RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MPV17L2Q567V2 206 aa9.14□□□□□ -0.95
HMGN1-208ENST00000443046 OR10G8Q8NGN5 311 aa9.14□□□□□ -0.95
HMGN1-208ENST00000443046 WFDC1Q9HC57 220 aa9.14□□□□□ -0.95
HMGN1-208ENST00000443046 EPDR1Q9UM22 224 aa9.14□□□□□ -0.95
HMGN1-208ENST00000443046 TRBV7-3A0A075B6L6 115 aa9.13□□□□□ -0.95
HMGN1-208ENST00000443046 TRBV6-8A0A0A6YYG3 113 aa9.13□□□□□ -0.95
HMGN1-208ENST00000443046 FABP5P3A8MUU1 101 aa9.13□□□□□ -0.95
HMGN1-208ENST00000443046 TMEM262E9PQX1 116 aa9.13□□□□□ -0.95
HMGN1-208ENST00000443046 HLA-DQA1P01909 254 aa9.13□□□□□ -0.95
HMGN1-208ENST00000443046 CRPP02741 224 aa9.13□□□□□ -0.95
HMGN1-208ENST00000443046 ARMS2P0C7Q2 107 aa9.13□□□□□ -0.95
HMGN1-208ENST00000443046 CNBPP62633 177 aaKnown RBP9.13□□□□□ -0.95
HMGN1-208ENST00000443046 CYCSP99999 105 aaKnown RBP9.13□□□□□ -0.95
HMGN1-208ENST00000443046 FAM74A4Q5TZK3 123 aa9.13□□□□□ -0.95
HMGN1-208ENST00000443046 HSD17B11Q8NBQ5 300 aa9.13□□□□□ -0.95
HMGN1-208ENST00000443046 PPP1R1CQ8WVI7 109 aa9.13□□□□□ -0.95
HMGN1-208ENST00000443046 PRR34Q9NV39 138 aa9.13□□□□□ -0.95
HMGN1-208ENST00000443046 LPAP08519 4548 aa9.12□□□□□ -0.95
HMGN1-208ENST00000443046 A0A087WWL8 130 aa9.12□□□□□ -0.95
HMGN1-208ENST00000443046 FAM240BA0A1B0GVZ2 78 aa9.12□□□□□ -0.95
HMGN1-208ENST00000443046 H3BVH4 76 aa9.12□□□□□ -0.95
HMGN1-208ENST00000443046 H2BFSP57053 126 aa9.12□□□□□ -0.95
HMGN1-208ENST00000443046 SUMO1P63165 101 aaKnown RBP9.12□□□□□ -0.95
HMGN1-208ENST00000443046 RPL36AP83881 106 aaKnown RBP9.12□□□□□ -0.95
HMGN1-208ENST00000443046 ODF1Q14990 250 aa9.12□□□□□ -0.95
HMGN1-208ENST00000443046 RPL36ALQ969Q0 106 aaKnown RBP9.12□□□□□ -0.95
HMGN1-208ENST00000443046 RNF185Q96GF1 192 aa9.12□□□□□ -0.95
HMGN1-208ENST00000443046 SMIM3Q9BZL3 60 aa9.12□□□□□ -0.95
HMGN1-208ENST00000443046 KRBOX1C9JBD0 128 aa9.11□□□□□ -0.95
HMGN1-208ENST00000443046 ANGP03950 147 aaKnown RBP9.11□□□□□ -0.95
HMGN1-208ENST00000443046 GCHFRP30047 84 aa9.11□□□□□ -0.95
HMGN1-208ENST00000443046 RPL12P30050 165 aaKnown RBP9.11□□□□□ -0.95
HMGN1-208ENST00000443046 CRIP1P50238 77 aa9.11□□□□□ -0.95
HMGN1-208ENST00000443046 CLRN3Q8NCR9 226 aa9.11□□□□□ -0.95
HMGN1-208ENST00000443046 OR11H4Q8NGC9 324 aa9.11□□□□□ -0.95
HMGN1-208ENST00000443046 A0A087WYN8 130 aa9.1□□□□□ -0.95
HMGN1-208ENST00000443046 B4DEV8 164 aa9.1□□□□□ -0.95
HMGN1-208ENST00000443046 MPC2O95563 127 aa9.1□□□□□ -0.95
HMGN1-208ENST00000443046 CDC34P49427 236 aaPredicted RBP9.1□□□□□ -0.95
HMGN1-208ENST00000443046 ARL2-SNX15V9GYD0 113 aa9.1□□□□□ -0.95
HMGN1-208ENST00000443046 COX8CQ7Z4L0 72 aa9.09□□□□□ -0.95
HMGN1-208ENST00000443046 SPACA4Q8TDM5 124 aa9.09□□□□□ -0.95
HMGN1-208ENST00000443046 RAB24Q969Q5 203 aa9.09□□□□□ -0.95
HMGN1-208ENST00000443046 CCDC32Q9BV29 185 aa9.09□□□□□ -0.95
HMGN1-208ENST00000443046 TRAV34A0A0B4J273 112 aa9.08□□□□□ -0.96
HMGN1-208ENST00000443046 SLPIP03973 132 aa9.08□□□□□ -0.96
HMGN1-208ENST00000443046 KRTAP10-8P60410 259 aa9.08□□□□□ -0.96
HMGN1-208ENST00000443046 PKIAP61925 76 aa9.08□□□□□ -0.96
HMGN1-208ENST00000443046 PRR27Q6MZM9 219 aa9.08□□□□□ -0.96
HMGN1-208ENST00000443046 NEXN-AS1Q8NBZ9 246 aa9.08□□□□□ -0.96
HMGN1-208ENST00000443046 PLAC8Q9NZF1 115 aa9.08□□□□□ -0.96
HMGN1-208ENST00000443046 GRIFINA4D1Z8 144 aa9.07□□□□□ -0.96
HMGN1-208ENST00000443046 PHOX2AO14813 284 aa9.07□□□□□ -0.96
HMGN1-208ENST00000443046 PTTG1O95997 202 aa9.07□□□□□ -0.96
HMGN1-208ENST00000443046 CHTF8P0CG12 524 aa9.07□□□□□ -0.96
HMGN1-208ENST00000443046 MZT2BQ6NZ67 158 aa9.07□□□□□ -0.96
HMGN1-208ENST00000443046 NTM-AS1Q6ZSK4 140 aa9.07□□□□□ -0.96
HMGN1-208ENST00000443046 TMEM167BQ9NRX6 74 aa9.07□□□□□ -0.96
HMGN1-208ENST00000443046 PHLDA3Q9Y5J5 127 aa9.07□□□□□ -0.96
HMGN1-208ENST00000443046 IGHV3-64A0A075B6Q5 118 aa9.06□□□□□ -0.96
HMGN1-208ENST00000443046 A0A0J9YXV3 536 aa9.06□□□□□ -0.96
HMGN1-208ENST00000443046 A0A1W2PRE2 83 aa9.06□□□□□ -0.96
HMGN1-208ENST00000443046 GAS8-AS1O95177 125 aa9.06□□□□□ -0.96
HMGN1-208ENST00000443046 PET100P0DJ07 73 aa9.06□□□□□ -0.96
HMGN1-208ENST00000443046 RAB4BP61018 213 aa9.06□□□□□ -0.96
HMGN1-208ENST00000443046 RBX1P62877 108 aa9.06□□□□□ -0.96
HMGN1-208ENST00000443046 Q86TA4 180 aa9.06□□□□□ -0.96
HMGN1-208ENST00000443046 LINC00269Q8N2A0 174 aa9.06□□□□□ -0.96
HMGN1-208ENST00000443046 CHCHD5Q9BSY4 110 aa9.06□□□□□ -0.96
HMGN1-208ENST00000443046 DPH3P1Q9H4G8 78 aa9.06□□□□□ -0.96
HMGN1-208ENST00000443046 MUC2Q02817 5179 aa9.05□□□□□ -0.96
HMGN1-208ENST00000443046 M0R036 132 aa9.05□□□□□ -0.96
HMGN1-208ENST00000443046 M0R381 172 aa9.05□□□□□ -0.96
HMGN1-208ENST00000443046 CXorf1O96002 111 aa9.05□□□□□ -0.96
HMGN1-208ENST00000443046 TPT1P13693 172 aaKnown RBP9.05□□□□□ -0.96
HMGN1-208ENST00000443046 ZFP82Q8N141 532 aa9.05□□□□□ -0.96
HMGN1-208ENST00000443046 VAX2Q9UIW0 290 aa9.05□□□□□ -0.96
HMGN1-208ENST00000443046 SH2D1AO60880 128 aa9.04□□□□□ -0.96
HMGN1-208ENST00000443046 ZNF674Q2M3X9 581 aa9.04□□□□□ -0.96
HMGN1-208ENST00000443046 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
HMGN1-208ENST00000443046 CLPSL2Q6UWE3 100 aa9.04□□□□□ -0.96
HMGN1-208ENST00000443046 DPH3Q96FX2 82 aa9.04□□□□□ -0.96
HMGN1-208ENST00000443046 PSMG3Q9BT73 122 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-208ENST00000443046 KIF25-AS1Q9Y6Z4 181 aa9.04□□□□□ -0.96
HMGN1-208ENST00000443046 hDV102S1A0JD36 115 aa9.03□□□□□ -0.96
HMGN1-208ENST00000443046 PRR3P79522 188 aaKnown RBP9.03□□□□□ -0.96
HMGN1-208ENST00000443046 FAM162BQ5T6X4 162 aa9.03□□□□□ -0.96
HMGN1-208ENST00000443046 WDR73Q6P4I2 378 aa9.03□□□□□ -0.96
HMGN1-208ENST00000443046 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
HMGN1-208ENST00000443046 PEX7O00628 323 aa9.02□□□□□ -0.97
HMGN1-208ENST00000443046 ATP6V0CP27449 155 aa9.02□□□□□ -0.97
HMGN1-208ENST00000443046 TMEM97Q5BJF2 176 aa9.02□□□□□ -0.97
HMGN1-208ENST00000443046 ZFP30Q9Y2G7 519 aa9.02□□□□□ -0.97
HMGN1-208ENST00000443046 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
HMGN1-208ENST00000443046 MBP02144 154 aa9.01□□□□□ -0.97
HMGN1-208ENST00000443046 SERF2P84101 59 aa9.01□□□□□ -0.97
HMGN1-208ENST00000443046 REG3AQ06141 175 aa9.01□□□□□ -0.97
HMGN1-208ENST00000443046 GAGE6Q13070 117 aa9.01□□□□□ -0.97
HMGN1-208ENST00000443046 IGLV10-54A0A075B6I4 117 aa9□□□□□ -0.97
HMGN1-208ENST00000443046 TMSB15BA0A087X1C1 80 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms