RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 EBI3Q14213 229 aa3.08□□□□□ -1.92
HMGB3P22-202ENST00000451823 LINC01620Q4KN68 170 aa3.08□□□□□ -1.92
HMGB3P22-202ENST00000451823 GAGE2EQ4V326 116 aa3.08□□□□□ -1.92
HMGB3P22-202ENST00000451823 C2orf66Q6UXQ4 117 aa3.08□□□□□ -1.92
HMGB3P22-202ENST00000451823 APRG1Q8IVJ8 170 aa3.08□□□□□ -1.92
HMGB3P22-202ENST00000451823 FDCSPQ8NFU4 85 aa3.08□□□□□ -1.92
HMGB3P22-202ENST00000451823 FAM19A4Q96LR4 140 aa3.08□□□□□ -1.92
HMGB3P22-202ENST00000451823 LINC01587Q99440 93 aa3.08□□□□□ -1.92
HMGB3P22-202ENST00000451823 GAGE2DQ9UEU5 116 aa3.08□□□□□ -1.92
HMGB3P22-202ENST00000451823 RALYQ9UKM9 306 aaKnown RBP3.08□□□□□ -1.92
HMGB3P22-202ENST00000451823 KIF25-AS1Q9Y6Z4 181 aa3.08□□□□□ -1.92
HMGB3P22-202ENST00000451823 CADP27708 2225 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 FAM186AA6NE01 2351 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 LOC107984156A0A0G2JMH3 177 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 TRBV10-2A0A0K0K1G8 114 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 ODF3BA8MYP8 253 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 A8MZ25 164 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 LGALS9O00182 355 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 TIMM23O14925 209 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 IFITM1P13164 125 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 POLR2KP53803 58 aaKnown RBP3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 UCNP55089 124 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 SEC61GP60059 68 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 HERVK_113P61574 105 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 NDPQ00604 133 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 SRSF9Q13242 221 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 PMVKQ15126 192 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 ZNF876PQ49A33 203 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 PIK3CD-AS1Q5SR53 167 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 PRR9Q5T870 116 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 SDIM1Q6ZPB5 146 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 ARL17AQ8IVW1 177 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 KLHL30-AS1Q8NEE0 82 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 MRAPQ8TCY5 172 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 ITLN2Q8WWU7 325 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 NRGNQ92686 78 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 RNASE6Q93091 150 aaKnown RBP3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 TIMD4Q96H15 378 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 TMEM141Q96I45 108 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 TIMM17AQ99595 171 aa3.07□□□□□ -1.92
HMGB3P22-202ENST00000451823 TRBV6-5A0A0K0K1A5 114 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 SDHAF1A6NFY7 115 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 H3BT86 120 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 M0R2P5 195 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 LEPROTO15243 131 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 TECTAO75443 2155 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 SNCGO76070 127 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 PPP1R17O96001 155 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 NBL1P41271 181 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 DLX1P56177 255 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 FAM27E3Q08E93 113 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 IGFL3Q6UXB1 125 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 SCGB1D4Q6XE38 83 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 Q6ZQT7 251 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 ZFAND2AQ8N6M9 145 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 C15orf53Q8NAA6 179 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 OR10J6PQ8NGY7 276 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 ZNRF2Q8NHG8 242 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 AHCTF1Q8WYP5 2266 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 RPL39LQ96EH5 51 aaKnown RBP3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 LITAFQ99732 161 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 SPANXDQ9BXN6 97 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 TMEM126AQ9H061 195 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 DPH3P1Q9H4G8 78 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 DPM3Q9P2X0 92 aa3.06□□□□□ -1.92
HMGB3P22-202ENST00000451823 BDP1A6H8Y1 2624 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 TRAV8-4A0A0B4J246 113 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 TMEM223A0PJW6 202 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 OOSP1A8MZH6 123 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 C9JAW5 83 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 H3BVH4 76 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 J3QQQ9 107 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 SOCS3O14543 225 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 CDX4O14627 284 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 RS1O15537 224 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 DUSP14O95147 198 aaKnown RBP3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 CNIH1O95406 144 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 IGKV3-20P01619 116 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 IGHV1-69P01742 117 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 RNASE3P12724 160 aaKnown RBP3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 ATXN8Q156A1 80 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 TTC32Q5I0X7 151 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 SPANXN1Q5VSR9 72 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 FAM159AQ6UWV7 190 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 TRPT1Q86TN4 253 aaKnown RBP3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 SMIM20Q8N5G0 67 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 RNF182Q8N6D2 247 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 C14orf178Q8N769 122 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 FAM110DQ8TAY7 271 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 FAM57AQ8TBR7 257 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 CCL17Q92583 94 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 IMUPQ9GZP8 106 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 VPREB3Q9UKI3 123 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 S4R3C0 116 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 ABCA1O95477 2261 aa3.05□□□□□ -1.92
HMGB3P22-202ENST00000451823 VPS13AQ96RL7 3174 aa3.04□□□□□ -1.92
HMGB3P22-202ENST00000451823 PLCE1Q9P212 2302 aa3.04□□□□□ -1.92
HMGB3P22-202ENST00000451823 IGHV7-81A0A0B4J1V7 117 aa3.04□□□□□ -1.92
HMGB3P22-202ENST00000451823 TRBV27A0A0K0K1C4 114 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms