RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 TMEM61Q8N0U2 210 aa14.43□□□□□ -0.1
SHANK3-203ENST00000445220 DAND5Q8N907 189 aa14.43□□□□□ -0.1
SHANK3-203ENST00000445220 U3KQE9 123 aa14.43□□□□□ -0.1
SHANK3-203ENST00000445220 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.42□□□□□ -0.12e-6■■■□□ 16.6
SHANK3-203ENST00000445220 MP68P56378 58 aa14.42□□□□□ -0.1
SHANK3-203ENST00000445220 LECT2O14960 151 aa14.42□□□□□ -0.1
SHANK3-203ENST00000445220 EML6Q6ZMW3 1958 aa14.42□□□□□ -0.1
SHANK3-203ENST00000445220 GTF3C1Q12789 2109 aa14.41□□□□□ -0.1
SHANK3-203ENST00000445220 C5orf38Q86SI9 138 aa14.41□□□□□ -0.1
SHANK3-203ENST00000445220 LHBP01229 141 aa14.41□□□□□ -0.1
SHANK3-203ENST00000445220 LOXL1Q08397 574 aaPredicted RBP14.41□□□□□ -0.1
SHANK3-203ENST00000445220 MALRD1Q5VYJ5 2156 aa14.4□□□□□ -0.1
SHANK3-203ENST00000445220 ELANEP08246 267 aa14.4□□□□□ -0.1
SHANK3-203ENST00000445220 NREPQ16612 68 aa14.4□□□□□ -0.1
SHANK3-203ENST00000445220 CLPSL2Q6UWE3 100 aa14.4□□□□□ -0.1
SHANK3-203ENST00000445220 VSIG2Q96IQ7 327 aa14.4□□□□□ -0.1
SHANK3-203ENST00000445220 MED14OSP0DP75 135 aa14.4□□□□□ -0.1
SHANK3-203ENST00000445220 IGLV11-55A0A075B6I3 123 aa14.4□□□□□ -0.1
SHANK3-203ENST00000445220 IGLV2-14P01704 120 aa14.4□□□□□ -0.1
SHANK3-203ENST00000445220 CHD8Q9HCK8 2581 aa14.39□□□□□ -0.11
SHANK3-203ENST00000445220 BUB3O43684 328 aa14.39□□□□□ -0.11
SHANK3-203ENST00000445220 HIST2H2BCQ6DN03 193 aa14.39□□□□□ -0.11
SHANK3-203ENST00000445220 CTSZQ9UBR2 303 aa14.39□□□□□ -0.11
SHANK3-203ENST00000445220 IGLV2-8P01709 118 aa14.39□□□□□ -0.11
SHANK3-203ENST00000445220 CTSGP08311 255 aa14.39□□□□□ -0.11
SHANK3-203ENST00000445220 DENND4CQ5VZ89 1909 aa14.38□□□□□ -0.11
SHANK3-203ENST00000445220 WI2-2373I1.2A0A1W2PRP0 233 aa14.38□□□□□ -0.11
SHANK3-203ENST00000445220 KMT2EQ8IZD2 1858 aa14.38□□□□□ -0.11
SHANK3-203ENST00000445220 IGHV1-58A0A0C4DH39 117 aa14.38□□□□□ -0.11
SHANK3-203ENST00000445220 GDF5OSQ5U4N7 250 aa14.38□□□□□ -0.11
SHANK3-203ENST00000445220 ZNF503Q96F45 646 aa14.38□□□□□ -0.11
SHANK3-203ENST00000445220 WT1P19544 449 aaPredicted RBP14.37□□□□□ -0.11
SHANK3-203ENST00000445220 C9orf47Q6ZRZ4 202 aa14.37□□□□□ -0.11
SHANK3-203ENST00000445220 Q96MF0 132 aa14.37□□□□□ -0.11
SHANK3-203ENST00000445220 DEFB105AQ8NG35 78 aa14.37□□□□□ -0.11
SHANK3-203ENST00000445220 C3orf22Q8N5N4 141 aa14.37□□□□□ -0.11
SHANK3-203ENST00000445220 NPBQ8NG41 125 aa14.36□□□□□ -0.11
SHANK3-203ENST00000445220 PRAC2D3DTV9 90 aa14.36□□□□□ -0.11
SHANK3-203ENST00000445220 IGLC6P0CF74 106 aa14.36□□□□□ -0.11
SHANK3-203ENST00000445220 TP73-AS1Q9UF72 201 aa14.36□□□□□ -0.11
SHANK3-203ENST00000445220 TNRC6AQ8NDV7 1962 aaKnown RBP14.36□□□□□ -0.11
SHANK3-203ENST00000445220 PLXNB3Q9ULL4 1909 aa14.36□□□□□ -0.11
SHANK3-203ENST00000445220 TP53TG3Q9ULZ0 132 aa14.36□□□□□ -0.11
SHANK3-203ENST00000445220 TEX49A0A1B0GTD5 131 aa14.35□□□□□ -0.11
SHANK3-203ENST00000445220 SPATA25Q9BR10 227 aa14.35□□□□□ -0.11
SHANK3-203ENST00000445220 DKK4Q9UBT3 224 aa14.35□□□□□ -0.11
SHANK3-203ENST00000445220 ODF3L1Q8IXM7 274 aa14.35□□□□□ -0.11
SHANK3-203ENST00000445220 NOP10Q9NPE3 64 aaKnown RBP14.34□□□□□ -0.11
SHANK3-203ENST00000445220 DAZ2Q13117 558 aaKnown RBP14.34□□□□□ -0.11
SHANK3-203ENST00000445220 C16orf54Q6UWD8 224 aa14.34□□□□□ -0.11
SHANK3-203ENST00000445220 DAZ4Q86SG3 579 aaKnown RBP14.34□□□□□ -0.11
SHANK3-203ENST00000445220 RNF152Q8N8N0 203 aa14.34□□□□□ -0.11
SHANK3-203ENST00000445220 DAZ3Q9NR90 486 aaKnown RBP14.34□□□□□ -0.11
SHANK3-203ENST00000445220 PRB2P02812 416 aaPredicted RBP14.34□□□□□ -0.11
SHANK3-203ENST00000445220 HOXB4P17483 251 aaPredicted RBP14.34□□□□□ -0.11
SHANK3-203ENST00000445220 A0A096LPF7 62 aa14.34□□□□□ -0.11
SHANK3-203ENST00000445220 TMEM256-PLSCR3K7ERE1 68 aa14.34□□□□□ -0.11
SHANK3-203ENST00000445220 IGHV3-30-3P0DP02 117 aa14.34□□□□□ -0.11
SHANK3-203ENST00000445220 MIAQ16674 131 aa14.34□□□□□ -0.11
SHANK3-203ENST00000445220 NDUFS5O43920 106 aa14.33□□□□□ -0.12
SHANK3-203ENST00000445220 PLCE1Q9P212 2302 aa14.33□□□□□ -0.12
SHANK3-203ENST00000445220 P0C879 139 aa14.33□□□□□ -0.12
SHANK3-203ENST00000445220 C14orf132Q9NPU4 83 aa14.33□□□□□ -0.12
SHANK3-203ENST00000445220 PTPN13Q12923 2485 aa14.33□□□□□ -0.12
SHANK3-203ENST00000445220 IGHV4-4A0A075B6R2 117 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 PDE6GP18545 87 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 RITA1Q96K30 269 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 FAM236DA0A1B0GTK5 79 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 FAM236CP0DP71 79 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 SPRY4Q9C004 299 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 MRPL36Q9P0J6 103 aaKnown RBP14.32□□□□□ -0.12
SHANK3-203ENST00000445220 IGHV7-81A0A0B4J1V7 117 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 C20orf197Q8N268 126 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 TEX22C9J3V5 150 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 C20orf203Q8NBC4 194 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 MAPK1IP1LQ8NDC0 245 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 MBD6Q96DN6 1003 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 ZGRF1Q86YA3 2104 aa14.32□□□□□ -0.12
SHANK3-203ENST00000445220 IGHV4-28A0A0C4DH34 117 aa14.31□□□□□ -0.12
SHANK3-203ENST00000445220 K7EQD1 137 aa14.31□□□□□ -0.12
SHANK3-203ENST00000445220 TRAV23DV6A0A075B6W5 121 aa14.31□□□□□ -0.12
SHANK3-203ENST00000445220 COX7A2LO14548 114 aa14.31□□□□□ -0.12
SHANK3-203ENST00000445220 LINC00322Q6ZN03 302 aaPredicted RBP14.3□□□□□ -0.12
SHANK3-203ENST00000445220 SVIPQ8NHG7 77 aa14.3□□□□□ -0.12
SHANK3-203ENST00000445220 Q9HAA7 133 aa14.3□□□□□ -0.12
SHANK3-203ENST00000445220 IGLV2-23P01705 113 aa14.3□□□□□ -0.12
SHANK3-203ENST00000445220 RMI2Q96E14 147 aa14.29□□□□□ -0.12
SHANK3-203ENST00000445220 TRBV12-3P01733 135 aa14.29□□□□□ -0.12
SHANK3-203ENST00000445220 A0A0J9YXY3 114 aa14.29□□□□□ -0.12
SHANK3-203ENST00000445220 CENPVL3A0A0U1RRI6 287 aa14.29□□□□□ -0.12
SHANK3-203ENST00000445220 ETDCA0A1B0GVM5 59 aa14.29□□□□□ -0.12
SHANK3-203ENST00000445220 MIR7-3HGQ8N6C7 128 aa14.29□□□□□ -0.12
SHANK3-203ENST00000445220 MLST8Q9BVC4 326 aa14.29□□□□□ -0.12
SHANK3-203ENST00000445220 NFE4Q86UQ8 179 aa14.28□□□□□ -0.12
SHANK3-203ENST00000445220 UPK3BQ9BT76 320 aa14.28□□□□□ -0.12
SHANK3-203ENST00000445220 MED13LQ71F56 2210 aa14.28□□□□□ -0.12
SHANK3-203ENST00000445220 SPRNQ5BIV9 151 aa14.28□□□□□ -0.12
SHANK3-203ENST00000445220 VPREB3Q9UKI3 123 aa14.28□□□□□ -0.12
SHANK3-203ENST00000445220 Q6ZQT7 251 aa14.27□□□□□ -0.12
SHANK3-203ENST00000445220 APOC4P55056 127 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 1146.1 ms