RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 SNHG12Q9BXW3 62 aa5.4□□□□□ -1.54
SF3A3P1-201ENST00000446317 TENM3Q9P273 2699 aa5.4□□□□□ -1.55
SF3A3P1-201ENST00000446317 A0A087WWL8 130 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 COL5A1-AS1Q5SY13 56 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 TMEM263Q8WUH6 116 aaKnown RBP5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 KCNS1Q96KK3 526 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 VPS25Q9BRG1 176 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 SAMD10Q9BYL1 202 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 OSTCQ9NRP0 149 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 PHLDA3Q9Y5J5 127 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 LY96Q9Y6Y9 160 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 U3KQK5 164 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 HIGD1CA8MV81 97 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 K7ERU9 68 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 MIFP14174 115 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 SLAQ13239 276 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 RHEBQ15382 184 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 TWIST1Q15672 202 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 ZNF876PQ49A33 203 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 FAM74A4Q5TZK3 123 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 SPANXN1Q5VSR9 72 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 ZFAND6Q6FIF0 208 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 FAM231DQ6ZW35 169 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 OR10D4PQ8NGN7 298 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 DEFB104AQ8WTQ1 72 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 C20orf144Q9BQM9 153 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 TP53TG1Q9Y2A0 90 aa5.39□□□□□ -1.55
SF3A3P1-201ENST00000446317 TRGV2A0A075B6R0 118 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 MGPP08493 103 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 IGLC6P0CF74 106 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 CAMPP49913 170 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 DAD1P61803 113 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 PNRC1Q12796 327 aaPredicted RBP5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 C12orf74Q32Q52 190 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 TDRG1Q3Y452 100 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 Q6ZTC4 211 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 C14orf178Q8N769 122 aaPredicted RBP5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 NUP35Q8NFH5 326 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 IL17DQ8TAD2 202 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 TSKUQ8WUA8 353 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 C9orf85Q96MD7 179 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 IL36BQ9NZH7 164 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 DKK2Q9UBU2 259 aa5.38□□□□□ -1.55
SF3A3P1-201ENST00000446317 TGIF2-C20orf24A0A0A6YYL0 155 aa5.37□□□□□ -1.55
SF3A3P1-201ENST00000446317 A0A0J9YY99 117 aa5.37□□□□□ -1.55
SF3A3P1-201ENST00000446317 A8MWL6 223 aa5.37□□□□□ -1.55
SF3A3P1-201ENST00000446317 NTF3P20783 257 aa5.37□□□□□ -1.55
SF3A3P1-201ENST00000446317 PTTG1IPP53801 180 aa5.37□□□□□ -1.55
SF3A3P1-201ENST00000446317 Q6ZSN1 163 aa5.37□□□□□ -1.55
SF3A3P1-201ENST00000446317 C11orf45Q8TAV5 145 aa5.37□□□□□ -1.55
SF3A3P1-201ENST00000446317 LINC00467Q9BRT7 94 aa5.37□□□□□ -1.55
SF3A3P1-201ENST00000446317 ALKBH7Q9BT30 221 aaPredicted RBP5.37□□□□□ -1.55
SF3A3P1-201ENST00000446317 SSBP4Q9BWG4 385 aaPredicted RBP5.37□□□□□ -1.55
SF3A3P1-201ENST00000446317 TRAV26-2A0A0B4J265 109 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 LOC100131303A0A0U1RQF7 123 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 SMIM27A0A1W2PRY6 76 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 SMIM9A6NGZ8 99 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 F5H768 121 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 SMKR1H3BMG3 65 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 M0R2P5 195 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 SPART-AS1P0CW21 52 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 P0DMU3 169 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 FAM231AP0DMU4 169 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 FAM231CP0DMU5 169 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 UBE2V1Q13404 147 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 ZNF493Q6ZR52 646 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 HIST3H2BBQ8N257 126 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 ZNF664Q8N3J9 261 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 POM121L12Q8N7R1 296 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 PRO1933Q9H354 126 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 Q9UF83 564 aa5.36□□□□□ -1.55
SF3A3P1-201ENST00000446317 A0A096LPF7 62 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 IFITM10A6NMD0 228 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 F5H697 171 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 EIF4EBP3O60516 100 aaPredicted RBP5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 NCR2O95944 276 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 CXCL1P09341 107 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 NHLRC4P0CG21 123 aaPredicted RBP5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 EVI2AP22794 236 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 CTRLP40313 264 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 IQCJQ1A5X6 159 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 SYT8Q8NBV8 401 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 OR4C5Q8NGB2 326 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 BORCS7Q96B45 105 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 SCRT2Q9NQ03 307 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 NAT8BQ9UHF3 227 aa5.35□□□□□ -1.55
SF3A3P1-201ENST00000446317 TRGV4A0A0C4DH28 118 aa5.34□□□□□ -1.55
SF3A3P1-201ENST00000446317 PHOX2AO14813 284 aa5.34□□□□□ -1.55
SF3A3P1-201ENST00000446317 SNAI2O43623 268 aa5.34□□□□□ -1.55
SF3A3P1-201ENST00000446317 GAS8-AS1O95177 125 aa5.34□□□□□ -1.55
SF3A3P1-201ENST00000446317 GATA1P15976 413 aaPredicted RBP5.34□□□□□ -1.55
SF3A3P1-201ENST00000446317 DAZ2Q13117 558 aaKnown RBP5.34□□□□□ -1.55
SF3A3P1-201ENST00000446317 ZNF56Q15929 161 aa5.34□□□□□ -1.55
SF3A3P1-201ENST00000446317 CFAP126Q5VTH2 177 aa5.34□□□□□ -1.55
SF3A3P1-201ENST00000446317 IMMP2LQ96T52 175 aa5.34□□□□□ -1.55
SF3A3P1-201ENST00000446317 C11orf68Q9H3H3 251 aaKnown RBP5.34□□□□□ -1.55
SF3A3P1-201ENST00000446317 EDA2RQ9HAV5 297 aa5.34□□□□□ -1.55
SF3A3P1-201ENST00000446317 A0A1B0GUT8 65 aa5.33□□□□□ -1.56
SF3A3P1-201ENST00000446317 LYRM9A8MSI8 78 aa5.33□□□□□ -1.56
SF3A3P1-201ENST00000446317 OR5AL1P0C617 328 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms