RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 UBE2CO00762 179 aa4.31□□□□□ -1.72
SDC4P-201ENST00000453285 S100A6P06703 90 aa4.31□□□□□ -1.72
SDC4P-201ENST00000453285 GATA1P15976 413 aaPredicted RBP4.31□□□□□ -1.72
SDC4P-201ENST00000453285 APOC4P55056 127 aa4.31□□□□□ -1.72
SDC4P-201ENST00000453285 DAZ2Q13117 558 aaKnown RBP4.31□□□□□ -1.72
SDC4P-201ENST00000453285 IQCJQ1A5X6 159 aa4.31□□□□□ -1.72
SDC4P-201ENST00000453285 ZNF876PQ49A33 203 aa4.31□□□□□ -1.72
SDC4P-201ENST00000453285 KPRPQ5T749 579 aaPredicted RBP4.31□□□□□ -1.72
SDC4P-201ENST00000453285 UFSP1Q6NVU6 142 aa4.31□□□□□ -1.72
SDC4P-201ENST00000453285 SYT8Q8NBV8 401 aa4.31□□□□□ -1.72
SDC4P-201ENST00000453285 RASL10AQ92737 203 aa4.31□□□□□ -1.72
SDC4P-201ENST00000453285 AP1S3Q96PC3 154 aa4.31□□□□□ -1.72
SDC4P-201ENST00000453285 OVOL2Q9BRP0 275 aa4.31□□□□□ -1.72
SDC4P-201ENST00000453285 A0A087WWL8 130 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 SMIM9A6NGZ8 99 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 IFITM10A6NMD0 228 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 PRSS47A8MTI9 375 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 RS1O15537 224 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 NCR2O95944 276 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 NPYP01303 97 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 PPBPP02775 128 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 ESDP10768 282 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 CKS2P33552 79 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 RRN3P1Q2M238 152 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 SMIM15Q7Z3B0 74 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 ORMDL3Q8N138 153 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 HIST3H2BBQ8N257 126 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 NRACQ8N912 160 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 RNF183Q96D59 192 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 MRAP2Q96G30 205 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 C16orf74Q96GX8 76 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 PRELID3AQ96N28 172 aa4.3□□□□□ -1.72
SDC4P-201ENST00000453285 MRPL16Q9NX20 251 aaKnown RBP4.3□□□□□ -1.72
SDC4P-201ENST00000453285 IGLV2-18A0A075B6J9 118 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 TRAV26-2A0A0B4J265 109 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 A8MWV9 139 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 K7EIL1 84 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 SERF1AO75920 110 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 TNFRSF6BO95407 300 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 DEFB135Q30KP9 77 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 LGALS9BQ3B8N2 356 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 CFAP126Q5VTH2 177 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 SUMO4Q6EEV6 95 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 Q6ZTI0 123 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 Q6ZWC4 215 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 NIT1Q86X76 327 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 LINC00612Q8N6U2 182 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 NDUFAF3Q9BU61 184 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 NOP10Q9NPE3 64 aaKnown RBP4.29□□□□□ -1.72
SDC4P-201ENST00000453285 TENM3Q9P273 2699 aa4.29□□□□□ -1.72
SDC4P-201ENST00000453285 TRGV1A0A0A0MS02 117 aa4.28□□□□□ -1.72
SDC4P-201ENST00000453285 M0QY20 66 aa4.28□□□□□ -1.72
SDC4P-201ENST00000453285 PRB2P02812 416 aaPredicted RBP4.28□□□□□ -1.72
SDC4P-201ENST00000453285 MGPP08493 103 aa4.28□□□□□ -1.72
SDC4P-201ENST00000453285 SMIM17P0DL12 118 aa4.28□□□□□ -1.72
SDC4P-201ENST00000453285 Q6ZSN1 163 aa4.28□□□□□ -1.72
SDC4P-201ENST00000453285 BAGE3Q86Y29 109 aa4.28□□□□□ -1.72
SDC4P-201ENST00000453285 Q8NAQ8 132 aa4.28□□□□□ -1.72
SDC4P-201ENST00000453285 OR11H2Q8NH07 326 aa4.28□□□□□ -1.72
SDC4P-201ENST00000453285 RPL39LQ96EH5 51 aaKnown RBP4.28□□□□□ -1.72
SDC4P-201ENST00000453285 EDA2RQ9HAV5 297 aa4.28□□□□□ -1.72
SDC4P-201ENST00000453285 LAMTOR2Q9Y2Q5 125 aa4.28□□□□□ -1.72
SDC4P-201ENST00000453285 IGHV3-73A0A0B4J1V6 119 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 TRAV4A0A0B4J268 109 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 IGHV4-28A0A0C4DH34 117 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 TRBV6-5A0A0K0K1A5 114 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 LOC389332A0A1B0GUA5 103 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 LINC01546A6NGU7 62 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 LINC00614P0C842 121 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 MIFP14174 115 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 IFI27P40305 119 aaPredicted RBP4.27□□□□□ -1.73
SDC4P-201ENST00000453285 POLR2KP53803 58 aaKnown RBP4.27□□□□□ -1.73
SDC4P-201ENST00000453285 PDZD11Q5EBL8 140 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 FAM74A4Q5TZK3 123 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 ZFP2Q6ZN57 461 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 CHCHD1Q96BP2 118 aaKnown RBP4.27□□□□□ -1.73
SDC4P-201ENST00000453285 ZNF479Q96JC4 524 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 HIST1H2BLQ99880 126 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 Q9UF83 564 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 TP53TG1Q9Y2A0 90 aa4.27□□□□□ -1.73
SDC4P-201ENST00000453285 A0A096LNJ9 63 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 GAGE12BA1L429 117 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 F5H697 171 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 RHODO00212 210 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 GAGE7O76087 117 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 IGHV3-53P01767 116 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 GAGE12FP0CL80 117 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 GAGE12GP0CL81 117 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 GAGE12IP0CL82 117 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 P0DMU3 169 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 FAM231AP0DMU4 169 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 FAM231CP0DMU5 169 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 EMP1P54849 157 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 RPL32P62910 135 aaKnown RBP4.26□□□□□ -1.73
SDC4P-201ENST00000453285 ZNF56Q15929 161 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 LCE2DQ5TA82 110 aaPredicted RBP4.26□□□□□ -1.73
SDC4P-201ENST00000453285 SBSPONQ8IVN8 264 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 FAM19A2Q8N3H0 131 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 Q8N8P6 123 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 OR4C5Q8NGB2 326 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms