RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 LINC00862A6NCI5 91 aa6.13□□□□□ -1.43
COL28A1-205ENST00000453441 IGLL5B9A064 214 aa6.13□□□□□ -1.43
COL28A1-205ENST00000453441 RS1O15537 224 aa6.13□□□□□ -1.43
COL28A1-205ENST00000453441 NXPH4O95158 308 aa6.13□□□□□ -1.43
COL28A1-205ENST00000453441 SFTA3P0C7M3 94 aa6.13□□□□□ -1.43
COL28A1-205ENST00000453441 IGLC6P0CF74 106 aa6.13□□□□□ -1.43
COL28A1-205ENST00000453441 RPL23P62829 140 aaKnown RBP6.13□□□□□ -1.43
COL28A1-205ENST00000453441 RPL19P84098 196 aaKnown RBP6.13□□□□□ -1.43
COL28A1-205ENST00000453441 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
COL28A1-205ENST00000453441 GFRA4Q9GZZ7 299 aa6.13□□□□□ -1.43
COL28A1-205ENST00000453441 PRO0255Q9UI72 69 aa6.13□□□□□ -1.43
COL28A1-205ENST00000453441 TRGV4A0A0C4DH28 118 aa6.12□□□□□ -1.43
COL28A1-205ENST00000453441 CTRLP40313 264 aa6.12□□□□□ -1.43
COL28A1-205ENST00000453441 ADIRFQ15847 76 aa6.12□□□□□ -1.43
COL28A1-205ENST00000453441 SPANXN1Q5VSR9 72 aa6.12□□□□□ -1.43
COL28A1-205ENST00000453441 COMMD7Q86VX2 200 aa6.12□□□□□ -1.43
COL28A1-205ENST00000453441 ZNF575Q86XF7 245 aa6.12□□□□□ -1.43
COL28A1-205ENST00000453441 ISOC2Q96AB3 205 aa6.12□□□□□ -1.43
COL28A1-205ENST00000453441 SFRP2Q96HF1 295 aa6.12□□□□□ -1.43
COL28A1-205ENST00000453441 RNASE7Q9H1E1 156 aaKnown RBP6.12□□□□□ -1.43
COL28A1-205ENST00000453441 TRBV6-4A0A1B0GX49 114 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 TMEM218A2RU14 115 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 M0R381 172 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 PPP1R2P9O14990 202 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 TRGC1P0CF51 173 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 FOXA3P55318 350 aaPredicted RBP6.11□□□□□ -1.43
COL28A1-205ENST00000453441 FHL2Q14192 279 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 LCE5AQ5TCM9 118 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 CFAP126Q5VTH2 177 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 TMEM88Q6PEY1 159 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 SH2D6Q7Z4S9 175 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 OR10G8Q8NGN5 311 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 TSKUQ8WUA8 353 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 BORCS7Q96B45 105 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 AP1S3Q96PC3 154 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 CNFNQ9BYD5 112 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 APLNQ9ULZ1 77 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 HHLA3Q9XRX5 114 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 TENM2Q9NT68 2774 aa6.11□□□□□ -1.43
COL28A1-205ENST00000453441 TRAV26-1A0A087WT03 109 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 IGHV3-53P01767 116 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 P0DMU3 169 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 FAM231AP0DMU4 169 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 FAM231CP0DMU5 169 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 CRYBA4P53673 196 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 FAM3BP58499 235 aaPredicted RBP6.1□□□□□ -1.43
COL28A1-205ENST00000453441 RHOHQ15669 191 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 LGALS9CQ6DKI2 356 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 POM121L12Q8N7R1 296 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 OR10AG1Q8NH19 301 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 ZNF479Q96JC4 524 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 PRADC1Q9BSG0 188 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 TPPP3Q9BW30 176 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 SEC11CQ9BY50 192 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 ALMS1Q8TCU4 4167 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 NACAE9PAV3 2078 aa6.1□□□□□ -1.43
COL28A1-205ENST00000453441 F8W036 122 aa6.09□□□□□ -1.43
COL28A1-205ENST00000453441 MT-ND4LP03901 98 aa6.09□□□□□ -1.43
COL28A1-205ENST00000453441 SMIM17P0DL12 118 aa6.09□□□□□ -1.43
COL28A1-205ENST00000453441 GATA1P15976 413 aaPredicted RBP6.09□□□□□ -1.43
COL28A1-205ENST00000453441 MRPL23Q16540 153 aaKnown RBP6.09□□□□□ -1.43
COL28A1-205ENST00000453441 LYZL1Q6UWQ5 148 aa6.09□□□□□ -1.43
COL28A1-205ENST00000453441 SMIM15Q7Z3B0 74 aa6.09□□□□□ -1.43
COL28A1-205ENST00000453441 NAT8BQ9UHF3 227 aa6.09□□□□□ -1.43
COL28A1-205ENST00000453441 ICOSQ9Y6W8 199 aa6.09□□□□□ -1.43
COL28A1-205ENST00000453441 V9GYV3 84 aa6.09□□□□□ -1.43
COL28A1-205ENST00000453441 DNAH1Q9P2D7 4330 aa6.08□□□□□ -1.44
COL28A1-205ENST00000453441 TRBV10-1A0A0K0K1A3 114 aa6.08□□□□□ -1.44
COL28A1-205ENST00000453441 LCE6AA0A183 80 aa6.08□□□□□ -1.44
COL28A1-205ENST00000453441 A0A1B0GW15 77 aa6.08□□□□□ -1.44
COL28A1-205ENST00000453441 GZMBP10144 247 aa6.08□□□□□ -1.44
COL28A1-205ENST00000453441 RAB4BP61018 213 aa6.08□□□□□ -1.44
COL28A1-205ENST00000453441 RNF212Q495C1 297 aa6.08□□□□□ -1.44
COL28A1-205ENST00000453441 UFSP1Q6NVU6 142 aa6.08□□□□□ -1.44
COL28A1-205ENST00000453441 GTSF1Q8WW33 167 aa6.08□□□□□ -1.44
COL28A1-205ENST00000453441 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
COL28A1-205ENST00000453441 VSIG2Q96IQ7 327 aa6.08□□□□□ -1.44
COL28A1-205ENST00000453441 A0A0J9YY99 117 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 A0A1B0GUT8 65 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 SMIM27A0A1W2PRY6 76 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 HIGD1CA8MV81 97 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 H7C1H1 209 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 K7EQD1 137 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 NUDT3O95989 172 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 S100A8P05109 93 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 CRYGDP07320 174 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 NTF3P20783 257 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 SRIP30626 198 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 CCL18P55774 89 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 KRTAP10-2P60368 255 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 TWIST1Q15672 202 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 NDUFA5Q16718 116 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 C10orf91Q5T1B1 145 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 FAM74A4Q5TZK3 123 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 SLC25A29Q8N8R3 303 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 FRZBQ92765 325 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 DPH3P1Q9H4G8 78 aa6.07□□□□□ -1.44
COL28A1-205ENST00000453441 GYPEP15421 78 aa6.06□□□□□ -1.44
COL28A1-205ENST00000453441 TIRAPP58753 221 aa6.06□□□□□ -1.44
COL28A1-205ENST00000453441 RIGQ13278 110 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms