RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 GAGE5Q13069 117 aa10.13□□□□□ -0.79
HDAC4-204ENST00000446876 GAGE13Q4V321 117 aa10.13□□□□□ -0.79
HDAC4-204ENST00000446876 TTC32Q5I0X7 151 aa10.13□□□□□ -0.79
HDAC4-204ENST00000446876 SOHLH1Q5JUK2 328 aa10.13□□□□□ -0.79
HDAC4-204ENST00000446876 OR2D3Q8NGH3 330 aa10.13□□□□□ -0.79
HDAC4-204ENST00000446876 DAZAP1Q96EP5 407 aaKnown RBP10.13□□□□□ -0.79
HDAC4-204ENST00000446876 SMIM12Q96EX1 92 aa10.13□□□□□ -0.79
HDAC4-204ENST00000446876 RHODO00212 210 aa10.12□□□□□ -0.79
HDAC4-204ENST00000446876 CEBPGP53567 150 aa10.12□□□□□ -0.79
HDAC4-204ENST00000446876 SSBP4Q9BWG4 385 aaPredicted RBP10.12□□□□□ -0.79
HDAC4-204ENST00000446876 K7EN84 100 aa10.11□□□□□ -0.79
HDAC4-204ENST00000446876 P01737 135 aa10.11□□□□□ -0.79
HDAC4-204ENST00000446876 OR5AL1P0C617 328 aa10.11□□□□□ -0.79
HDAC4-204ENST00000446876 LINC00694P0DN24 101 aa10.11□□□□□ -0.79
HDAC4-204ENST00000446876 TNP2Q05952 138 aa10.11□□□□□ -0.79
HDAC4-204ENST00000446876 SH2D6Q7Z4S9 175 aa10.11□□□□□ -0.79
HDAC4-204ENST00000446876 TPPP3Q9BW30 176 aa10.11□□□□□ -0.79
HDAC4-204ENST00000446876 EIF5A2Q9GZV4 153 aaKnown RBP10.11□□□□□ -0.79
HDAC4-204ENST00000446876 A0A1W2PPQ1 181 aa10.1□□□□□ -0.79
HDAC4-204ENST00000446876 TMEM250H0YL14 139 aa10.1□□□□□ -0.79
HDAC4-204ENST00000446876 IGLC6P0CF74 106 aa10.1□□□□□ -0.79
HDAC4-204ENST00000446876 SPANXN1Q5VSR9 72 aa10.1□□□□□ -0.79
HDAC4-204ENST00000446876 ATP6V0E2Q8NHE4 81 aa10.1□□□□□ -0.79
HDAC4-204ENST00000446876 OCC1Q8TAD7 63 aa10.1□□□□□ -0.79
HDAC4-204ENST00000446876 FAM210AQ96ND0 272 aa10.1□□□□□ -0.79
HDAC4-204ENST00000446876 PKD1P98161 4303 aa10.1□□□□□ -0.79
HDAC4-204ENST00000446876 LINC00315P59091 139 aa10.09□□□□□ -0.79
HDAC4-204ENST00000446876 RPS20P60866 119 aaKnown RBP10.09□□□□□ -0.79
HDAC4-204ENST00000446876 TEX261Q6UWH6 196 aa10.09□□□□□ -0.79
HDAC4-204ENST00000446876 FER1L6-AS1Q8NA97 138 aa10.09□□□□□ -0.79
HDAC4-204ENST00000446876 NUDT10Q8NFP7 164 aa10.09□□□□□ -0.79
HDAC4-204ENST00000446876 NUDT11Q96G61 164 aa10.09□□□□□ -0.79
HDAC4-204ENST00000446876 RNASE7Q9H1E1 156 aaKnown RBP10.09□□□□□ -0.79
HDAC4-204ENST00000446876 TNFRSF18Q9Y5U5 241 aa10.09□□□□□ -0.79
HDAC4-204ENST00000446876 TIRAPP58753 221 aa10.08□□□□□ -0.8
HDAC4-204ENST00000446876 ZNF56Q15929 161 aa10.08□□□□□ -0.8
HDAC4-204ENST00000446876 GTSF1LQ9H1H1 148 aa10.08□□□□□ -0.8
HDAC4-204ENST00000446876 BIN3Q9NQY0 253 aa10.08□□□□□ -0.8
HDAC4-204ENST00000446876 LY96Q9Y6Y9 160 aa10.08□□□□□ -0.8
HDAC4-204ENST00000446876 SRP19P09132 144 aaKnown RBP10.07□□□□□ -0.8
HDAC4-204ENST00000446876 DNAH10OSP0CZ25 163 aa10.07□□□□□ -0.8
HDAC4-204ENST00000446876 OR10J3Q5JRS4 329 aa10.07□□□□□ -0.8
HDAC4-204ENST00000446876 MSRB1Q9NZV6 116 aa10.07□□□□□ -0.8
HDAC4-204ENST00000446876 DNAH11Q96DT5 4516 aa10.07□□□□□ -0.8
HDAC4-204ENST00000446876 PKHD1P08F94 4074 aa10.06□□□□□ -0.8
HDAC4-204ENST00000446876 LELP1Q5T871 98 aa10.06□□□□□ -0.8
HDAC4-204ENST00000446876 SMIM7Q9BQ49 75 aa10.06□□□□□ -0.8
HDAC4-204ENST00000446876 RPP21Q9H633 154 aaKnown RBP10.06□□□□□ -0.8
HDAC4-204ENST00000446876 DYNC1H1Q14204 4646 aaKnown RBP10.06□□□□□ -0.8
HDAC4-204ENST00000446876 TRAV8-6A0A0B4J262 113 aa10.05□□□□□ -0.8
HDAC4-204ENST00000446876 XKRY2A2RUG3 117 aa10.05□□□□□ -0.8
HDAC4-204ENST00000446876 RAB4BP61018 213 aa10.05□□□□□ -0.8
HDAC4-204ENST00000446876 LYZL1Q6UWQ5 148 aa10.05□□□□□ -0.8
HDAC4-204ENST00000446876 Q8N3U1 123 aa10.05□□□□□ -0.8
HDAC4-204ENST00000446876 AP1S3Q96PC3 154 aa10.05□□□□□ -0.8
HDAC4-204ENST00000446876 KIF25-AS1Q9Y6Z4 181 aa10.05□□□□□ -0.8
HDAC4-204ENST00000446876 IGHV3-38A0A0C4DH36 116 aa10.04□□□□□ -0.8
HDAC4-204ENST00000446876 F5H697 171 aa10.04□□□□□ -0.8
HDAC4-204ENST00000446876 IGHV3-30P01768 117 aa10.04□□□□□ -0.8
HDAC4-204ENST00000446876 IGHV3-33P01772 117 aa10.04□□□□□ -0.8
HDAC4-204ENST00000446876 MGPP08493 103 aa10.04□□□□□ -0.8
HDAC4-204ENST00000446876 IGHV3-30-3P0DP02 117 aa10.04□□□□□ -0.8
HDAC4-204ENST00000446876 IGHV3-30-5P0DP03 117 aa10.04□□□□□ -0.8
HDAC4-204ENST00000446876 EVI2AP22794 236 aa10.04□□□□□ -0.8
HDAC4-204ENST00000446876 SRSF3P84103 164 aaKnown RBP10.04□□□□□ -0.8
HDAC4-204ENST00000446876 Q6ZRN7 208 aaPredicted RBP10.04□□□□□ -0.8
HDAC4-204ENST00000446876 TRBV10-1A0A0K0K1A3 114 aa10.03□□□□□ -0.8
HDAC4-204ENST00000446876 ZNF727A8MUV8 499 aa10.03□□□□□ -0.8
HDAC4-204ENST00000446876 C9JQL5 133 aa10.03□□□□□ -0.8
HDAC4-204ENST00000446876 SMIM17P0DL12 118 aa10.03□□□□□ -0.8
HDAC4-204ENST00000446876 CTRLP40313 264 aa10.03□□□□□ -0.8
HDAC4-204ENST00000446876 CACNG7P62955 275 aa10.03□□□□□ -0.8
HDAC4-204ENST00000446876 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
HDAC4-204ENST00000446876 TRAV9-2A0A087WT02 112 aa10.02□□□□□ -0.81
HDAC4-204ENST00000446876 F2Z2F3 143 aa10.02□□□□□ -0.81
HDAC4-204ENST00000446876 GATCO43716 136 aaKnown RBP10.02□□□□□ -0.81
HDAC4-204ENST00000446876 NDUFS6O75380 124 aaKnown RBP10.02□□□□□ -0.81
HDAC4-204ENST00000446876 UBE2D3P61077 147 aa10.02□□□□□ -0.81
HDAC4-204ENST00000446876 UBE2D2P62837 147 aa10.02□□□□□ -0.81
HDAC4-204ENST00000446876 RPL36AP83881 106 aaKnown RBP10.02□□□□□ -0.81
HDAC4-204ENST00000446876 LINC01556Q5JQF7 62 aa10.02□□□□□ -0.81
HDAC4-204ENST00000446876 LINC01551Q86U37 167 aa10.02□□□□□ -0.81
HDAC4-204ENST00000446876 GTSF1Q8WW33 167 aa10.02□□□□□ -0.81
HDAC4-204ENST00000446876 RPL36ALQ969Q0 106 aaKnown RBP10.02□□□□□ -0.81
HDAC4-204ENST00000446876 TRBV7-3A0A075B6L6 115 aa10.01□□□□□ -0.81
HDAC4-204ENST00000446876 BTF3P20290 206 aaKnown RBP10.01□□□□□ -0.81
HDAC4-204ENST00000446876 NTF3P20783 257 aa10.01□□□□□ -0.81
HDAC4-204ENST00000446876 ERVFC1-1P60608 527 aa10.01□□□□□ -0.81
HDAC4-204ENST00000446876 FAM231DQ6ZW35 169 aa10.01□□□□□ -0.81
HDAC4-204ENST00000446876 OR10G8Q8NGN5 311 aa10.01□□□□□ -0.81
HDAC4-204ENST00000446876 SUMO4Q6EEV6 95 aa10□□□□□ -0.81
HDAC4-204ENST00000446876 TRGC1P0CF51 173 aa9.99□□□□□ -0.81
HDAC4-204ENST00000446876 TWIST1Q15672 202 aa9.99□□□□□ -0.81
HDAC4-204ENST00000446876 C10orf126Q8N4M7 172 aa9.99□□□□□ -0.81
HDAC4-204ENST00000446876 A0A087WWC5 75 aa9.98□□□□□ -0.81
HDAC4-204ENST00000446876 K7EP13 123 aa9.98□□□□□ -0.81
HDAC4-204ENST00000446876 PGLYRP4Q96LB8 373 aa9.98□□□□□ -0.81
HDAC4-204ENST00000446876 CNFNQ9BYD5 112 aa9.98□□□□□ -0.81
HDAC4-204ENST00000446876 Q9HAA7 133 aa9.98□□□□□ -0.81
HDAC4-204ENST00000446876 KIAA1109Q2LD37 5005 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms