RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 SSBP4Q9BWG4 385 aaPredicted RBP12.68□□□□□ -0.38
CCDC188-202ENST00000444532 SNAI2O43623 268 aa12.67□□□□□ -0.38
CCDC188-202ENST00000444532 CRYGDP07320 174 aa12.67□□□□□ -0.38
CCDC188-202ENST00000444532 OR5AL1P0C617 328 aa12.67□□□□□ -0.38
CCDC188-202ENST00000444532 FAM74A4Q5TZK3 123 aa12.67□□□□□ -0.38
CCDC188-202ENST00000444532 DAZAP1Q96EP5 407 aaKnown RBP12.67□□□□□ -0.38
CCDC188-202ENST00000444532 GTSF1LQ9H1H1 148 aa12.67□□□□□ -0.38
CCDC188-202ENST00000444532 BIN3Q9NQY0 253 aa12.67□□□□□ -0.38
CCDC188-202ENST00000444532 A0A087WWL8 130 aa12.66□□□□□ -0.38
CCDC188-202ENST00000444532 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
CCDC188-202ENST00000444532 C14orf178Q8N769 122 aaPredicted RBP12.66□□□□□ -0.38
CCDC188-202ENST00000444532 IGHV3-38A0A0C4DH36 116 aa12.65□□□□□ -0.38
CCDC188-202ENST00000444532 GAGE12JA6NER3 117 aa12.65□□□□□ -0.38
CCDC188-202ENST00000444532 GAGE1Q13065 139 aa12.65□□□□□ -0.38
CCDC188-202ENST00000444532 GAGE4Q13068 117 aa12.65□□□□□ -0.38
CCDC188-202ENST00000444532 GAGE5Q13069 117 aa12.65□□□□□ -0.38
CCDC188-202ENST00000444532 GAGE13Q4V321 117 aa12.65□□□□□ -0.38
CCDC188-202ENST00000444532 LELP1Q5T871 98 aa12.65□□□□□ -0.38
CCDC188-202ENST00000444532 NFE4Q86UQ8 179 aa12.65□□□□□ -0.38
CCDC188-202ENST00000444532 OR10AG1Q8NH19 301 aa12.65□□□□□ -0.38
CCDC188-202ENST00000444532 TRBV20OR9-2A0A075B6H5 130 aa12.64□□□□□ -0.39
CCDC188-202ENST00000444532 C19orf71A6NCJ1 209 aa12.64□□□□□ -0.39
CCDC188-202ENST00000444532 LINC00694P0DN24 101 aa12.64□□□□□ -0.39
CCDC188-202ENST00000444532 RPS20P60866 119 aaKnown RBP12.64□□□□□ -0.39
CCDC188-202ENST00000444532 OR10J3Q5JRS4 329 aa12.64□□□□□ -0.39
CCDC188-202ENST00000444532 Q6ZRN7 208 aaPredicted RBP12.64□□□□□ -0.39
CCDC188-202ENST00000444532 C10orf126Q8N4M7 172 aa12.64□□□□□ -0.39
CCDC188-202ENST00000444532 RBFOX3A6NFN3 312 aa12.63□□□□□ -0.39
CCDC188-202ENST00000444532 LINC01556Q5JQF7 62 aa12.63□□□□□ -0.39
CCDC188-202ENST00000444532 SPANXN1Q5VSR9 72 aa12.63□□□□□ -0.39
CCDC188-202ENST00000444532 Q9UF83 564 aa12.63□□□□□ -0.39
CCDC188-202ENST00000444532 TRBV10-1A0A0K0K1A3 114 aa12.62□□□□□ -0.39
CCDC188-202ENST00000444532 XKRY2A2RUG3 117 aa12.62□□□□□ -0.39
CCDC188-202ENST00000444532 RAB4BP61018 213 aa12.62□□□□□ -0.39
CCDC188-202ENST00000444532 OR2D3Q8NGH3 330 aa12.62□□□□□ -0.39
CCDC188-202ENST00000444532 MSRB1Q9NZV6 116 aa12.62□□□□□ -0.39
CCDC188-202ENST00000444532 A0A087WWC5 75 aa12.61□□□□□ -0.39
CCDC188-202ENST00000444532 TMEM250H0YL14 139 aa12.61□□□□□ -0.39
CCDC188-202ENST00000444532 P01737 135 aa12.61□□□□□ -0.39
CCDC188-202ENST00000444532 TNFRSF18Q9Y5U5 241 aa12.61□□□□□ -0.39
CCDC188-202ENST00000444532 IGLC6P0CF74 106 aa12.6□□□□□ -0.39
CCDC188-202ENST00000444532 FER1L6-AS1Q8NA97 138 aa12.6□□□□□ -0.39
CCDC188-202ENST00000444532 PKHD1P08F94 4074 aa12.6□□□□□ -0.39
CCDC188-202ENST00000444532 MUC21A0A0G2JKD1 596 aa12.59□□□□□ -0.39
CCDC188-202ENST00000444532 MUC21A0A140T8X8 626 aa12.59□□□□□ -0.39
CCDC188-202ENST00000444532 GZMBP10144 247 aa12.59□□□□□ -0.39
CCDC188-202ENST00000444532 RPL36AP83881 106 aaKnown RBP12.59□□□□□ -0.39
CCDC188-202ENST00000444532 RPL36ALQ969Q0 106 aaKnown RBP12.59□□□□□ -0.39
CCDC188-202ENST00000444532 FAM210AQ96ND0 272 aa12.59□□□□□ -0.39
CCDC188-202ENST00000444532 F2Z2F3 143 aa12.58□□□□□ -0.4
CCDC188-202ENST00000444532 NDUFS6O75380 124 aaKnown RBP12.58□□□□□ -0.4
CCDC188-202ENST00000444532 SSTP61278 116 aa12.58□□□□□ -0.4
CCDC188-202ENST00000444532 ZNF56Q15929 161 aa12.58□□□□□ -0.4
CCDC188-202ENST00000444532 TOR2AQ5JU69 321 aa12.58□□□□□ -0.4
CCDC188-202ENST00000444532 OCC1Q8TAD7 63 aa12.58□□□□□ -0.4
CCDC188-202ENST00000444532 TRBV7-3A0A075B6L6 115 aa12.57□□□□□ -0.4
CCDC188-202ENST00000444532 IBA57-AS1B1ANH7 110 aa12.57□□□□□ -0.4
CCDC188-202ENST00000444532 SMIM17P0DL12 118 aa12.57□□□□□ -0.4
CCDC188-202ENST00000444532 CACNG7P62955 275 aa12.57□□□□□ -0.4
CCDC188-202ENST00000444532 NUDT10Q8NFP7 164 aa12.57□□□□□ -0.4
CCDC188-202ENST00000444532 OR10G8Q8NGN5 311 aa12.57□□□□□ -0.4
CCDC188-202ENST00000444532 NUDT11Q96G61 164 aa12.57□□□□□ -0.4
CCDC188-202ENST00000444532 AP1S3Q96PC3 154 aa12.57□□□□□ -0.4
CCDC188-202ENST00000444532 TPPP3Q9BW30 176 aa12.57□□□□□ -0.4
CCDC188-202ENST00000444532 EIF5A2Q9GZV4 153 aaKnown RBP12.57□□□□□ -0.4
CCDC188-202ENST00000444532 C16orf90A8MZG2 172 aa12.56□□□□□ -0.4
CCDC188-202ENST00000444532 IFITM2Q01629 132 aa12.56□□□□□ -0.4
CCDC188-202ENST00000444532 SPATA12Q7Z6I5 190 aa12.56□□□□□ -0.4
CCDC188-202ENST00000444532 KIF25-AS1Q9Y6Z4 181 aa12.56□□□□□ -0.4
CCDC188-202ENST00000444532 F5H697 171 aa12.55□□□□□ -0.4
CCDC188-202ENST00000444532 K7EN84 100 aa12.55□□□□□ -0.4
CCDC188-202ENST00000444532 EREGO14944 169 aa12.55□□□□□ -0.4
CCDC188-202ENST00000444532 IGHV3-30P01768 117 aa12.55□□□□□ -0.4
CCDC188-202ENST00000444532 IGHV3-33P01772 117 aa12.55□□□□□ -0.4
CCDC188-202ENST00000444532 IGHV3-30-3P0DP02 117 aa12.55□□□□□ -0.4
CCDC188-202ENST00000444532 IGHV3-30-5P0DP03 117 aa12.55□□□□□ -0.4
CCDC188-202ENST00000444532 ERVFC1-1P60608 527 aa12.55□□□□□ -0.4
CCDC188-202ENST00000444532 UBE2D3P61077 147 aa12.55□□□□□ -0.4
CCDC188-202ENST00000444532 UBE2D2P62837 147 aa12.55□□□□□ -0.4
CCDC188-202ENST00000444532 WDR73Q6P4I2 378 aa12.54□□□□□ -0.4
CCDC188-202ENST00000444532 LYZL1Q6UWQ5 148 aa12.54□□□□□ -0.4
CCDC188-202ENST00000444532 RNASE7Q9H1E1 156 aaKnown RBP12.54□□□□□ -0.4
CCDC188-202ENST00000444532 RPP21Q9H633 154 aaKnown RBP12.54□□□□□ -0.4
CCDC188-202ENST00000444532 SRP19P09132 144 aaKnown RBP12.53□□□□□ -0.4
CCDC188-202ENST00000444532 LAGE3Q14657 143 aa12.53□□□□□ -0.4
CCDC188-202ENST00000444532 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
CCDC188-202ENST00000444532 CEBPGP53567 150 aa12.52□□□□□ -0.41
CCDC188-202ENST00000444532 SRSF3P84103 164 aaKnown RBP12.52□□□□□ -0.41
CCDC188-202ENST00000444532 C9JQL5 133 aa12.51□□□□□ -0.41
CCDC188-202ENST00000444532 TRGC1P0CF51 173 aa12.51□□□□□ -0.41
CCDC188-202ENST00000444532 NTF3P20783 257 aa12.51□□□□□ -0.41
CCDC188-202ENST00000444532 CTRLP40313 264 aa12.51□□□□□ -0.41
CCDC188-202ENST00000444532 KRTAP10-2P60368 255 aa12.51□□□□□ -0.41
CCDC188-202ENST00000444532 RAB14P61106 215 aa12.51□□□□□ -0.41
CCDC188-202ENST00000444532 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.51□□□□□ -0.41
CCDC188-202ENST00000444532 PGPEP1Q9NXJ5 209 aa12.51□□□□□ -0.41
CCDC188-202ENST00000444532 DNAH11Q96DT5 4516 aa12.5□□□□□ -0.41
CCDC188-202ENST00000444532 A0A087WTM6 91 aa12.5□□□□□ -0.41
CCDC188-202ENST00000444532 FAM231DQ6ZW35 169 aa12.5□□□□□ -0.41
CCDC188-202ENST00000444532 SMIM7Q9BQ49 75 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms