□□ -0.72
UBE2D3-210ENST00000453744 ZNF48Q96MX3 618 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3-210ENST00000453744 C20orf173Q96LM9 149 aa10.55□□□□□ -0.72
UBE2D3-210ENST00000453744 KLK9Q9UKQ9 250 aa10.55□□□□□ -0.72
UBE2D3-210ENST00000453744 PRSS47A8MTI9 375 aa10.54□□□□□ -0.72
UBE2D3-210ENST00000453744 C2orf82Q6UX34 121 aa10.54□□□□□ -0.72
UBE2D3-210ENST00000453744 C9orf47Q6ZRZ4 202 aa10.54□□□□□ -0.72
UBE2D3-210ENST00000453744 OOSP1A8MZH6 123 aa10.53□□□□□ -0.72
UBE2D3-210ENST00000453744 CD28P10747 220 aa10.53□□□□□ -0.72
UBE2D3-210ENST00000453744 BPESC1Q9GZL8 116 aa10.53□□□□□ -0.72
UBE2D3-210ENST00000453744 TCTEX1D4Q5JR98 221 aa10.53□□□□□ -0.72
UBE2D3-210ENST00000453744 KHDC1LQ5JSQ8 128 aa10.53□□□□□ -0.72
UBE2D3-210ENST00000453744 Q8NA96 180 aa10.53□□□□□ -0.72
UBE2D3-210ENST00000453744 PRO3102Q9H379 93 aa10.53□□□□□ -0.72
UBE2D3-210ENST00000453744 SMG1Q96Q15 3661 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-210ENST00000453744 KNCNA6PVL3 124 aa10.53□□□□□ -0.72
UBE2D3-210ENST00000453744 SRSF2Q01130 221 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-210ENST00000453744 C3orf56Q8N813 242 aa10.53□□□□□ -0.72
UBE2D3-210ENST00000453744 A0A0J9YY99 117 aa10.52□□□□□ -0.72
UBE2D3-210ENST00000453744 CFC1BP0CG36 223 aa10.52□□□□□ -0.72
UBE2D3-210ENST00000453744 CFC1P0CG37 223 aa10.52□□□□□ -0.72
UBE2D3-210ENST00000453744 SUMO4Q6EEV6 95 aa10.52□□□□□ -0.72
UBE2D3-210ENST00000453744 MUSTN1Q8IVN3 82 aa10.52□□□□□ -0.72
UBE2D3-210ENST00000453744 A0A0J9YXV3 536 aa10.52□□□□□ -0.73
UBE2D3-210ENST00000453744 NPFFO15130 113 aa10.52□□□□□ -0.73
UBE2D3-210ENST00000453744 LY6G5BQ8NDX9 201 aa10.51□□□□□ -0.73
UBE2D3-210ENST00000453744 ZNF625Q96I27 306 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-210ENST00000453744 ZZEF1O43149 2961 aa10.51□□□□□ -0.73
UBE2D3-210ENST00000453744 GATA3P23771 443 aa10.51□□□□□ -0.73
UBE2D3-210ENST00000453744 SMCPP49901 116 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-210ENST00000453744 DUX5Q96PT3 197 aa10.51□□□□□ -0.73
UBE2D3-210ENST00000453744 TRAV8-3A0A0A6YYJ7 113 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 ATXN8Q156A1 80 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 SPINK13Q1W4C9 94 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 PRO0461Q9UI25 63 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 LAMA5O15230 3695 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 CLPSL1A2RUU4 121 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 ODF3BA8MYP8 253 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 TMEM95Q3KNT9 176 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 UBE2E1P51965 193 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 GAGE5Q13069 117 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 GAGE6Q13070 117 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 C15orf53Q8NAA6 179 aa10.5□□□□□ -0.73
UBE2D3-210ENST00000453744 LRBAP50851 2863 aa10.49□□□□□ -0.73
UBE2D3-210ENST00000453744 DMXL1Q9Y485 3027 aa10.49□□□□□ -0.73
UBE2D3-210ENST00000453744 ZFAND2AQ8N6M9 145 aa10.49□□□□□ -0.73
UBE2D3-210ENST00000453744 CDIP1Q9H305 208 aa10.49□□□□□ -0.73
UBE2D3-210ENST00000453744 MOB4Q9Y3A3 225 aa10.49□□□□□ -0.73
UBE2D3-210ENST00000453744 CENPVL3A0A0U1RRI6 287 aa10.49□□□□□ -0.73
UBE2D3-210ENST00000453744 CRIP2P52943 208 aaPredicted RBP10.49□□□□□ -0.73
UBE2D3-210ENST00000453744 COX8CQ7Z4L0 72 aa10.49□□□□□ -0.73
UBE2D3-210ENST00000453744 H3BUX3 64 aa10.49□□□□□ -0.73
UBE2D3-210ENST00000453744 ATP6V0E2Q8NHE4 81 aa10.48□□□□□ -0.73
UBE2D3-210ENST00000453744 TIMM21Q9BVV7 248 aa10.48□□□□□ -0.73
UBE2D3-210ENST00000453744 TNFRSF18Q9Y5U5 241 aa10.48□□□□□ -0.73
UBE2D3-210ENST00000453744 M0R2P5 195 aa10.48□□□□□ -0.73
UBE2D3-210ENST00000453744 CARD19Q96LW7 228 aa10.48□□□□□ -0.73
UBE2D3-210ENST00000453744 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-210ENST00000453744 TMEM141Q96I45 108 aa10.48□□□□□ -0.73
UBE2D3-210ENST00000453744 IGHV3OR16-12A0A075B7B8 117 aa10.47□□□□□ -0.73
UBE2D3-210ENST00000453744 TEX49A0A1B0GTD5 131 aa10.47□□□□□ -0.73
UBE2D3-210ENST00000453744 TSPEAR-AS2P59090 65 aa10.47□□□□□ -0.73
UBE2D3-210ENST00000453744 MRPL53Q96EL3 112 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-210ENST00000453744 H3BMM0 161 aa10.47□□□□□ -0.73
UBE2D3-210ENST00000453744 SNRPD3P62318 126 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-210ENST00000453744 DAND5Q8N907 189 aa10.47□□□□□ -0.73
UBE2D3-210ENST00000453744 UBE2WQ96B02 151 aa10.47□□□□□ -0.73
UBE2D3-210ENST00000453744 UBE2D1P51668 147 aa10.46□□□□□ -0.73
UBE2D3-210ENST00000453744 CEMP1Q6PRD7 247 aaPredicted RBP10.46□□□□□ -0.73
UBE2D3-210ENST00000453744 FN1P02751 2386 aaKnown RBP10.46□□□□□ -0.73
UBE2D3-210ENST00000453744 SMIM20Q8N5G0 67 aa10.46□□□□□ -0.73
UBE2D3-210ENST00000453744 LINC01620Q4KN68 170 aa10.46□□□□□ -0.74
UBE2D3-210ENST00000453744 SLC25A29Q8N8R3 303 aa10.46□□□□□ -0.74
UBE2D3-210ENST00000453744 MDFICQ9P1T7 246 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms