RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 A8MTW9 85 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 G3V3Q6 166 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 PDE6DO43924 150 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 NUDT3O95989 172 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 IFNA1P01562 189 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 SLC25A5P05141 298 aaKnown RBP4.87□□□□□ -1.63
HDAC9-216ENST00000446646 GCHFRP30047 84 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 RAB5CP51148 216 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 IFITM2Q01629 132 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 SPINK13Q1W4C9 94 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 RRN3P1Q2M238 152 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 TMUB2Q71RG4 321 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 BAP18Q8IXM2 172 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 EXOC3-AS1Q8N2X6 119 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 PHYHIPLQ96FC7 376 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 ST6GAL2Q96JF0 529 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 NIPSNAP3BQ9BS92 247 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 NDFIP1Q9BT67 221 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 MAP1LC3BQ9GZQ8 125 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 SLC35B3Q9H1N7 401 aa4.87□□□□□ -1.63
HDAC9-216ENST00000446646 PGPA6NDG6 321 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 ZNF705FA8MVS1 300 aaPredicted RBP4.86□□□□□ -1.63
HDAC9-216ENST00000446646 F6UZH7 168 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 H7BYZ3 331 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 K7EN84 100 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 K7ERU9 68 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 M0R2Z0 102 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 M0R3E3 92 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 VCYO14598 125 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 HMGB3O15347 200 aaKnown RBP4.86□□□□□ -1.63
HDAC9-216ENST00000446646 NDUFB4O95168 129 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 TYMSP04818 313 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 NMBP08949 121 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 SULT1A2P50226 295 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 FXYD7P58549 80 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 LGALSLQ3ZCW2 172 aaPredicted RBP4.86□□□□□ -1.63
HDAC9-216ENST00000446646 Q6ZRN7 208 aaPredicted RBP4.86□□□□□ -1.63
HDAC9-216ENST00000446646 C5orf17Q8NAS9 161 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 OR11H4Q8NGC9 324 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 LYPD6BQ8NI32 183 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 FAM213BQ8TBF2 198 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 LENEPQ9Y5L5 61 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 ARL2-SNX15V9GYD0 113 aa4.86□□□□□ -1.63
HDAC9-216ENST00000446646 A0A1W2PRE2 83 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 IFNA7P01567 189 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 GPX1P07203 203 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 ZNF705DP0CH99 300 aaPredicted RBP4.85□□□□□ -1.63
HDAC9-216ENST00000446646 ZNF705BP0CI00 300 aaPredicted RBP4.85□□□□□ -1.63
HDAC9-216ENST00000446646 DNAH10OSP0CZ25 163 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 ASIPP42127 132 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 ZNF138P52744 262 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 DEFB1P60022 68 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 FOXI1Q12951 378 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 FAM222AQ5U5X8 452 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 AMTNQ6UX39 209 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 ZNF705AQ6ZN79 300 aaPredicted RBP4.85□□□□□ -1.63
HDAC9-216ENST00000446646 C9orf47Q6ZRZ4 202 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 SFT2D1Q8WV19 159 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 TMED6Q8WW62 240 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 C16orf74Q96GX8 76 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 LINC01587Q99440 93 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 CYTL1Q9NRR1 136 aa4.85□□□□□ -1.63
HDAC9-216ENST00000446646 TRAV12-2A0A075B6T6 113 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 IGKV2-40A0A087WW87 121 aaPredicted RBP4.84□□□□□ -1.63
HDAC9-216ENST00000446646 C7orf71A4D174 169 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 IGKV2D-40P01614 121 aaPredicted RBP4.84□□□□□ -1.63
HDAC9-216ENST00000446646 NPSP0C0P6 89 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 SPART-AS1P0CW21 52 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 PKIAP61925 76 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 TAL2Q16559 108 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 TMEM97Q5BJF2 176 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 ZNF493Q6ZR52 646 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 GOLT1AQ6ZVE7 132 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 SMIM20Q8N5G0 67 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 CYB561D1Q8N8Q1 229 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 OR13C6PQ8NH95 151 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 PYGO2Q9BRQ0 406 aa4.84□□□□□ -1.63
HDAC9-216ENST00000446646 LYRM9A8MSI8 78 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 SNURFLB1AK76 121 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 PRAC2D3DTV9 90 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 TCRAP04437 139 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 CT45A10P0DMU9 189 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 PRB4P10163 310 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-216ENST00000446646 HTN1P15515 57 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 CRISP2P16562 243 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 DDTP30046 118 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 CKS1BP61024 79 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 UBE2G1P62253 170 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 GFI1BQ5VTD9 330 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 C15orf53Q8NAA6 179 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 TMEM263Q8WUH6 116 aaKnown RBP4.83□□□□□ -1.64
HDAC9-216ENST00000446646 HIST1H2BAQ96A08 127 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 TXNDC17Q9BRA2 123 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 Q9H8V8 135 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 MANBALQ9NQG1 85 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 ZNF492Q9P255 531 aa4.83□□□□□ -1.64
HDAC9-216ENST00000446646 TRAV12-3A0A0B4J271 114 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 KLLNB2CW77 178 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 CRXO43186 299 aaPredicted RBP4.82□□□□□ -1.64
HDAC9-216ENST00000446646 GATA1P15976 413 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms