RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 ISOC2Q96AB3 205 aa12.67□□□□□ -0.38
PHTF1-207ENST00000446739 SAMD10Q9BYL1 202 aa12.67□□□□□ -0.38
PHTF1-207ENST00000446739 MUC21A0A0G2JKD1 596 aa12.66□□□□□ -0.38
PHTF1-207ENST00000446739 MUC21A0A140T8X8 626 aa12.66□□□□□ -0.38
PHTF1-207ENST00000446739 CRYGDP07320 174 aa12.66□□□□□ -0.38
PHTF1-207ENST00000446739 GYPEP15421 78 aa12.66□□□□□ -0.38
PHTF1-207ENST00000446739 CCL18P55774 89 aa12.66□□□□□ -0.38
PHTF1-207ENST00000446739 RHOHQ15669 191 aa12.66□□□□□ -0.38
PHTF1-207ENST00000446739 C15orf54Q8N8G6 183 aa12.66□□□□□ -0.38
PHTF1-207ENST00000446739 SLC25A29Q8N8R3 303 aa12.66□□□□□ -0.38
PHTF1-207ENST00000446739 PRADC1Q9BSG0 188 aa12.66□□□□□ -0.38
PHTF1-207ENST00000446739 A0A087WWL8 130 aa12.65□□□□□ -0.38
PHTF1-207ENST00000446739 CTRLP40313 264 aa12.65□□□□□ -0.38
PHTF1-207ENST00000446739 FAM74A4Q5TZK3 123 aa12.65□□□□□ -0.38
PHTF1-207ENST00000446739 WDR73Q6P4I2 378 aa12.65□□□□□ -0.38
PHTF1-207ENST00000446739 UQCC3Q6UW78 93 aa12.65□□□□□ -0.38
PHTF1-207ENST00000446739 LYZL1Q6UWQ5 148 aa12.65□□□□□ -0.38
PHTF1-207ENST00000446739 AP1S3Q96PC3 154 aa12.65□□□□□ -0.38
PHTF1-207ENST00000446739 DNAH6Q9C0G6 4158 aa12.65□□□□□ -0.38
PHTF1-207ENST00000446739 K7EQD1 137 aa12.64□□□□□ -0.39
PHTF1-207ENST00000446739 FAM3BP58499 235 aaPredicted RBP12.64□□□□□ -0.39
PHTF1-207ENST00000446739 SSTP61278 116 aa12.64□□□□□ -0.39
PHTF1-207ENST00000446739 KMT2AQ03164 3969 aa12.64□□□□□ -0.39
PHTF1-207ENST00000446739 SRIP30626 198 aa12.63□□□□□ -0.39
PHTF1-207ENST00000446739 OR10G8Q8NGN5 311 aa12.63□□□□□ -0.39
PHTF1-207ENST00000446739 CNFNQ9BYD5 112 aa12.63□□□□□ -0.39
PHTF1-207ENST00000446739 FAM231BA6NCW3 169 aa12.62□□□□□ -0.39
PHTF1-207ENST00000446739 SMIM17P0DL12 118 aa12.62□□□□□ -0.39
PHTF1-207ENST00000446739 FOXA3P55318 350 aaPredicted RBP12.62□□□□□ -0.39
PHTF1-207ENST00000446739 Q6ZSN1 163 aa12.62□□□□□ -0.39
PHTF1-207ENST00000446739 NEGR1Q7Z3B1 354 aa12.62□□□□□ -0.39
PHTF1-207ENST00000446739 SH2D6Q7Z4S9 175 aa12.62□□□□□ -0.39
PHTF1-207ENST00000446739 TSKUQ8WUA8 353 aa12.62□□□□□ -0.39
PHTF1-207ENST00000446739 GTSF1Q8WW33 167 aa12.62□□□□□ -0.39
PHTF1-207ENST00000446739 GFRA4Q9GZZ7 299 aa12.62□□□□□ -0.39
PHTF1-207ENST00000446739 LINC00588Q9Y4M8 146 aa12.62□□□□□ -0.39
PHTF1-207ENST00000446739 V9GYV3 84 aa12.62□□□□□ -0.39
PHTF1-207ENST00000446739 LOC100131303A0A0U1RQF7 123 aa12.61□□□□□ -0.39
PHTF1-207ENST00000446739 TRGC1P0CF51 173 aa12.61□□□□□ -0.39
PHTF1-207ENST00000446739 NTF3P20783 257 aa12.61□□□□□ -0.39
PHTF1-207ENST00000446739 ESRGQ1W209 222 aa12.61□□□□□ -0.39
PHTF1-207ENST00000446739 C14orf178Q8N769 122 aaPredicted RBP12.61□□□□□ -0.39
PHTF1-207ENST00000446739 RAB4BP61018 213 aa12.6□□□□□ -0.39
PHTF1-207ENST00000446739 PNRC1Q12796 327 aaPredicted RBP12.6□□□□□ -0.39
PHTF1-207ENST00000446739 COMMD7Q86VX2 200 aa12.6□□□□□ -0.39
PHTF1-207ENST00000446739 MSRB1Q9NZV6 116 aa12.6□□□□□ -0.39
PHTF1-207ENST00000446739 KIF25-AS1Q9Y6Z4 181 aa12.6□□□□□ -0.39
PHTF1-207ENST00000446739 LINC00862A6NCI5 91 aa12.59□□□□□ -0.39
PHTF1-207ENST00000446739 ZNF56Q15929 161 aa12.59□□□□□ -0.39
PHTF1-207ENST00000446739 PGLYRP4Q96LB8 373 aa12.59□□□□□ -0.39
PHTF1-207ENST00000446739 MRPS16Q9Y3D3 137 aaKnown RBP12.59□□□□□ -0.39
PHTF1-207ENST00000446739 TRBV10-1A0A0K0K1A3 114 aa12.58□□□□□ -0.4
PHTF1-207ENST00000446739 HIGD1CA8MV81 97 aa12.58□□□□□ -0.4
PHTF1-207ENST00000446739 TWIST1Q15672 202 aa12.58□□□□□ -0.4
PHTF1-207ENST00000446739 LYPD5Q6UWN5 251 aa12.58□□□□□ -0.4
PHTF1-207ENST00000446739 BORCS7Q96B45 105 aa12.58□□□□□ -0.4
PHTF1-207ENST00000446739 UPK3BQ9BT76 320 aa12.58□□□□□ -0.4
PHTF1-207ENST00000446739 TMEM218A2RU14 115 aa12.57□□□□□ -0.4
PHTF1-207ENST00000446739 ZNRF2Q8NHG8 242 aa12.57□□□□□ -0.4
PHTF1-207ENST00000446739 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
PHTF1-207ENST00000446739 F5H697 171 aa12.56□□□□□ -0.4
PHTF1-207ENST00000446739 EVI2AP22794 236 aa12.56□□□□□ -0.4
PHTF1-207ENST00000446739 TIRAPP58753 221 aa12.56□□□□□ -0.4
PHTF1-207ENST00000446739 LINC00315P59091 139 aa12.56□□□□□ -0.4
PHTF1-207ENST00000446739 A0A1B0GUT8 65 aa12.55□□□□□ -0.4
PHTF1-207ENST00000446739 GAGE12JA6NER3 117 aa12.55□□□□□ -0.4
PHTF1-207ENST00000446739 PPP1R2P9O14990 202 aa12.55□□□□□ -0.4
PHTF1-207ENST00000446739 LINC00694P0DN24 101 aa12.55□□□□□ -0.4
PHTF1-207ENST00000446739 GAGE1Q13065 139 aa12.55□□□□□ -0.4
PHTF1-207ENST00000446739 GAGE4Q13068 117 aa12.55□□□□□ -0.4
PHTF1-207ENST00000446739 GAGE5Q13069 117 aa12.55□□□□□ -0.4
PHTF1-207ENST00000446739 GAGE13Q4V321 117 aa12.55□□□□□ -0.4
PHTF1-207ENST00000446739 SMIM15Q7Z3B0 74 aa12.55□□□□□ -0.4
PHTF1-207ENST00000446739 ATP6V0E2Q8NHE4 81 aa12.55□□□□□ -0.4
PHTF1-207ENST00000446739 NAT8BQ9UHF3 227 aa12.55□□□□□ -0.4
PHTF1-207ENST00000446739 SMIM27A0A1W2PRY6 76 aa12.54□□□□□ -0.4
PHTF1-207ENST00000446739 F8W036 122 aa12.54□□□□□ -0.4
PHTF1-207ENST00000446739 MGPP08493 103 aa12.54□□□□□ -0.4
PHTF1-207ENST00000446739 ADCYAP1P18509 176 aa12.54□□□□□ -0.4
PHTF1-207ENST00000446739 RPL36AP83881 106 aaKnown RBP12.54□□□□□ -0.4
PHTF1-207ENST00000446739 RPL36ALQ969Q0 106 aaKnown RBP12.54□□□□□ -0.4
PHTF1-207ENST00000446739 Q9UF83 564 aa12.54□□□□□ -0.4
PHTF1-207ENST00000446739 NUP35Q8NFH5 326 aa12.53□□□□□ -0.4
PHTF1-207ENST00000446739 SEC11CQ9BY50 192 aa12.53□□□□□ -0.4
PHTF1-207ENST00000446739 Q9H8V8 135 aa12.53□□□□□ -0.4
PHTF1-207ENST00000446739 IGLV2-18A0A075B6J9 118 aa12.52□□□□□ -0.41
PHTF1-207ENST00000446739 TRBV7-3A0A075B6L6 115 aa12.52□□□□□ -0.41
PHTF1-207ENST00000446739 H7C1H1 209 aa12.52□□□□□ -0.41
PHTF1-207ENST00000446739 MT-ND4LP03901 98 aa12.52□□□□□ -0.41
PHTF1-207ENST00000446739 RIGQ13278 110 aa12.52□□□□□ -0.41
PHTF1-207ENST00000446739 GTSF1LQ9H1H1 148 aa12.52□□□□□ -0.41
PHTF1-207ENST00000446739 SUMO4Q6EEV6 95 aa12.51□□□□□ -0.41
PHTF1-207ENST00000446739 NEXN-AS1Q8NBZ9 246 aa12.51□□□□□ -0.41
PHTF1-207ENST00000446739 ANAPC16Q96DE5 110 aa12.51□□□□□ -0.41
PHTF1-207ENST00000446739 M0QY20 66 aa12.5□□□□□ -0.41
PHTF1-207ENST00000446739 SIVA1O15304 175 aa12.49□□□□□ -0.41
PHTF1-207ENST00000446739 UBE2D3P61077 147 aa12.49□□□□□ -0.41
PHTF1-207ENST00000446739 UBE2D2P62837 147 aa12.49□□□□□ -0.41
PHTF1-207ENST00000446739 LELP1Q5T871 98 aa12.49□□□□□ -0.41
PHTF1-207ENST00000446739 TMEM191AQ9H0A3 160 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms