RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 ELOBQ15370 118 aa13.37□□□□□ -0.27
POLR2J3-202ENST00000443430 CHCHD7Q9BUK0 85 aa13.37□□□□□ -0.27
POLR2J3-202ENST00000443430 A0A087WX48 190 aa13.36□□□□□ -0.27
POLR2J3-202ENST00000443430 IGKV3D-20A0A0C4DH25 116 aa13.36□□□□□ -0.27
POLR2J3-202ENST00000443430 G3V3Q6 166 aa13.36□□□□□ -0.27
POLR2J3-202ENST00000443430 ARPC5O15511 151 aa13.36□□□□□ -0.27
POLR2J3-202ENST00000443430 CXorf1O96002 111 aa13.36□□□□□ -0.27
POLR2J3-202ENST00000443430 SMUG1Q53HV7 270 aa13.36□□□□□ -0.27
POLR2J3-202ENST00000443430 C5orf17Q8NAS9 161 aa13.36□□□□□ -0.27
POLR2J3-202ENST00000443430 TMEM167BQ9NRX6 74 aa13.36□□□□□ -0.27
POLR2J3-202ENST00000443430 SMLR1H3BR10 107 aa13.35□□□□□ -0.27
POLR2J3-202ENST00000443430 S100A4P26447 101 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-202ENST00000443430 SUMO1P63165 101 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-202ENST00000443430 Q0VG73 95 aa13.34□□□□□ -0.27
POLR2J3-202ENST00000443430 Q6ZRU5 148 aa13.34□□□□□ -0.27
POLR2J3-202ENST00000443430 C1orf43Q9BWL3 253 aa13.34□□□□□ -0.27
POLR2J3-202ENST00000443430 K7EQM0 130 aa13.33□□□□□ -0.28
POLR2J3-202ENST00000443430 FLI1Q01543 452 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-202ENST00000443430 ZFP69Q49AA0 526 aa13.33□□□□□ -0.28
POLR2J3-202ENST00000443430 AKR1C8PQ5T2L2 129 aa13.33□□□□□ -0.28
POLR2J3-202ENST00000443430 DMRTA1Q5VZB9 504 aa13.33□□□□□ -0.28
POLR2J3-202ENST00000443430 ENHOQ6UWT2 76 aa13.33□□□□□ -0.28
POLR2J3-202ENST00000443430 PRNTQ86SH4 94 aa13.33□□□□□ -0.28
POLR2J3-202ENST00000443430 SUN5Q8TC36 379 aa13.33□□□□□ -0.28
POLR2J3-202ENST00000443430 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-202ENST00000443430 CTXND1A0A1B0GTU2 59 aa13.32□□□□□ -0.28
POLR2J3-202ENST00000443430 ZNF726P1Q15940 193 aa13.32□□□□□ -0.28
POLR2J3-202ENST00000443430 USP17L23D6RBM5 183 aa13.31□□□□□ -0.28
POLR2J3-202ENST00000443430 PANO1I0J062 215 aa13.31□□□□□ -0.28
POLR2J3-202ENST00000443430 UBE2G2P60604 165 aa13.31□□□□□ -0.28
POLR2J3-202ENST00000443430 KCNIP4Q6PIL6 250 aa13.31□□□□□ -0.28
POLR2J3-202ENST00000443430 C9orf163Q8N9P6 203 aa13.31□□□□□ -0.28
POLR2J3-202ENST00000443430 IL36BQ9NZH7 164 aa13.31□□□□□ -0.28
POLR2J3-202ENST00000443430 EPDR1Q9UM22 224 aa13.31□□□□□ -0.28
POLR2J3-202ENST00000443430 RHODO00212 210 aa13.3□□□□□ -0.28
POLR2J3-202ENST00000443430 PRSS1P07477 247 aa13.3□□□□□ -0.28
POLR2J3-202ENST00000443430 ASIPP42127 132 aa13.3□□□□□ -0.28
POLR2J3-202ENST00000443430 DGAT2L7PQ6IED9 249 aa13.3□□□□□ -0.28
POLR2J3-202ENST00000443430 CYTL1Q9NRR1 136 aa13.3□□□□□ -0.28
POLR2J3-202ENST00000443430 IFNA7P01567 189 aa13.29□□□□□ -0.28
POLR2J3-202ENST00000443430 SAPCD1Q5SSQ6 148 aa13.29□□□□□ -0.28
POLR2J3-202ENST00000443430 FAM74A4Q5TZK3 123 aa13.29□□□□□ -0.28
POLR2J3-202ENST00000443430 A0A1W2PRE2 83 aa13.28□□□□□ -0.28
POLR2J3-202ENST00000443430 TMEM262E9PQX1 116 aa13.28□□□□□ -0.28
POLR2J3-202ENST00000443430 H3BVH4 76 aa13.27□□□□□ -0.29
POLR2J3-202ENST00000443430 C15orf54Q8N8G6 183 aa13.27□□□□□ -0.29
POLR2J3-202ENST00000443430 A0A087WWL8 130 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 TRAV34A0A0B4J273 112 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 A0A0D9SG52 128 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 MAP1LC3B2A6NCE7 125 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 FABP5P3A8MUU1 101 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 HLA-DQA1P01909 254 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 CRPP02741 224 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 UBE2D3P61077 147 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 UBE2D2P62837 147 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 SDIM1Q6ZPB5 146 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 KCNRGQ8N5I3 272 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 MAP1LC3BQ9GZQ8 125 aa13.26□□□□□ -0.29
POLR2J3-202ENST00000443430 TRBV10-1A0A0K0K1A3 114 aa13.25□□□□□ -0.29
POLR2J3-202ENST00000443430 ARMS2P0C7Q2 107 aa13.25□□□□□ -0.29
POLR2J3-202ENST00000443430 MPV17L2Q567V2 206 aa13.25□□□□□ -0.29
POLR2J3-202ENST00000443430 ZC2HC1AQ96GY0 325 aa13.25□□□□□ -0.29
POLR2J3-202ENST00000443430 SFRP2Q96HF1 295 aa13.25□□□□□ -0.29
POLR2J3-202ENST00000443430 TRBV7-3A0A075B6L6 115 aa13.24□□□□□ -0.29
POLR2J3-202ENST00000443430 FAM74A7A6NL05 159 aa13.24□□□□□ -0.29
POLR2J3-202ENST00000443430 B4DEV8 164 aa13.24□□□□□ -0.29
POLR2J3-202ENST00000443430 PEX7O00628 323 aa13.24□□□□□ -0.29
POLR2J3-202ENST00000443430 RPL36AP83881 106 aaKnown RBP13.24□□□□□ -0.29
POLR2J3-202ENST00000443430 ZNF345Q14585 488 aa13.24□□□□□ -0.29
POLR2J3-202ENST00000443430 DNLZQ5SXM8 178 aa13.24□□□□□ -0.29
POLR2J3-202ENST00000443430 OR11H4Q8NGC9 324 aa13.24□□□□□ -0.29
POLR2J3-202ENST00000443430 RPL36ALQ969Q0 106 aaKnown RBP13.24□□□□□ -0.29
POLR2J3-202ENST00000443430 TRBV6-8A0A0A6YYG3 113 aa13.23□□□□□ -0.29
POLR2J3-202ENST00000443430 ANGP03950 147 aaKnown RBP13.23□□□□□ -0.29
POLR2J3-202ENST00000443430 ZNF471Q9BX82 626 aaPredicted RBP13.23□□□□□ -0.29
POLR2J3-202ENST00000443430 ARL2-SNX15V9GYD0 113 aa13.23□□□□□ -0.29
POLR2J3-202ENST00000443430 KRBOX1C9JBD0 128 aa13.22□□□□□ -0.29
POLR2J3-202ENST00000443430 FHITP49789 147 aa13.22□□□□□ -0.29
POLR2J3-202ENST00000443430 RPL19P84098 196 aaKnown RBP13.22□□□□□ -0.29
POLR2J3-202ENST00000443430 CIRBPQ14011 172 aaKnown RBP13.22□□□□□ -0.29
POLR2J3-202ENST00000443430 STOML3Q8TAV4 291 aa13.22□□□□□ -0.29
POLR2J3-202ENST00000443430 KANTRA0A1W2PQU2 76 aa13.21□□□□□ -0.29
POLR2J3-202ENST00000443430 GRIFINA4D1Z8 144 aa13.21□□□□□ -0.29
POLR2J3-202ENST00000443430 HMSDA8MTL9 139 aa13.21□□□□□ -0.29
POLR2J3-202ENST00000443430 CRIP1P50238 77 aa13.21□□□□□ -0.29
POLR2J3-202ENST00000443430 MIAQ16674 131 aa13.21□□□□□ -0.29
POLR2J3-202ENST00000443430 KRTAP26-1Q6PEX3 210 aa13.21□□□□□ -0.29
POLR2J3-202ENST00000443430 Q86TA4 180 aa13.21□□□□□ -0.29
POLR2J3-202ENST00000443430 OR10G8Q8NGN5 311 aa13.21□□□□□ -0.29
POLR2J3-202ENST00000443430 NKX6-2Q9C056 277 aaPredicted RBP13.21□□□□□ -0.29
POLR2J3-202ENST00000443430 M0R036 132 aa13.2□□□□□ -0.3
POLR2J3-202ENST00000443430 BCL2L11O43521 198 aa13.2□□□□□ -0.3
POLR2J3-202ENST00000443430 CST9LP1Q5W188 147 aa13.2□□□□□ -0.3
POLR2J3-202ENST00000443430 FAM213BQ8TBF2 198 aa13.2□□□□□ -0.3
POLR2J3-202ENST00000443430 HIST1H2BAQ96A08 127 aa13.2□□□□□ -0.3
POLR2J3-202ENST00000443430 PHLDA3Q9Y5J5 127 aa13.2□□□□□ -0.3
POLR2J3-202ENST00000443430 A0A1B0GV50 99 aa13.19□□□□□ -0.3
POLR2J3-202ENST00000443430 M0R381 172 aa13.19□□□□□ -0.3
POLR2J3-202ENST00000443430 PFDN1O60925 122 aa13.18□□□□□ -0.3
POLR2J3-202ENST00000443430 UBE2G1P62253 170 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms