RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 OR11H4Q8NGC9 324 aa9.14□□□□□ -0.95
PTPRN-205ENST00000440552 SFRP2Q96HF1 295 aa9.14□□□□□ -0.95
PTPRN-205ENST00000440552 PSMG3Q9BT73 122 aaPredicted RBP9.14□□□□□ -0.95
PTPRN-205ENST00000440552 A0A1W2PRE2 83 aa9.13□□□□□ -0.95
PTPRN-205ENST00000440552 B4DEV8 164 aa9.13□□□□□ -0.95
PTPRN-205ENST00000440552 CXorf1O96002 111 aa9.13□□□□□ -0.95
PTPRN-205ENST00000440552 MBP02144 154 aa9.13□□□□□ -0.95
PTPRN-205ENST00000440552 ARMS2P0C7Q2 107 aa9.13□□□□□ -0.95
PTPRN-205ENST00000440552 RPL36AP83881 106 aaKnown RBP9.13□□□□□ -0.95
PTPRN-205ENST00000440552 ENHOQ6UWT2 76 aa9.13□□□□□ -0.95
PTPRN-205ENST00000440552 C9orf163Q8N9P6 203 aa9.13□□□□□ -0.95
PTPRN-205ENST00000440552 S100ZQ8WXG8 99 aa9.13□□□□□ -0.95
PTPRN-205ENST00000440552 RPL36ALQ969Q0 106 aaKnown RBP9.13□□□□□ -0.95
PTPRN-205ENST00000440552 MARVELD1Q9BSK0 173 aa9.13□□□□□ -0.95
PTPRN-205ENST00000440552 ARL2-SNX15V9GYD0 113 aa9.13□□□□□ -0.95
PTPRN-205ENST00000440552 TRBV7-3A0A075B6L6 115 aa9.12□□□□□ -0.95
PTPRN-205ENST00000440552 KRBOX1C9JBD0 128 aa9.12□□□□□ -0.95
PTPRN-205ENST00000440552 USP17L23D6RBM5 183 aa9.12□□□□□ -0.95
PTPRN-205ENST00000440552 FAM74A4Q5TZK3 123 aa9.12□□□□□ -0.95
PTPRN-205ENST00000440552 Q6ZRU5 148 aa9.12□□□□□ -0.95
PTPRN-205ENST00000440552 COX8CQ7Z4L0 72 aa9.12□□□□□ -0.95
PTPRN-205ENST00000440552 OR10G8Q8NGN5 311 aa9.12□□□□□ -0.95
PTPRN-205ENST00000440552 TNXBP22105 4242 aa9.11□□□□□ -0.95
PTPRN-205ENST00000440552 A0A087WWL8 130 aa9.11□□□□□ -0.95
PTPRN-205ENST00000440552 TRBV6-8A0A0A6YYG3 113 aa9.11□□□□□ -0.95
PTPRN-205ENST00000440552 TRAV34A0A0B4J273 112 aa9.11□□□□□ -0.95
PTPRN-205ENST00000440552 TMEM262E9PQX1 116 aa9.11□□□□□ -0.95
PTPRN-205ENST00000440552 SSNA1O43805 119 aa9.11□□□□□ -0.95
PTPRN-205ENST00000440552 UPK1BO75841 260 aa9.11□□□□□ -0.95
PTPRN-205ENST00000440552 CRPP02741 224 aa9.11□□□□□ -0.95
PTPRN-205ENST00000440552 SERF2P84101 59 aa9.11□□□□□ -0.95
PTPRN-205ENST00000440552 PHLDA3Q9Y5J5 127 aa9.11□□□□□ -0.95
PTPRN-205ENST00000440552 LRP2P98164 4655 aa9.1□□□□□ -0.95
PTPRN-205ENST00000440552 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
PTPRN-205ENST00000440552 PRSS1P07477 247 aa9.1□□□□□ -0.95
PTPRN-205ENST00000440552 ATP6V0CP27449 155 aa9.1□□□□□ -0.95
PTPRN-205ENST00000440552 CRIP1P50238 77 aa9.1□□□□□ -0.95
PTPRN-205ENST00000440552 PKIAP61925 76 aa9.1□□□□□ -0.95
PTPRN-205ENST00000440552 MIAQ16674 131 aa9.1□□□□□ -0.95
PTPRN-205ENST00000440552 Q86TA4 180 aa9.1□□□□□ -0.95
PTPRN-205ENST00000440552 C15orf54Q8N8G6 183 aa9.1□□□□□ -0.95
PTPRN-205ENST00000440552 HSD17B11Q8NBQ5 300 aa9.1□□□□□ -0.95
PTPRN-205ENST00000440552 ACTR3CQ9C0K3 210 aaPredicted RBP9.1□□□□□ -0.95
PTPRN-205ENST00000440552 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.1□□□□□ -0.95
PTPRN-205ENST00000440552 TPT1P13693 172 aaKnown RBP9.09□□□□□ -0.95
PTPRN-205ENST00000440552 RPL19P84098 196 aaKnown RBP9.09□□□□□ -0.95
PTPRN-205ENST00000440552 MPV17L2Q567V2 206 aa9.09□□□□□ -0.95
PTPRN-205ENST00000440552 SDIM1Q6ZPB5 146 aa9.09□□□□□ -0.95
PTPRN-205ENST00000440552 ZFP82Q8N141 532 aa9.09□□□□□ -0.95
PTPRN-205ENST00000440552 ZC2HC1AQ96GY0 325 aa9.09□□□□□ -0.95
PTPRN-205ENST00000440552 TNFSF18Q9UNG2 199 aa9.09□□□□□ -0.95
PTPRN-205ENST00000440552 ZFP30Q9Y2G7 519 aa9.09□□□□□ -0.95
PTPRN-205ENST00000440552 A0A0D9SG52 128 aa9.08□□□□□ -0.96
PTPRN-205ENST00000440552 GRIFINA4D1Z8 144 aa9.08□□□□□ -0.96
PTPRN-205ENST00000440552 M0R036 132 aa9.08□□□□□ -0.96
PTPRN-205ENST00000440552 PEX7O00628 323 aa9.08□□□□□ -0.96
PTPRN-205ENST00000440552 SH2D1AO60880 128 aa9.08□□□□□ -0.96
PTPRN-205ENST00000440552 IFNA7P01567 189 aa9.08□□□□□ -0.96
PTPRN-205ENST00000440552 FAM162BQ5T6X4 162 aa9.08□□□□□ -0.96
PTPRN-205ENST00000440552 HIST1H2BAQ96A08 127 aa9.08□□□□□ -0.96
PTPRN-205ENST00000440552 PANO1I0J062 215 aa9.07□□□□□ -0.96
PTPRN-205ENST00000440552 M0R381 172 aa9.07□□□□□ -0.96
PTPRN-205ENST00000440552 HLA-DQA1P01909 254 aa9.07□□□□□ -0.96
PTPRN-205ENST00000440552 ANGP03950 147 aaKnown RBP9.07□□□□□ -0.96
PTPRN-205ENST00000440552 RAB4BP61018 213 aa9.07□□□□□ -0.96
PTPRN-205ENST00000440552 IFITM3Q01628 133 aa9.07□□□□□ -0.96
PTPRN-205ENST00000440552 CIRBPQ14011 172 aaKnown RBP9.07□□□□□ -0.96
PTPRN-205ENST00000440552 LINC01559Q495D7 138 aa9.07□□□□□ -0.96
PTPRN-205ENST00000440552 PRR27Q6MZM9 219 aa9.07□□□□□ -0.96
PTPRN-205ENST00000440552 NKX6-2Q9C056 277 aaPredicted RBP9.07□□□□□ -0.96
PTPRN-205ENST00000440552 PRR34Q9NV39 138 aa9.07□□□□□ -0.96
PTPRN-205ENST00000440552 ZNF674Q2M3X9 581 aa9.06□□□□□ -0.96
PTPRN-205ENST00000440552 KRTAP26-1Q6PEX3 210 aa9.06□□□□□ -0.96
PTPRN-205ENST00000440552 CLRN3Q8NCR9 226 aa9.06□□□□□ -0.96
PTPRN-205ENST00000440552 AQP10Q96PS8 301 aa9.06□□□□□ -0.96
PTPRN-205ENST00000440552 PTTG1O95997 202 aa9.05□□□□□ -0.96
PTPRN-205ENST00000440552 TMEM97Q5BJF2 176 aa9.05□□□□□ -0.96
PTPRN-205ENST00000440552 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.05□□□□□ -0.96
PTPRN-205ENST00000440552 NEXN-AS1Q8NBZ9 246 aa9.05□□□□□ -0.96
PTPRN-205ENST00000440552 CHCHD5Q9BSY4 110 aa9.05□□□□□ -0.96
PTPRN-205ENST00000440552 TRBV6-1A0A0K0K1D8 114 aa9.04□□□□□ -0.96
PTPRN-205ENST00000440552 FAM74A7A6NL05 159 aa9.04□□□□□ -0.96
PTPRN-205ENST00000440552 CNBPP62633 177 aaKnown RBP9.04□□□□□ -0.96
PTPRN-205ENST00000440552 RNF185Q96GF1 192 aa9.04□□□□□ -0.96
PTPRN-205ENST00000440552 FMC1Q96HJ9 113 aa9.04□□□□□ -0.96
PTPRN-205ENST00000440552 VAX2Q9UIW0 290 aa9.04□□□□□ -0.96
PTPRN-205ENST00000440552 TMSB15BA0A087X1C1 80 aa9.03□□□□□ -0.96
PTPRN-205ENST00000440552 CTXND1A0A1B0GTU2 59 aa9.03□□□□□ -0.96
PTPRN-205ENST00000440552 UBE2G2P60604 165 aa9.03□□□□□ -0.96
PTPRN-205ENST00000440552 RBX1P62877 108 aa9.03□□□□□ -0.96
PTPRN-205ENST00000440552 ZNF726P1Q15940 193 aa9.03□□□□□ -0.96
PTPRN-205ENST00000440552 NTM-AS1Q6ZSK4 140 aa9.02□□□□□ -0.97
PTPRN-205ENST00000440552 TCEAL7Q9BRU2 100 aa9.02□□□□□ -0.97
PTPRN-205ENST00000440552 LTAP01374 205 aa9.01□□□□□ -0.97
PTPRN-205ENST00000440552 CXCL1P09341 107 aa9.01□□□□□ -0.97
PTPRN-205ENST00000440552 UBE2G1P62253 170 aa9.01□□□□□ -0.97
PTPRN-205ENST00000440552 ZNF56Q15929 161 aa9.01□□□□□ -0.97
PTPRN-205ENST00000440552 LINC00269Q8N2A0 174 aa9.01□□□□□ -0.97
PTPRN-205ENST00000440552 DEFA1P59665 94 aa9□□□□□ -0.97
PTPRN-205ENST00000440552 DEFA3P59666 94 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms