RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 KRTAP10-2P60368 255 aa10.5□□□□□ -0.73
LIMS1-210ENST00000449684 SLC51BQ86UW2 128 aa10.5□□□□□ -0.73
LIMS1-210ENST00000449684 C14orf178Q8N769 122 aaPredicted RBP10.5□□□□□ -0.73
LIMS1-210ENST00000449684 TRAV1-1A0A0B4J248 108 aa10.49□□□□□ -0.73
LIMS1-210ENST00000449684 C1QBP02746 253 aa10.49□□□□□ -0.73
LIMS1-210ENST00000449684 SULT1A2P50226 295 aa10.49□□□□□ -0.73
LIMS1-210ENST00000449684 CCL20P78556 96 aa10.49□□□□□ -0.73
LIMS1-210ENST00000449684 RPL19P84098 196 aaKnown RBP10.49□□□□□ -0.73
LIMS1-210ENST00000449684 MLST8Q9BVC4 326 aa10.49□□□□□ -0.73
LIMS1-210ENST00000449684 SCRT2Q9NQ03 307 aa10.49□□□□□ -0.73
LIMS1-210ENST00000449684 PGPEP1Q9NXJ5 209 aa10.49□□□□□ -0.73
LIMS1-210ENST00000449684 CDK2AP2O75956 126 aa10.48□□□□□ -0.73
LIMS1-210ENST00000449684 SPANXN1Q5VSR9 72 aa10.48□□□□□ -0.73
LIMS1-210ENST00000449684 UFSP1Q6NVU6 142 aa10.48□□□□□ -0.73
LIMS1-210ENST00000449684 DAZAP1Q96EP5 407 aaKnown RBP10.48□□□□□ -0.73
LIMS1-210ENST00000449684 Q9HAA7 133 aa10.48□□□□□ -0.73
LIMS1-210ENST00000449684 RYR1P21817 5038 aa10.48□□□□□ -0.73
LIMS1-210ENST00000449684 hCG_2014768A0A024R1R8 64 aa10.47□□□□□ -0.73
LIMS1-210ENST00000449684 A0A087WTM6 91 aa10.47□□□□□ -0.73
LIMS1-210ENST00000449684 A0A087WWC5 75 aa10.47□□□□□ -0.73
LIMS1-210ENST00000449684 IBA57-AS1B1ANH7 110 aa10.47□□□□□ -0.73
LIMS1-210ENST00000449684 SSTP61278 116 aa10.47□□□□□ -0.73
LIMS1-210ENST00000449684 Q6ZNX1 250 aa10.47□□□□□ -0.73
LIMS1-210ENST00000449684 AKAP14Q86UN6 197 aa10.47□□□□□ -0.73
LIMS1-210ENST00000449684 PCLOQ9Y6V0 5065 aa10.46□□□□□ -0.73
LIMS1-210ENST00000449684 PDE6DO43924 150 aa10.46□□□□□ -0.73
LIMS1-210ENST00000449684 CXCL1P09341 107 aa10.46□□□□□ -0.73
LIMS1-210ENST00000449684 RPL36AP83881 106 aaKnown RBP10.46□□□□□ -0.73
LIMS1-210ENST00000449684 ZNF56Q15929 161 aa10.46□□□□□ -0.73
LIMS1-210ENST00000449684 RPL36ALQ969Q0 106 aaKnown RBP10.46□□□□□ -0.73
LIMS1-210ENST00000449684 C11orf52Q96A22 123 aa10.46□□□□□ -0.73
LIMS1-210ENST00000449684 DERL1Q9BUN8 251 aa10.46□□□□□ -0.73
LIMS1-210ENST00000449684 URGCP-MRPS24S4R325 110 aa10.46□□□□□ -0.73
LIMS1-210ENST00000449684 SMIM17P0DL12 118 aa10.45□□□□□ -0.74
LIMS1-210ENST00000449684 GNG4P50150 75 aa10.45□□□□□ -0.74
LIMS1-210ENST00000449684 MEF2BQ02080 365 aaPredicted RBP10.45□□□□□ -0.74
LIMS1-210ENST00000449684 CENPWQ5EE01 88 aa10.45□□□□□ -0.74
LIMS1-210ENST00000449684 CDPF1Q6NVV7 123 aa10.45□□□□□ -0.74
LIMS1-210ENST00000449684 OR10AG1Q8NH19 301 aa10.45□□□□□ -0.74
LIMS1-210ENST00000449684 MED9Q9NWA0 146 aa10.45□□□□□ -0.74
LIMS1-210ENST00000449684 Q9UF83 564 aa10.45□□□□□ -0.74
LIMS1-210ENST00000449684 MUC21A0A0G2JKD1 596 aa10.44□□□□□ -0.74
LIMS1-210ENST00000449684 TRBV10-1A0A0K0K1A3 114 aa10.44□□□□□ -0.74
LIMS1-210ENST00000449684 MUC21A0A140T8X8 626 aa10.44□□□□□ -0.74
LIMS1-210ENST00000449684 F5H697 171 aa10.44□□□□□ -0.74
LIMS1-210ENST00000449684 KCNIP4Q6PIL6 250 aa10.44□□□□□ -0.74
LIMS1-210ENST00000449684 MAPKAPK5-AS1Q8N8E1 139 aa10.44□□□□□ -0.74
LIMS1-210ENST00000449684 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.44□□□□□ -0.74
LIMS1-210ENST00000449684 TPPP3Q9BW30 176 aa10.44□□□□□ -0.74
LIMS1-210ENST00000449684 TM2D2Q9BX73 214 aa10.44□□□□□ -0.74
LIMS1-210ENST00000449684 LRP1BQ9NZR2 4599 aa10.43□□□□□ -0.74
LIMS1-210ENST00000449684 SNAI2O43623 268 aa10.43□□□□□ -0.74
LIMS1-210ENST00000449684 LINC00694P0DN24 101 aa10.43□□□□□ -0.74
LIMS1-210ENST00000449684 BCL2P10415 239 aa10.43□□□□□ -0.74
LIMS1-210ENST00000449684 FUSP35637 526 aaKnown RBP eCLIP10.43□□□□□ -0.74
LIMS1-210ENST00000449684 TAGLN2P37802 199 aaKnown RBP10.43□□□□□ -0.74
LIMS1-210ENST00000449684 RPS20P60866 119 aaKnown RBP10.43□□□□□ -0.74
LIMS1-210ENST00000449684 RAB4BP61018 213 aa10.43□□□□□ -0.74
LIMS1-210ENST00000449684 TOR2AQ5JU69 321 aa10.43□□□□□ -0.74
LIMS1-210ENST00000449684 VAX2Q9UIW0 290 aa10.43□□□□□ -0.74
LIMS1-210ENST00000449684 TRBV7-3A0A075B6L6 115 aa10.42□□□□□ -0.74
LIMS1-210ENST00000449684 XKRY2A2RUG3 117 aa10.42□□□□□ -0.74
LIMS1-210ENST00000449684 RAB19A4D1S5 217 aa10.42□□□□□ -0.74
LIMS1-210ENST00000449684 OR5AL1P0C617 328 aa10.42□□□□□ -0.74
LIMS1-210ENST00000449684 LAGE3Q14657 143 aa10.42□□□□□ -0.74
LIMS1-210ENST00000449684 OR2D3Q8NGH3 330 aa10.42□□□□□ -0.74
LIMS1-210ENST00000449684 SSBP4Q9BWG4 385 aaPredicted RBP10.42□□□□□ -0.74
LIMS1-210ENST00000449684 BIN3Q9NQY0 253 aa10.42□□□□□ -0.74
LIMS1-210ENST00000449684 A0A087WX48 190 aa10.41□□□□□ -0.74
LIMS1-210ENST00000449684 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
LIMS1-210ENST00000449684 SMIM12Q96EX1 92 aa10.41□□□□□ -0.74
LIMS1-210ENST00000449684 KRTAP17-1Q9BYP8 105 aa10.41□□□□□ -0.74
LIMS1-210ENST00000449684 P01737 135 aa10.4□□□□□ -0.74
LIMS1-210ENST00000449684 GZMBP10144 247 aa10.4□□□□□ -0.74
LIMS1-210ENST00000449684 DAZ4Q86SG3 579 aaKnown RBP10.4□□□□□ -0.74
LIMS1-210ENST00000449684 C9orf62Q8N4C0 152 aa10.4□□□□□ -0.74
LIMS1-210ENST00000449684 FER1L6-AS1Q8NA97 138 aa10.4□□□□□ -0.74
LIMS1-210ENST00000449684 AP1S3Q96PC3 154 aa10.4□□□□□ -0.74
LIMS1-210ENST00000449684 DAZ3Q9NR90 486 aaKnown RBP10.4□□□□□ -0.74
LIMS1-210ENST00000449684 UBE2D3P61077 147 aa10.39□□□□□ -0.75
LIMS1-210ENST00000449684 UBE2D2P62837 147 aa10.39□□□□□ -0.75
LIMS1-210ENST00000449684 BLOC1S1P78537 153 aa10.39□□□□□ -0.75
LIMS1-210ENST00000449684 Q8N3U1 123 aa10.39□□□□□ -0.75
LIMS1-210ENST00000449684 DNAH5Q8TE73 4624 aa10.38□□□□□ -0.75
LIMS1-210ENST00000449684 IGLV5-52A0A0A0MRZ9 124 aa10.38□□□□□ -0.75
LIMS1-210ENST00000449684 TMEM262E9PQX1 116 aa10.38□□□□□ -0.75
LIMS1-210ENST00000449684 IGLV2-8P01709 118 aa10.38□□□□□ -0.75
LIMS1-210ENST00000449684 GCSHP23434 173 aa10.38□□□□□ -0.75
LIMS1-210ENST00000449684 ELOBQ15370 118 aa10.38□□□□□ -0.75
LIMS1-210ENST00000449684 ALKAL2Q6UX46 152 aa10.38□□□□□ -0.75
LIMS1-210ENST00000449684 NIT1Q86X76 327 aa10.38□□□□□ -0.75
LIMS1-210ENST00000449684 OR10G8Q8NGN5 311 aa10.38□□□□□ -0.75
LIMS1-210ENST00000449684 RMI2Q96E14 147 aa10.38□□□□□ -0.75
LIMS1-210ENST00000449684 HSPG2P98160 4391 aa10.37□□□□□ -0.75
LIMS1-210ENST00000449684 C19orf71A6NCJ1 209 aa10.37□□□□□ -0.75
LIMS1-210ENST00000449684 RBFOX3A6NFN3 312 aa10.37□□□□□ -0.75
LIMS1-210ENST00000449684 MGPP08493 103 aa10.37□□□□□ -0.75
LIMS1-210ENST00000449684 CACNG7P62955 275 aa10.37□□□□□ -0.75
LIMS1-210ENST00000449684 NEXN-AS1Q8NBZ9 246 aa10.37□□□□□ -0.75
LIMS1-210ENST00000449684 KLK12Q9UKR0 248 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms