RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 S100A9P06702 114 aaKnown RBP13.44□□□□□ -0.26
SHROOM1-204ENST00000440118 CRIP1P50238 77 aa13.44□□□□□ -0.26
SHROOM1-204ENST00000440118 GAGE1Q13065 139 aa13.44□□□□□ -0.26
SHROOM1-204ENST00000440118 GAGE4Q13068 117 aa13.44□□□□□ -0.26
SHROOM1-204ENST00000440118 GAGE5Q13069 117 aa13.44□□□□□ -0.26
SHROOM1-204ENST00000440118 GAGE13Q4V321 117 aa13.44□□□□□ -0.26
SHROOM1-204ENST00000440118 LINC01556Q5JQF7 62 aa13.44□□□□□ -0.26
SHROOM1-204ENST00000440118 LELP1Q5T871 98 aa13.44□□□□□ -0.26
SHROOM1-204ENST00000440118 MBD3L1Q8WWY6 194 aa13.44□□□□□ -0.26
SHROOM1-204ENST00000440118 SCO2A0A1W2PP80 73 aa13.43□□□□□ -0.26
SHROOM1-204ENST00000440118 IGHV3-30P01768 117 aa13.43□□□□□ -0.26
SHROOM1-204ENST00000440118 IGHV3-33P01772 117 aa13.43□□□□□ -0.26
SHROOM1-204ENST00000440118 IGHV3-30-3P0DP02 117 aa13.43□□□□□ -0.26
SHROOM1-204ENST00000440118 IGHV3-30-5P0DP03 117 aa13.43□□□□□ -0.26
SHROOM1-204ENST00000440118 ZNF674Q2M3X9 581 aa13.43□□□□□ -0.26
SHROOM1-204ENST00000440118 LINC01559Q495D7 138 aa13.43□□□□□ -0.26
SHROOM1-204ENST00000440118 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
SHROOM1-204ENST00000440118 COX8CQ7Z4L0 72 aa13.43□□□□□ -0.26
SHROOM1-204ENST00000440118 A0A087WTM6 91 aa13.42□□□□□ -0.26
SHROOM1-204ENST00000440118 CDPF1Q6NVV7 123 aa13.42□□□□□ -0.26
SHROOM1-204ENST00000440118 ZFP82Q8N141 532 aa13.42□□□□□ -0.26
SHROOM1-204ENST00000440118 JPT2Q9H910 190 aa13.42□□□□□ -0.26
SHROOM1-204ENST00000440118 Q9HAA7 133 aa13.42□□□□□ -0.26
SHROOM1-204ENST00000440118 PGPEP1Q9NXJ5 209 aa13.42□□□□□ -0.26
SHROOM1-204ENST00000440118 DNLZQ5SXM8 178 aa13.41□□□□□ -0.26
SHROOM1-204ENST00000440118 Q6ZSN1 163 aa13.41□□□□□ -0.26
SHROOM1-204ENST00000440118 SAMD10Q9BYL1 202 aa13.41□□□□□ -0.26
SHROOM1-204ENST00000440118 LRP1BQ9NZR2 4599 aa13.41□□□□□ -0.26
SHROOM1-204ENST00000440118 A0A087WWL8 130 aa13.4□□□□□ -0.26
SHROOM1-204ENST00000440118 FUSP35637 526 aaKnown RBP eCLIP13.4□□□□□ -0.26
SHROOM1-204ENST00000440118 SMDT1Q9H4I9 107 aa13.4□□□□□ -0.26
SHROOM1-204ENST00000440118 HSPG2P98160 4391 aa13.4□□□□□ -0.26
SHROOM1-204ENST00000440118 ABCA13Q86UQ4 5058 aa13.4□□□□□ -0.26
SHROOM1-204ENST00000440118 PRR27Q6MZM9 219 aa13.39□□□□□ -0.27
SHROOM1-204ENST00000440118 BAGE2Q86Y30 109 aa13.39□□□□□ -0.27
SHROOM1-204ENST00000440118 C14orf178Q8N769 122 aaPredicted RBP13.39□□□□□ -0.27
SHROOM1-204ENST00000440118 MANBALQ9NQG1 85 aa13.39□□□□□ -0.27
SHROOM1-204ENST00000440118 GNG13Q9P2W3 67 aa13.39□□□□□ -0.27
SHROOM1-204ENST00000440118 IBA57-AS1B1ANH7 110 aa13.37□□□□□ -0.27
SHROOM1-204ENST00000440118 PEA15Q15121 130 aa13.37□□□□□ -0.27
SHROOM1-204ENST00000440118 SFRP2Q96HF1 295 aa13.37□□□□□ -0.27
SHROOM1-204ENST00000440118 URGCP-MRPS24S4R325 110 aa13.37□□□□□ -0.27
SHROOM1-204ENST00000440118 A0A087WWC5 75 aa13.36□□□□□ -0.27
SHROOM1-204ENST00000440118 RPL19P84098 196 aaKnown RBP13.36□□□□□ -0.27
SHROOM1-204ENST00000440118 UFSP1Q6NVU6 142 aa13.36□□□□□ -0.27
SHROOM1-204ENST00000440118 SCRT2Q9NQ03 307 aa13.36□□□□□ -0.27
SHROOM1-204ENST00000440118 LINC00694P0DN24 101 aa13.35□□□□□ -0.27
SHROOM1-204ENST00000440118 LYPD6BQ8NI32 183 aa13.35□□□□□ -0.27
SHROOM1-204ENST00000440118 RPL35P42766 123 aaKnown RBP13.34□□□□□ -0.27
SHROOM1-204ENST00000440118 LAGE3Q14657 143 aa13.34□□□□□ -0.27
SHROOM1-204ENST00000440118 ZNF56Q15929 161 aa13.34□□□□□ -0.27
SHROOM1-204ENST00000440118 TAGLN2P37802 199 aaKnown RBP13.33□□□□□ -0.28
SHROOM1-204ENST00000440118 RPL36AP83881 106 aaKnown RBP13.33□□□□□ -0.28
SHROOM1-204ENST00000440118 TOR2AQ5JU69 321 aa13.33□□□□□ -0.28
SHROOM1-204ENST00000440118 SPANXN1Q5VSR9 72 aa13.33□□□□□ -0.28
SHROOM1-204ENST00000440118 KCNIP4Q6PIL6 250 aa13.33□□□□□ -0.28
SHROOM1-204ENST00000440118 RPL36ALQ969Q0 106 aaKnown RBP13.33□□□□□ -0.28
SHROOM1-204ENST00000440118 TM2D2Q9BX73 214 aa13.33□□□□□ -0.28
SHROOM1-204ENST00000440118 KRTAP4-5Q9BYR2 181 aa13.33□□□□□ -0.28
SHROOM1-204ENST00000440118 DNAH5Q8TE73 4624 aa13.33□□□□□ -0.28
SHROOM1-204ENST00000440118 IFNA1P01562 189 aa13.32□□□□□ -0.28
SHROOM1-204ENST00000440118 CXCL1P09341 107 aa13.32□□□□□ -0.28
SHROOM1-204ENST00000440118 OR10AG1Q8NH19 301 aa13.32□□□□□ -0.28
SHROOM1-204ENST00000440118 Q9UF83 564 aa13.32□□□□□ -0.28
SHROOM1-204ENST00000440118 IGLV5-52A0A0A0MRZ9 124 aa13.31□□□□□ -0.28
SHROOM1-204ENST00000440118 TRAV1-1A0A0B4J248 108 aa13.31□□□□□ -0.28
SHROOM1-204ENST00000440118 TRBV10-1A0A0K0K1A3 114 aa13.31□□□□□ -0.28
SHROOM1-204ENST00000440118 SSTP61278 116 aa13.31□□□□□ -0.28
SHROOM1-204ENST00000440118 CCL20P78556 96 aa13.31□□□□□ -0.28
SHROOM1-204ENST00000440118 CENPWQ5EE01 88 aa13.31□□□□□ -0.28
SHROOM1-204ENST00000440118 Q8N1X5 172 aa13.31□□□□□ -0.28
SHROOM1-204ENST00000440118 Q8N3U1 123 aa13.31□□□□□ -0.28
SHROOM1-204ENST00000440118 DERL1Q9BUN8 251 aa13.31□□□□□ -0.28
SHROOM1-204ENST00000440118 MLST8Q9BVC4 326 aa13.31□□□□□ -0.28
SHROOM1-204ENST00000440118 APOBP04114 4563 aaKnown RBP13.3□□□□□ -0.28
SHROOM1-204ENST00000440118 TRAV8-3A0A0A6YYJ7 113 aa13.3□□□□□ -0.28
SHROOM1-204ENST00000440118 MUC21A0A0G2JKD1 596 aa13.3□□□□□ -0.28
SHROOM1-204ENST00000440118 MUC21A0A140T8X8 626 aa13.3□□□□□ -0.28
SHROOM1-204ENST00000440118 SMIM17P0DL12 118 aa13.3□□□□□ -0.28
SHROOM1-204ENST00000440118 DAZAP1Q96EP5 407 aaKnown RBP13.3□□□□□ -0.28
SHROOM1-204ENST00000440118 F5H697 171 aa13.29□□□□□ -0.28
SHROOM1-204ENST00000440118 GCSHP23434 173 aa13.29□□□□□ -0.28
SHROOM1-204ENST00000440118 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.29□□□□□ -0.28
SHROOM1-204ENST00000440118 C11orf52Q96A22 123 aa13.29□□□□□ -0.28
SHROOM1-204ENST00000440118 TPPP3Q9BW30 176 aa13.29□□□□□ -0.28
SHROOM1-204ENST00000440118 TRBV7-3A0A075B6L6 115 aa13.28□□□□□ -0.28
SHROOM1-204ENST00000440118 A0A087WX48 190 aa13.28□□□□□ -0.28
SHROOM1-204ENST00000440118 TMEM218A2RU14 115 aa13.28□□□□□ -0.28
SHROOM1-204ENST00000440118 GNG4P50150 75 aa13.28□□□□□ -0.28
SHROOM1-204ENST00000440118 RAB4BP61018 213 aa13.28□□□□□ -0.28
SHROOM1-204ENST00000440118 MEF2BQ02080 365 aaPredicted RBP13.28□□□□□ -0.28
SHROOM1-204ENST00000440118 DAZ4Q86SG3 579 aaKnown RBP13.28□□□□□ -0.28
SHROOM1-204ENST00000440118 SVBPQ8N300 66 aa13.28□□□□□ -0.28
SHROOM1-204ENST00000440118 NTN5Q8WTR8 489 aaPredicted RBP13.28□□□□□ -0.28
SHROOM1-204ENST00000440118 DAZ3Q9NR90 486 aaKnown RBP13.28□□□□□ -0.28
SHROOM1-204ENST00000440118 LRCOL1A6NCL2 159 aa13.27□□□□□ -0.29
SHROOM1-204ENST00000440118 SNAI2O43623 268 aa13.27□□□□□ -0.29
SHROOM1-204ENST00000440118 PDE6DO43924 150 aa13.27□□□□□ -0.29
SHROOM1-204ENST00000440118 NDUFS6O75380 124 aaKnown RBP13.27□□□□□ -0.29
SHROOM1-204ENST00000440118 OR5AL1P0C617 328 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms