RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 IFI27L1Q96BM0 104 aa1.73□□□□□ -2.13
PMS1-216ENST00000447734 BCORL1Q5H9F3 1711 aa1.73□□□□□ -2.13
PMS1-216ENST00000447734 ARFGEF3Q5TH69 2177 aa1.73□□□□□ -2.13
PMS1-216ENST00000447734 CACNA1GO43497 2377 aa1.72□□□□□ -2.13
PMS1-216ENST00000447734 TRBV6-7A0A0A0MS04 114 aa1.72□□□□□ -2.13
PMS1-216ENST00000447734 PCOTHQ58A44 107 aa1.72□□□□□ -2.13
PMS1-216ENST00000447734 GDF5OSQ5U4N7 250 aa1.72□□□□□ -2.13
PMS1-216ENST00000447734 C5orf38Q86SI9 138 aa1.72□□□□□ -2.13
PMS1-216ENST00000447734 ZNF563Q8TA94 476 aa1.72□□□□□ -2.13
PMS1-216ENST00000447734 INTS1Q8N201 2190 aaKnown RBP1.72□□□□□ -2.13
PMS1-216ENST00000447734 EXPH5Q8NEV8 1989 aa1.72□□□□□ -2.13
PMS1-216ENST00000447734 RBBP6Q7Z6E9 1792 aaKnown RBP1.72□□□□□ -2.13
PMS1-216ENST00000447734 PTPRMP28827 1452 aa1.71□□□□□ -2.14
PMS1-216ENST00000447734 TRAV12-3A0A0B4J271 114 aa1.71□□□□□ -2.14
PMS1-216ENST00000447734 IGKV3D-7A0A0C4DH55 119 aa1.71□□□□□ -2.14
PMS1-216ENST00000447734 IGKV3OR2-268A0A0C4DH90 116 aa1.71□□□□□ -2.14
PMS1-216ENST00000447734 TRBV10-3A0A0K0K1G6 114 aa1.71□□□□□ -2.14
PMS1-216ENST00000447734 HIGD1CA8MV81 97 aa1.71□□□□□ -2.14
PMS1-216ENST00000447734 GNG2P59768 71 aa1.71□□□□□ -2.14
PMS1-216ENST00000447734 UNQ6190/PRO20217Q6UXQ8 127 aa1.71□□□□□ -2.14
PMS1-216ENST00000447734 C10orf82Q8WW14 230 aa1.71□□□□□ -2.14
PMS1-216ENST00000447734 ADGRB2O60241 1585 aa1.71□□□□□ -2.14
PMS1-216ENST00000447734 ABCC10Q5T3U5 1492 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 IFT140Q96RY7 1462 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 UBE2L5PA0A1B0GUS4 154 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 TMEM262E9PQX1 116 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 ZNF609O15014 1411 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 MPC2O95563 127 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 IL9P15248 144 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 UBE2L3P68036 154 aaKnown RBP1.7□□□□□ -2.14
PMS1-216ENST00000447734 DCDP81605 110 aaKnown RBP1.7□□□□□ -2.14
PMS1-216ENST00000447734 COL5A1-AS1Q5SY13 56 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 C4orf33Q8N1A6 199 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 VWDEQ8N2E2 1590 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 ZCCHC13Q8WW36 166 aaKnown RBP1.7□□□□□ -2.14
PMS1-216ENST00000447734 CYSTM1Q9H1C7 97 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 DPH3P1Q9H4G8 78 aa1.7□□□□□ -2.14
PMS1-216ENST00000447734 TNRC6BQ9UPQ9 1833 aaKnown RBP1.69□□□□□ -2.14
PMS1-216ENST00000447734 SSSCA1O60232 199 aa1.69□□□□□ -2.14
PMS1-216ENST00000447734 ATP5EP56381 51 aaPredicted RBP1.69□□□□□ -2.14
PMS1-216ENST00000447734 KRTAP12-1P59990 96 aa1.69□□□□□ -2.14
PMS1-216ENST00000447734 RPL37AP61513 92 aaKnown RBP1.69□□□□□ -2.14
PMS1-216ENST00000447734 CYP2G1PQ6ZSU1 146 aa1.69□□□□□ -2.14
PMS1-216ENST00000447734 SBSPONQ8IVN8 264 aa1.69□□□□□ -2.14
PMS1-216ENST00000447734 SNHG12Q9BXW3 62 aa1.69□□□□□ -2.14
PMS1-216ENST00000447734 BAHCC1Q9P281 2608 aa1.69□□□□□ -2.14
PMS1-216ENST00000447734 CASP8AP2Q9UKL3 1982 aa1.68□□□□□ -2.14
PMS1-216ENST00000447734 CPSF1Q10570 1443 aaKnown RBP1.68□□□□□ -2.14
PMS1-216ENST00000447734 MUC22E2RYF6 1773 aaPredicted RBP1.68□□□□□ -2.14
PMS1-216ENST00000447734 TRAV13-2A0A0B4J235 113 aa1.68□□□□□ -2.14
PMS1-216ENST00000447734 LOC101927531A0A1B0GV80 90 aa1.68□□□□□ -2.14
PMS1-216ENST00000447734 PCNX2A6NKB5 2137 aa1.68□□□□□ -2.14
PMS1-216ENST00000447734 HCG22E2RYF7 251 aa1.68□□□□□ -2.14
PMS1-216ENST00000447734 FXYD4P59646 89 aa1.68□□□□□ -2.14
PMS1-216ENST00000447734 CCL8P80075 99 aa1.68□□□□□ -2.14
PMS1-216ENST00000447734 COMMD6Q7Z4G1 85 aa1.68□□□□□ -2.14
PMS1-216ENST00000447734 OBSCN-AS1Q96MR7 158 aa1.68□□□□□ -2.14
PMS1-216ENST00000447734 CTTNBP2Q8WZ74 1663 aa1.67□□□□□ -2.14
PMS1-216ENST00000447734 LAMB1P07942 1786 aa1.67□□□□□ -2.14
PMS1-216ENST00000447734 TEX49A0A1B0GTD5 131 aa1.67□□□□□ -2.14
PMS1-216ENST00000447734 SNCAP37840 140 aa1.67□□□□□ -2.14
PMS1-216ENST00000447734 AMELYQ99218 206 aa1.67□□□□□ -2.14
PMS1-216ENST00000447734 AP4S1Q9Y587 144 aa1.67□□□□□ -2.14
PMS1-216ENST00000447734 CDK12Q9NYV4 1490 aaPredicted RBP1.67□□□□□ -2.14
PMS1-216ENST00000447734 ZGRF1Q86YA3 2104 aa1.67□□□□□ -2.14
PMS1-216ENST00000447734 COL4A4P53420 1690 aaPredicted RBP1.67□□□□□ -2.14
PMS1-216ENST00000447734 IGKV2-40A0A087WW87 121 aaPredicted RBP1.66□□□□□ -2.14
PMS1-216ENST00000447734 RBAKDNA6NC62 111 aa1.66□□□□□ -2.14
PMS1-216ENST00000447734 H3BQ15 152 aa1.66□□□□□ -2.14
PMS1-216ENST00000447734 SIX6O95475 246 aa1.66□□□□□ -2.14
PMS1-216ENST00000447734 IGKV2D-40P01614 121 aaPredicted RBP1.66□□□□□ -2.14
PMS1-216ENST00000447734 PP632Q6XCG6 107 aa1.66□□□□□ -2.14
PMS1-216ENST00000447734 MYOZ3Q8TDC0 251 aa1.66□□□□□ -2.14
PMS1-216ENST00000447734 ROBO1Q9Y6N7 1651 aa1.66□□□□□ -2.14
PMS1-216ENST00000447734 COL5A1P20908 1838 aaPredicted RBP1.66□□□□□ -2.14
PMS1-216ENST00000447734 C10orf71Q711Q0 1435 aa1.66□□□□□ -2.14
PMS1-216ENST00000447734 IGKV2-29A2NJV5 120 aaPredicted RBP1.65□□□□□ -2.15
PMS1-216ENST00000447734 UBA52P62987 128 aaKnown RBP1.65□□□□□ -2.15
PMS1-216ENST00000447734 XAF1Q6GPH4 301 aa1.65□□□□□ -2.15
PMS1-216ENST00000447734 ZNF818PQ6ZRF7 136 aa1.65□□□□□ -2.15
PMS1-216ENST00000447734 DPY30Q9C005 99 aa1.65□□□□□ -2.15
PMS1-216ENST00000447734 Q9H521 79 aa1.65□□□□□ -2.15
PMS1-216ENST00000447734 SPHKAPQ2M3C7 1700 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 PVALEFA0A1B0GWK0 134 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 LINC00032P0C843 101 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 UBE2D1P51668 147 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 FXYD3Q14802 87 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 KRTAP6-3Q3LI67 103 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 DEFB132Q7Z7B7 95 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 C20orf197Q8N268 126 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 CYP4F30PQ9H0H9 118 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 LINC00312Q9Y6C7 94 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 KDM6BO15054 1643 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 SPAG17Q6Q759 2223 aa1.64□□□□□ -2.15
PMS1-216ENST00000447734 SDK1Q7Z5N4 2213 aa1.63□□□□□ -2.15
PMS1-216ENST00000447734 SNRNP200O75643 2136 aaKnown RBP1.63□□□□□ -2.15
PMS1-216ENST00000447734 SCRIBQ14160 1630 aa1.63□□□□□ -2.15
PMS1-216ENST00000447734 TET1Q8NFU7 2136 aa1.63□□□□□ -2.15
PMS1-216ENST00000447734 AKAP12Q02952 1782 aa1.63□□□□□ -2.15
PMS1-216ENST00000447734 NBDYA0A0U1RRE5 68 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms