RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 IGHV3-30-5P0DP03 117 aa9.03□□□□□ -0.96
LTBR-203ENST00000441074 C1orf122Q6ZSJ8 110 aa9.03□□□□□ -0.96
LTBR-203ENST00000441074 MRPL53Q96EL3 112 aaKnown RBP9.03□□□□□ -0.96
LTBR-203ENST00000441074 IGHV3OR16-8A0A075B7F1 116 aa9.02□□□□□ -0.97
LTBR-203ENST00000441074 GAGE2BQ13066 116 aa9.02□□□□□ -0.97
LTBR-203ENST00000441074 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
LTBR-203ENST00000441074 C9orf47Q6ZRZ4 202 aa9.02□□□□□ -0.97
LTBR-203ENST00000441074 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
LTBR-203ENST00000441074 PRO1854Q9UHT4 67 aa9.02□□□□□ -0.97
LTBR-203ENST00000441074 SLC25A20O43772 301 aa9.02□□□□□ -0.97
LTBR-203ENST00000441074 NDUFV3P56181 108 aaKnown RBP9.02□□□□□ -0.97
LTBR-203ENST00000441074 SLC25A29Q8N8R3 303 aa9.02□□□□□ -0.97
LTBR-203ENST00000441074 TRAV8-2A0A0B4J237 113 aa9.01□□□□□ -0.97
LTBR-203ENST00000441074 RNF223E7ERA6 249 aa9.01□□□□□ -0.97
LTBR-203ENST00000441074 M0R381 172 aa9.01□□□□□ -0.97
LTBR-203ENST00000441074 CRYGDP07320 174 aa9.01□□□□□ -0.97
LTBR-203ENST00000441074 KLK9Q2XQG4 91 aa9.01□□□□□ -0.97
LTBR-203ENST00000441074 VMO1Q7Z5L0 202 aa9.01□□□□□ -0.97
LTBR-203ENST00000441074 DPH3P1Q9H4G8 78 aa9.01□□□□□ -0.97
LTBR-203ENST00000441074 ZFAND3Q9H8U3 227 aa9.01□□□□□ -0.97
LTBR-203ENST00000441074 KLK9Q9UKQ9 250 aa9.01□□□□□ -0.97
LTBR-203ENST00000441074 IGHV3-35A0A0C4DH35 117 aa9□□□□□ -0.97
LTBR-203ENST00000441074 GAGE12JA6NER3 117 aa9□□□□□ -0.97
LTBR-203ENST00000441074 C11orf86A6NJI1 115 aa9□□□□□ -0.97
LTBR-203ENST00000441074 SNCGO76070 127 aa9□□□□□ -0.97
LTBR-203ENST00000441074 GAGE7O76087 117 aa9□□□□□ -0.97
LTBR-203ENST00000441074 GAGE12FP0CL80 117 aa9□□□□□ -0.97
LTBR-203ENST00000441074 GAGE12GP0CL81 117 aa9□□□□□ -0.97
LTBR-203ENST00000441074 GAGE12IP0CL82 117 aa9□□□□□ -0.97
LTBR-203ENST00000441074 GAGE4Q13068 117 aa9□□□□□ -0.97
LTBR-203ENST00000441074 CFAP161Q6P656 301 aa9□□□□□ -0.97
LTBR-203ENST00000441074 Q6ZQT7 251 aa9□□□□□ -0.97
LTBR-203ENST00000441074 RPL39LQ96EH5 51 aaKnown RBP9□□□□□ -0.97
LTBR-203ENST00000441074 CCL19Q99731 98 aa9□□□□□ -0.97
LTBR-203ENST00000441074 IGLV4-69A0A075B6H9 119 aa9□□□□□ -0.97
LTBR-203ENST00000441074 TGFAP01135 160 aa9□□□□□ -0.97
LTBR-203ENST00000441074 Q6Q795 121 aa9□□□□□ -0.97
LTBR-203ENST00000441074 Q6ZS46 218 aa9□□□□□ -0.97
LTBR-203ENST00000441074 FAM110DQ8TAY7 271 aaPredicted RBP9□□□□□ -0.97
LTBR-203ENST00000441074 NOTCH2Q04721 2471 aa9□□□□□ -0.97
LTBR-203ENST00000441074 NAV2Q8IVL1 2488 aa8.99□□□□□ -0.97
LTBR-203ENST00000441074 SETXQ7Z333 2677 aaKnown RBP8.99□□□□□ -0.97
LTBR-203ENST00000441074 IGHV7-81A0A0B4J1V7 117 aa8.99□□□□□ -0.97
LTBR-203ENST00000441074 IGHV1-69DA0A0B4J2H0 117 aa8.99□□□□□ -0.97
LTBR-203ENST00000441074 C9JAW5 83 aa8.99□□□□□ -0.97
LTBR-203ENST00000441074 PPP1R17O96001 155 aa8.99□□□□□ -0.97
LTBR-203ENST00000441074 KRTAP10-9P60411 292 aa8.99□□□□□ -0.97
LTBR-203ENST00000441074 IGHV3OR16-10A0A075B7F0 116 aa8.99□□□□□ -0.97
LTBR-203ENST00000441074 LMO4P61968 165 aa8.99□□□□□ -0.97
LTBR-203ENST00000441074 TRAV4A0A0B4J268 109 aa8.98□□□□□ -0.97
LTBR-203ENST00000441074 IFITM1P13164 125 aa8.98□□□□□ -0.97
LTBR-203ENST00000441074 TTC32Q5I0X7 151 aa8.98□□□□□ -0.97
LTBR-203ENST00000441074 FAM110AQ9BQ89 295 aa8.98□□□□□ -0.97
LTBR-203ENST00000441074 LENEPQ9Y5L5 61 aa8.98□□□□□ -0.97
LTBR-203ENST00000441074 TRBV7-9A0A0J9YWB2 115 aa8.98□□□□□ -0.97
LTBR-203ENST00000441074 CLPSL1A2RUU4 121 aa8.98□□□□□ -0.97
LTBR-203ENST00000441074 DUSP14O95147 198 aaKnown RBP8.98□□□□□ -0.97
LTBR-203ENST00000441074 TSHBP01222 138 aa8.98□□□□□ -0.97
LTBR-203ENST00000441074 PMVKQ15126 192 aa8.98□□□□□ -0.97
LTBR-203ENST00000441074 C14orf178Q8N769 122 aaPredicted RBP8.98□□□□□ -0.97
LTBR-203ENST00000441074 LINC01600Q96MT4 127 aa8.98□□□□□ -0.97
LTBR-203ENST00000441074 IGHV4-61A0A0C4DH41 118 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 IGHV3-66A0A0C4DH42 116 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 IGHV3-33P01772 117 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 P0DMU3 169 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 FAM231AP0DMU4 169 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 FAM231CP0DMU5 169 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 CRIP2P52943 208 aaPredicted RBP8.97□□□□□ -0.97
LTBR-203ENST00000441074 ATP5J2P56134 94 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 C15orf32Q32M92 178 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 PRR9Q5T870 116 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 Q8N9W7 124 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 SPANXA1Q9NS26 97 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 IGIPA6NJ69 53 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 CCDC179H3BU77 68 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 CRLF1O75462 422 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 TSPEAR-AS2P59090 65 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 RPL32P62910 135 aaKnown RBP8.97□□□□□ -0.97
LTBR-203ENST00000441074 TRPT1Q86TN4 253 aaKnown RBP8.97□□□□□ -0.97
LTBR-203ENST00000441074 GPHB5Q86YW7 130 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 Q8N1Y9 231 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 MAPK1IP1LQ8NDC0 245 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 AMELXQ99217 191 aa8.97□□□□□ -0.97
LTBR-203ENST00000441074 IGHV4-30-2A0A087WSY4 118 aa8.96□□□□□ -0.97
LTBR-203ENST00000441074 CLEC3BP05452 202 aa8.96□□□□□ -0.97
LTBR-203ENST00000441074 MGPP08493 103 aa8.96□□□□□ -0.97
LTBR-203ENST00000441074 TMEM263Q8WUH6 116 aaKnown RBP8.96□□□□□ -0.97
LTBR-203ENST00000441074 TMEM141Q96I45 108 aa8.96□□□□□ -0.97
LTBR-203ENST00000441074 ANKRD17O75179 2603 aaKnown RBP8.96□□□□□ -0.98
LTBR-203ENST00000441074 MED14OSP0DP75 135 aa8.96□□□□□ -0.98
LTBR-203ENST00000441074 EMP1P54849 157 aa8.96□□□□□ -0.98
LTBR-203ENST00000441074 POM121L12Q8N7R1 296 aa8.96□□□□□ -0.98
LTBR-203ENST00000441074 RAX2Q96IS3 184 aa8.96□□□□□ -0.98
LTBR-203ENST00000441074 PHLDA3Q9Y5J5 127 aa8.96□□□□□ -0.98
LTBR-203ENST00000441074 ABCA2Q9BZC7 2435 aa8.95□□□□□ -0.98
LTBR-203ENST00000441074 A0A0B4J2C4 111 aa8.95□□□□□ -0.98
LTBR-203ENST00000441074 A4D1N5 150 aa8.95□□□□□ -0.98
LTBR-203ENST00000441074 J3QQQ9 107 aa8.95□□□□□ -0.98
LTBR-203ENST00000441074 S100A4P26447 101 aaKnown RBP8.95□□□□□ -0.98
LTBR-203ENST00000441074 RPL13AP40429 203 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms