RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 APOC3P02656 99 aa7.45□□□□□ -1.22
NPIPB3-202ENST00000448012 SRSF3P84103 164 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-202ENST00000448012 C10orf91Q5T1B1 145 aa7.45□□□□□ -1.22
NPIPB3-202ENST00000448012 LELP1Q5T871 98 aa7.45□□□□□ -1.22
NPIPB3-202ENST00000448012 SEC11CQ9BY50 192 aa7.45□□□□□ -1.22
NPIPB3-202ENST00000448012 EIF5A2Q9GZV4 153 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-202ENST00000448012 GTSF1LQ9H1H1 148 aa7.45□□□□□ -1.22
NPIPB3-202ENST00000448012 PARLQ9H300 379 aa7.45□□□□□ -1.22
NPIPB3-202ENST00000448012 RBFOX3A6NFN3 312 aa7.44□□□□□ -1.22
NPIPB3-202ENST00000448012 PAGE4O60829 102 aa7.44□□□□□ -1.22
NPIPB3-202ENST00000448012 ADCYAP1P18509 176 aa7.44□□□□□ -1.22
NPIPB3-202ENST00000448012 KRTAP10-2P60368 255 aa7.44□□□□□ -1.22
NPIPB3-202ENST00000448012 LINC01556Q5JQF7 62 aa7.44□□□□□ -1.22
NPIPB3-202ENST00000448012 Q6ZRN7 208 aaPredicted RBP7.44□□□□□ -1.22
NPIPB3-202ENST00000448012 SVBPQ8N300 66 aa7.44□□□□□ -1.22
NPIPB3-202ENST00000448012 TNFRSF18Q9Y5U5 241 aa7.44□□□□□ -1.22
NPIPB3-202ENST00000448012 HERC2O95714 4834 aa7.44□□□□□ -1.22
NPIPB3-202ENST00000448012 DNAH11Q96DT5 4516 aa7.44□□□□□ -1.22
NPIPB3-202ENST00000448012 A0A087WTM6 91 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 A0A087WWC5 75 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 TMSB15BA0A087X1C1 80 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 TRBV6-1A0A0K0K1D8 114 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 GAGE12JA6NER3 117 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 ARMS2P0C7Q2 107 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 BCL2P10415 239 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 TAGLN2P37802 199 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 CCL20P78556 96 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 GAGE1Q13065 139 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 GAGE4Q13068 117 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 GAGE5Q13069 117 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 GAGE13Q4V321 117 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 FAM74A4Q5TZK3 123 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 KCNIP4Q6PIL6 250 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 ZFP82Q8N141 532 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 ZC2HC1AQ96GY0 325 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 TM2D2Q9BX73 214 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 KRTAP17-1Q9BYP8 105 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 Q9HAA7 133 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 URGCP-MRPS24S4R325 110 aa7.43□□□□□ -1.22
NPIPB3-202ENST00000448012 KIAA1109Q2LD37 5005 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 GRIFINA4D1Z8 144 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 IBA57-AS1B1ANH7 110 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 M0R381 172 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 SNAPINO95295 136 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 LTAP01374 205 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 IGHV3-30P01768 117 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 IGHV3-33P01772 117 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 IGHV3-30-3P0DP02 117 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 IGHV3-30-5P0DP03 117 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 DNLZQ5SXM8 178 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 MANBALQ9NQG1 85 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 GNG13Q9P2W3 67 aa7.42□□□□□ -1.22
NPIPB3-202ENST00000448012 C9JQL5 133 aa7.41□□□□□ -1.22
NPIPB3-202ENST00000448012 SCO1O75880 301 aa7.41□□□□□ -1.22
NPIPB3-202ENST00000448012 ZNF674Q2M3X9 581 aa7.41□□□□□ -1.22
NPIPB3-202ENST00000448012 COX8CQ7Z4L0 72 aa7.41□□□□□ -1.22
NPIPB3-202ENST00000448012 BAGE2Q86Y30 109 aa7.41□□□□□ -1.22
NPIPB3-202ENST00000448012 SCRT2Q9NQ03 307 aa7.41□□□□□ -1.22
NPIPB3-202ENST00000448012 TRAV8-3A0A0A6YYJ7 113 aa7.4□□□□□ -1.22
NPIPB3-202ENST00000448012 NDUFS6O75380 124 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-202ENST00000448012 SRP19P09132 144 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-202ENST00000448012 CRIP1P50238 77 aa7.4□□□□□ -1.22
NPIPB3-202ENST00000448012 RPL36AP83881 106 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-202ENST00000448012 LAGE3Q14657 143 aa7.4□□□□□ -1.22
NPIPB3-202ENST00000448012 RPL36ALQ969Q0 106 aaKnown RBP7.4□□□□□ -1.22
NPIPB3-202ENST00000448012 RMI2Q96E14 147 aa7.4□□□□□ -1.22
NPIPB3-202ENST00000448012 VAX2Q9UIW0 290 aa7.4□□□□□ -1.22
NPIPB3-202ENST00000448012 DYNC1H1Q14204 4646 aaKnown RBP7.4□□□□□ -1.23
NPIPB3-202ENST00000448012 PKHD1P08F94 4074 aa7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 PKD1P98161 4303 aa7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 A0A087WWL8 130 aa7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 IGLV5-52A0A0A0MRZ9 124 aa7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 SCO2A0A1W2PP80 73 aa7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 GCSHP23434 173 aa7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 PRR27Q6MZM9 219 aa7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 Q8N1X5 172 aa7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 NTN5Q8WTR8 489 aaPredicted RBP7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 SFRP2Q96HF1 295 aa7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 JPT2Q9H910 190 aa7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 COX11Q9Y6N1 276 aa7.39□□□□□ -1.23
NPIPB3-202ENST00000448012 A0A087WX48 190 aa7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 TRBV10-1A0A0K0K1A3 114 aa7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 SMIM17P0DL12 118 aa7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 MEF2BQ02080 365 aaPredicted RBP7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 ELOBQ15370 118 aa7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 ZNF56Q15929 161 aa7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 SPANXN1Q5VSR9 72 aa7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 ATRAIDQ6UW56 229 aa7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 Q6ZSN1 163 aa7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 C14orf178Q8N769 122 aaPredicted RBP7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 CLRN3Q8NCR9 226 aa7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 DAZAP1Q96EP5 407 aaKnown RBP7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 SAMD10Q9BYL1 202 aa7.38□□□□□ -1.23
NPIPB3-202ENST00000448012 EPM2AB3EWF7 344 aa7.37□□□□□ -1.23
NPIPB3-202ENST00000448012 F5H697 171 aa7.37□□□□□ -1.23
NPIPB3-202ENST00000448012 TMEM250H0YL14 139 aa7.37□□□□□ -1.23
NPIPB3-202ENST00000448012 CXCL1P09341 107 aa7.37□□□□□ -1.23
NPIPB3-202ENST00000448012 ANAPC16Q96DE5 110 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms