RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 NXPH4O95158 308 aa9.85□□□□□ -0.83
SSBP3-208ENST00000444533 IGLC6P0CF74 106 aa9.85□□□□□ -0.83
SSBP3-208ENST00000444533 FAM3BP58499 235 aaPredicted RBP9.85□□□□□ -0.83
SSBP3-208ENST00000444533 PNRC1Q12796 327 aaPredicted RBP9.85□□□□□ -0.83
SSBP3-208ENST00000444533 WDR73Q6P4I2 378 aa9.85□□□□□ -0.83
SSBP3-208ENST00000444533 LYZL1Q6UWQ5 148 aa9.85□□□□□ -0.83
SSBP3-208ENST00000444533 NEGR1Q7Z3B1 354 aa9.85□□□□□ -0.83
SSBP3-208ENST00000444533 OR10G8Q8NGN5 311 aa9.85□□□□□ -0.83
SSBP3-208ENST00000444533 ISOC2Q96AB3 205 aa9.85□□□□□ -0.83
SSBP3-208ENST00000444533 VSIG2Q96IQ7 327 aa9.85□□□□□ -0.83
SSBP3-208ENST00000444533 CSMD3Q7Z407 3707 aa9.84□□□□□ -0.83
SSBP3-208ENST00000444533 F5H697 171 aa9.84□□□□□ -0.83
SSBP3-208ENST00000444533 TWIST1Q15672 202 aa9.84□□□□□ -0.83
SSBP3-208ENST00000444533 ZNF56Q15929 161 aa9.84□□□□□ -0.83
SSBP3-208ENST00000444533 COMMD7Q86VX2 200 aa9.84□□□□□ -0.83
SSBP3-208ENST00000444533 ZNF575Q86XF7 245 aa9.84□□□□□ -0.83
SSBP3-208ENST00000444533 TSKUQ8WUA8 353 aa9.84□□□□□ -0.83
SSBP3-208ENST00000444533 GFRA4Q9GZZ7 299 aa9.84□□□□□ -0.83
SSBP3-208ENST00000444533 A0A096LPF7 62 aa9.83□□□□□ -0.84
SSBP3-208ENST00000444533 FAM231BA6NCW3 169 aa9.83□□□□□ -0.84
SSBP3-208ENST00000444533 K7EQD1 137 aa9.83□□□□□ -0.84
SSBP3-208ENST00000444533 CTRLP40313 264 aa9.83□□□□□ -0.84
SSBP3-208ENST00000444533 SLC25A29Q8N8R3 303 aa9.83□□□□□ -0.84
SSBP3-208ENST00000444533 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-208ENST00000444533 JPT2Q9H910 190 aa9.83□□□□□ -0.84
SSBP3-208ENST00000444533 PPP1R2P9O14990 202 aa9.82□□□□□ -0.84
SSBP3-208ENST00000444533 NTF3P20783 257 aa9.82□□□□□ -0.84
SSBP3-208ENST00000444533 RAB4BP61018 213 aa9.82□□□□□ -0.84
SSBP3-208ENST00000444533 C14orf178Q8N769 122 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-208ENST00000444533 PGLYRP4Q96LB8 373 aa9.82□□□□□ -0.84
SSBP3-208ENST00000444533 SAMD10Q9BYL1 202 aa9.82□□□□□ -0.84
SSBP3-208ENST00000444533 STARD9Q9P2P6 4700 aa9.81□□□□□ -0.84
SSBP3-208ENST00000444533 F8W036 122 aa9.81□□□□□ -0.84
SSBP3-208ENST00000444533 H7C1H1 209 aa9.81□□□□□ -0.84
SSBP3-208ENST00000444533 CRYGDP07320 174 aa9.81□□□□□ -0.84
SSBP3-208ENST00000444533 MGPP08493 103 aa9.81□□□□□ -0.84
SSBP3-208ENST00000444533 NAT8BQ9UHF3 227 aa9.81□□□□□ -0.84
SSBP3-208ENST00000444533 HIGD1CA8MV81 97 aa9.8□□□□□ -0.84
SSBP3-208ENST00000444533 MT-ND4LP03901 98 aa9.8□□□□□ -0.84
SSBP3-208ENST00000444533 RPL36AP83881 106 aaKnown RBP9.8□□□□□ -0.84
SSBP3-208ENST00000444533 RPL36ALQ969Q0 106 aaKnown RBP9.8□□□□□ -0.84
SSBP3-208ENST00000444533 DPH3P1Q9H4G8 78 aa9.8□□□□□ -0.84
SSBP3-208ENST00000444533 V9GYV3 84 aa9.8□□□□□ -0.84
SSBP3-208ENST00000444533 TRBV10-1A0A0K0K1A3 114 aa9.79□□□□□ -0.84
SSBP3-208ENST00000444533 A0A1B0GUT8 65 aa9.79□□□□□ -0.84
SSBP3-208ENST00000444533 TMEM218A2RU14 115 aa9.79□□□□□ -0.84
SSBP3-208ENST00000444533 LINC00862A6NCI5 91 aa9.79□□□□□ -0.84
SSBP3-208ENST00000444533 FOXA3P55318 350 aaPredicted RBP9.79□□□□□ -0.84
SSBP3-208ENST00000444533 RIGQ13278 110 aa9.79□□□□□ -0.84
SSBP3-208ENST00000444533 UFSP1Q6NVU6 142 aa9.79□□□□□ -0.84
SSBP3-208ENST00000444533 GTSF1Q8WW33 167 aa9.79□□□□□ -0.84
SSBP3-208ENST00000444533 CNFNQ9BYD5 112 aa9.79□□□□□ -0.84
SSBP3-208ENST00000444533 NACAE9PAV3 2078 aa9.79□□□□□ -0.84
SSBP3-208ENST00000444533 GAGE12JA6NER3 117 aa9.78□□□□□ -0.84
SSBP3-208ENST00000444533 GAGE1Q13065 139 aa9.78□□□□□ -0.84
SSBP3-208ENST00000444533 GAGE4Q13068 117 aa9.78□□□□□ -0.84
SSBP3-208ENST00000444533 GAGE5Q13069 117 aa9.78□□□□□ -0.84
SSBP3-208ENST00000444533 ESRGQ1W209 222 aa9.78□□□□□ -0.84
SSBP3-208ENST00000444533 GAGE13Q4V321 117 aa9.78□□□□□ -0.84
SSBP3-208ENST00000444533 ATP6V0E2Q8NHE4 81 aa9.78□□□□□ -0.84
SSBP3-208ENST00000444533 ANAPC16Q96DE5 110 aa9.78□□□□□ -0.84
SSBP3-208ENST00000444533 MSRB1Q9NZV6 116 aa9.78□□□□□ -0.84
SSBP3-208ENST00000444533 LINC00588Q9Y4M8 146 aa9.78□□□□□ -0.84
SSBP3-208ENST00000444533 LOC100131303A0A0U1RQF7 123 aa9.77□□□□□ -0.85
SSBP3-208ENST00000444533 EVI2AP22794 236 aa9.77□□□□□ -0.85
SSBP3-208ENST00000444533 SEC11CQ9BY50 192 aa9.77□□□□□ -0.85
SSBP3-208ENST00000444533 MRPS16Q9Y3D3 137 aaKnown RBP9.77□□□□□ -0.85
SSBP3-208ENST00000444533 S100A8P05109 93 aa9.76□□□□□ -0.85
SSBP3-208ENST00000444533 LYPD5Q6UWN5 251 aa9.76□□□□□ -0.85
SSBP3-208ENST00000444533 Q6ZSN1 163 aa9.76□□□□□ -0.85
SSBP3-208ENST00000444533 TRBV7-3A0A075B6L6 115 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 A0A087WWC5 75 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 TRAV8-6A0A0B4J262 113 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 A0A1B0GW15 77 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 SMIM27A0A1W2PRY6 76 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 NDUFA5Q16718 116 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 TTC32Q5I0X7 151 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 NUP35Q8NFH5 326 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 ZNRF2Q8NHG8 242 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 UPK3BQ9BT76 320 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 GTSF1LQ9H1H1 148 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 Q9H8V8 135 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
SSBP3-208ENST00000444533 TIRAPP58753 221 aa9.74□□□□□ -0.85
SSBP3-208ENST00000444533 OR10J3Q5JRS4 329 aa9.74□□□□□ -0.85
SSBP3-208ENST00000444533 DNAJC30Q96LL9 226 aa9.74□□□□□ -0.85
SSBP3-208ENST00000444533 KIF25-AS1Q9Y6Z4 181 aa9.74□□□□□ -0.85
SSBP3-208ENST00000444533 IGLV2-18A0A075B6J9 118 aa9.73□□□□□ -0.85
SSBP3-208ENST00000444533 TRAV9-2A0A087WT02 112 aa9.73□□□□□ -0.85
SSBP3-208ENST00000444533 SIVA1O15304 175 aa9.73□□□□□ -0.85
SSBP3-208ENST00000444533 RASL11AQ6T310 242 aa9.73□□□□□ -0.85
SSBP3-208ENST00000444533 TMEM97Q5BJF2 176 aa9.72□□□□□ -0.85
SSBP3-208ENST00000444533 LELP1Q5T871 98 aa9.72□□□□□ -0.85
SSBP3-208ENST00000444533 SUMO4Q6EEV6 95 aa9.72□□□□□ -0.85
SSBP3-208ENST00000444533 KCNIP4Q6PIL6 250 aa9.72□□□□□ -0.85
SSBP3-208ENST00000444533 FRZBQ92765 325 aa9.72□□□□□ -0.85
SSBP3-208ENST00000444533 CTDSP1Q9GZU7 261 aa9.72□□□□□ -0.85
SSBP3-208ENST00000444533 TMEM191AQ9H0A3 160 aa9.72□□□□□ -0.85
SSBP3-208ENST00000444533 DYNC2H1Q8NCM8 4307 aaKnown RBP9.72□□□□□ -0.85
SSBP3-208ENST00000444533 M0R2N4 97 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms