RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 Q6ZSN1 163 aa9.71□□□□□ -0.86
PTPRN-206ENST00000442029 TCTE3Q8IZS6 198 aa9.71□□□□□ -0.86
PTPRN-206ENST00000442029 SAMD10Q9BYL1 202 aa9.71□□□□□ -0.86
PTPRN-206ENST00000442029 A0A087WWC5 75 aa9.7□□□□□ -0.86
PTPRN-206ENST00000442029 HMSDA8MTL9 139 aa9.7□□□□□ -0.86
PTPRN-206ENST00000442029 M0R381 172 aa9.7□□□□□ -0.86
PTPRN-206ENST00000442029 BCL2L11O43521 198 aa9.7□□□□□ -0.86
PTPRN-206ENST00000442029 S100A9P06702 114 aaKnown RBP9.7□□□□□ -0.86
PTPRN-206ENST00000442029 GCSHP23434 173 aa9.7□□□□□ -0.86
PTPRN-206ENST00000442029 LAGE3Q14657 143 aa9.7□□□□□ -0.86
PTPRN-206ENST00000442029 ZFP82Q8N141 532 aa9.7□□□□□ -0.86
PTPRN-206ENST00000442029 C14orf178Q8N769 122 aaPredicted RBP9.7□□□□□ -0.86
PTPRN-206ENST00000442029 TM2D2Q9BX73 214 aa9.7□□□□□ -0.86
PTPRN-206ENST00000442029 IGLV5-52A0A0A0MRZ9 124 aa9.69□□□□□ -0.86
PTPRN-206ENST00000442029 A0A1B0GVG6 124 aa9.69□□□□□ -0.86
PTPRN-206ENST00000442029 EPM2AB3EWF7 344 aa9.69□□□□□ -0.86
PTPRN-206ENST00000442029 TOR2AQ5JU69 321 aa9.69□□□□□ -0.86
PTPRN-206ENST00000442029 UFSP1Q6NVU6 142 aa9.69□□□□□ -0.86
PTPRN-206ENST00000442029 MBD3L1Q8WWY6 194 aa9.69□□□□□ -0.86
PTPRN-206ENST00000442029 SFRP2Q96HF1 295 aa9.69□□□□□ -0.86
PTPRN-206ENST00000442029 URGCP-MRPS24S4R325 110 aa9.69□□□□□ -0.86
PTPRN-206ENST00000442029 A0A087WWL8 130 aa9.68□□□□□ -0.86
PTPRN-206ENST00000442029 H2AFB1P0C5Y9 115 aa9.68□□□□□ -0.86
PTPRN-206ENST00000442029 LINC00694P0DN24 101 aa9.68□□□□□ -0.86
PTPRN-206ENST00000442029 KRTAP10-1P60331 282 aa9.68□□□□□ -0.86
PTPRN-206ENST00000442029 NTN5Q8WTR8 489 aaPredicted RBP9.68□□□□□ -0.86
PTPRN-206ENST00000442029 TRAV8-3A0A0A6YYJ7 113 aa9.67□□□□□ -0.86
PTPRN-206ENST00000442029 SCO2A0A1W2PP80 73 aa9.67□□□□□ -0.86
PTPRN-206ENST00000442029 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
PTPRN-206ENST00000442029 C1QBP02746 253 aa9.66□□□□□ -0.86
PTPRN-206ENST00000442029 RPL36AP83881 106 aaKnown RBP9.66□□□□□ -0.86
PTPRN-206ENST00000442029 KCNIP4Q6PIL6 250 aa9.66□□□□□ -0.86
PTPRN-206ENST00000442029 BAGE2Q86Y30 109 aa9.66□□□□□ -0.86
PTPRN-206ENST00000442029 Q8N814 137 aa9.66□□□□□ -0.86
PTPRN-206ENST00000442029 FRZBQ92765 325 aa9.66□□□□□ -0.86
PTPRN-206ENST00000442029 RPL36ALQ969Q0 106 aaKnown RBP9.66□□□□□ -0.86
PTPRN-206ENST00000442029 TRBV10-1A0A0K0K1A3 114 aa9.65□□□□□ -0.86
PTPRN-206ENST00000442029 XGP55808 180 aa9.65□□□□□ -0.86
PTPRN-206ENST00000442029 PRR27Q6MZM9 219 aa9.65□□□□□ -0.86
PTPRN-206ENST00000442029 TMUB2Q71RG4 321 aa9.65□□□□□ -0.86
PTPRN-206ENST00000442029 Q8N3U1 123 aa9.65□□□□□ -0.86
PTPRN-206ENST00000442029 Q9UF83 564 aa9.65□□□□□ -0.86
PTPRN-206ENST00000442029 RPL19P84098 196 aaKnown RBP9.64□□□□□ -0.87
PTPRN-206ENST00000442029 ZNF56Q15929 161 aa9.64□□□□□ -0.87
PTPRN-206ENST00000442029 DAZ4Q86SG3 579 aaKnown RBP9.64□□□□□ -0.87
PTPRN-206ENST00000442029 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.64□□□□□ -0.87
PTPRN-206ENST00000442029 RMI2Q96E14 147 aa9.64□□□□□ -0.87
PTPRN-206ENST00000442029 MANBALQ9NQG1 85 aa9.64□□□□□ -0.87
PTPRN-206ENST00000442029 DAZ3Q9NR90 486 aaKnown RBP9.64□□□□□ -0.87
PTPRN-206ENST00000442029 A0A087WX48 190 aa9.63□□□□□ -0.87
PTPRN-206ENST00000442029 TEX46H3BTG2 121 aa9.63□□□□□ -0.87
PTPRN-206ENST00000442029 CXCL1P09341 107 aa9.63□□□□□ -0.87
PTPRN-206ENST00000442029 SPANXN1Q5VSR9 72 aa9.63□□□□□ -0.87
PTPRN-206ENST00000442029 EIF5AL1Q6IS14 154 aaKnown RBP9.63□□□□□ -0.87
PTPRN-206ENST00000442029 COX11Q9Y6N1 276 aa9.63□□□□□ -0.87
PTPRN-206ENST00000442029 TRBV7-3A0A075B6L6 115 aa9.62□□□□□ -0.87
PTPRN-206ENST00000442029 RAB4BP61018 213 aa9.62□□□□□ -0.87
PTPRN-206ENST00000442029 NIT1Q86X76 327 aa9.62□□□□□ -0.87
PTPRN-206ENST00000442029 OR10AG1Q8NH19 301 aa9.62□□□□□ -0.87
PTPRN-206ENST00000442029 TMEM70Q9BUB7 260 aa9.62□□□□□ -0.87
PTPRN-206ENST00000442029 GNG13Q9P2W3 67 aa9.62□□□□□ -0.87
PTPRN-206ENST00000442029 SMIM17P0DL12 118 aa9.61□□□□□ -0.87
PTPRN-206ENST00000442029 RPL35P42766 123 aaKnown RBP9.61□□□□□ -0.87
PTPRN-206ENST00000442029 RAB5CP51148 216 aa9.61□□□□□ -0.87
PTPRN-206ENST00000442029 UBE2D3P61077 147 aa9.61□□□□□ -0.87
PTPRN-206ENST00000442029 UBE2D2P62837 147 aa9.61□□□□□ -0.87
PTPRN-206ENST00000442029 ELOBQ15370 118 aa9.61□□□□□ -0.87
PTPRN-206ENST00000442029 Q5VSD8 79 aa9.61□□□□□ -0.87
PTPRN-206ENST00000442029 MLST8Q9BVC4 326 aa9.61□□□□□ -0.87
PTPRN-206ENST00000442029 IGKV2D-24A0A075B6R9 120 aa9.6□□□□□ -0.87
PTPRN-206ENST00000442029 F5H697 171 aa9.6□□□□□ -0.87
PTPRN-206ENST00000442029 SNAI2O43623 268 aa9.6□□□□□ -0.87
PTPRN-206ENST00000442029 SSTP61278 116 aa9.6□□□□□ -0.87
PTPRN-206ENST00000442029 DAZAP1Q96EP5 407 aaKnown RBP9.6□□□□□ -0.87
PTPRN-206ENST00000442029 CHCHD7Q9BUK0 85 aa9.6□□□□□ -0.87
PTPRN-206ENST00000442029 KLK12Q9UKR0 248 aa9.6□□□□□ -0.87
PTPRN-206ENST00000442029 MUC21A0A0G2JKD1 596 aa9.59□□□□□ -0.87
PTPRN-206ENST00000442029 MUC21A0A140T8X8 626 aa9.59□□□□□ -0.87
PTPRN-206ENST00000442029 TMEM262E9PQX1 116 aa9.59□□□□□ -0.87
PTPRN-206ENST00000442029 LECT2O14960 151 aa9.59□□□□□ -0.87
PTPRN-206ENST00000442029 SMR3BP02814 79 aaPredicted RBP9.59□□□□□ -0.87
PTPRN-206ENST00000442029 OR5AL1P0C617 328 aa9.59□□□□□ -0.87
PTPRN-206ENST00000442029 INAFM2P0DMQ5 153 aa9.59□□□□□ -0.87
PTPRN-206ENST00000442029 OR10G8Q8NGN5 311 aa9.59□□□□□ -0.87
PTPRN-206ENST00000442029 UBE2WQ96B02 151 aa9.59□□□□□ -0.87
PTPRN-206ENST00000442029 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.58□□□□□ -0.88
PTPRN-206ENST00000442029 TRAV1-1A0A0B4J248 108 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 FAM229AH3BQW9 127 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 IFNA1P01562 189 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 CCL20P78556 96 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 HAMPP81172 84 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 WFDC2Q14508 124 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 CENPWQ5EE01 88 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 NEXN-AS1Q8NBZ9 246 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 BAALCQ8WXS3 180 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 C11orf52Q96A22 123 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 AP1S3Q96PC3 154 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 DERL1Q9BUN8 251 aa9.58□□□□□ -0.88
PTPRN-206ENST00000442029 SSBP4Q9BWG4 385 aaPredicted RBP9.58□□□□□ -0.88
PTPRN-206ENST00000442029 RBFOX3A6NFN3 312 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms