RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 IGLV5-52A0A0A0MRZ9 124 aa12.63□□□□□ -0.39
CCDC78-204ENST00000439619 M0R381 172 aa12.63□□□□□ -0.39
CCDC78-204ENST00000439619 BCL2L11O43521 198 aa12.63□□□□□ -0.39
CCDC78-204ENST00000439619 MBD3L1Q8WWY6 194 aa12.63□□□□□ -0.39
CCDC78-204ENST00000439619 URGCP-MRPS24S4R325 110 aa12.63□□□□□ -0.39
CCDC78-204ENST00000439619 LRP1BQ9NZR2 4599 aa12.63□□□□□ -0.39
CCDC78-204ENST00000439619 TRAV8-3A0A0A6YYJ7 113 aa12.62□□□□□ -0.39
CCDC78-204ENST00000439619 EPM2AB3EWF7 344 aa12.62□□□□□ -0.39
CCDC78-204ENST00000439619 SFRP2Q96HF1 295 aa12.62□□□□□ -0.39
CCDC78-204ENST00000439619 SAMD10Q9BYL1 202 aa12.62□□□□□ -0.39
CCDC78-204ENST00000439619 JPT2Q9H910 190 aa12.62□□□□□ -0.39
CCDC78-204ENST00000439619 HSPG2P98160 4391 aa12.62□□□□□ -0.39
CCDC78-204ENST00000439619 H2AFB1P0C5Y9 115 aa12.61□□□□□ -0.39
CCDC78-204ENST00000439619 UFSP1Q6NVU6 142 aa12.61□□□□□ -0.39
CCDC78-204ENST00000439619 A0A087WWL8 130 aa12.6□□□□□ -0.39
CCDC78-204ENST00000439619 A0A1B0GV50 99 aa12.6□□□□□ -0.39
CCDC78-204ENST00000439619 LINC00694P0DN24 101 aa12.6□□□□□ -0.39
CCDC78-204ENST00000439619 KCNIP4Q6PIL6 250 aa12.6□□□□□ -0.39
CCDC78-204ENST00000439619 C14orf178Q8N769 122 aaPredicted RBP12.6□□□□□ -0.39
CCDC78-204ENST00000439619 COX11Q9Y6N1 276 aa12.6□□□□□ -0.39
CCDC78-204ENST00000439619 KRTAP10-1P60331 282 aa12.59□□□□□ -0.39
CCDC78-204ENST00000439619 RPL36AP83881 106 aaKnown RBP12.59□□□□□ -0.39
CCDC78-204ENST00000439619 BAGE2Q86Y30 109 aa12.59□□□□□ -0.39
CCDC78-204ENST00000439619 RPL36ALQ969Q0 106 aaKnown RBP12.59□□□□□ -0.39
CCDC78-204ENST00000439619 TRBV10-1A0A0K0K1A3 114 aa12.58□□□□□ -0.4
CCDC78-204ENST00000439619 LRCOL1A6NCL2 159 aa12.58□□□□□ -0.4
CCDC78-204ENST00000439619 TEX46H3BTG2 121 aa12.58□□□□□ -0.4
CCDC78-204ENST00000439619 EIF5AL1Q6IS14 154 aaKnown RBP12.58□□□□□ -0.4
CCDC78-204ENST00000439619 Q8N814 137 aa12.58□□□□□ -0.4
CCDC78-204ENST00000439619 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.58□□□□□ -0.4
CCDC78-204ENST00000439619 FRZBQ92765 325 aa12.58□□□□□ -0.4
CCDC78-204ENST00000439619 RMI2Q96E14 147 aa12.58□□□□□ -0.4
CCDC78-204ENST00000439619 SCO2A0A1W2PP80 73 aa12.57□□□□□ -0.4
CCDC78-204ENST00000439619 CXCL1P09341 107 aa12.56□□□□□ -0.4
CCDC78-204ENST00000439619 XGP55808 180 aa12.56□□□□□ -0.4
CCDC78-204ENST00000439619 ELOBQ15370 118 aa12.56□□□□□ -0.4
CCDC78-204ENST00000439619 TMUB2Q71RG4 321 aa12.56□□□□□ -0.4
CCDC78-204ENST00000439619 MANBALQ9NQG1 85 aa12.56□□□□□ -0.4
CCDC78-204ENST00000439619 A0A087WX48 190 aa12.55□□□□□ -0.4
CCDC78-204ENST00000439619 RAB5CP51148 216 aa12.55□□□□□ -0.4
CCDC78-204ENST00000439619 PRR27Q6MZM9 219 aa12.55□□□□□ -0.4
CCDC78-204ENST00000439619 DAZ4Q86SG3 579 aaKnown RBP12.55□□□□□ -0.4
CCDC78-204ENST00000439619 DAZ3Q9NR90 486 aaKnown RBP12.55□□□□□ -0.4
CCDC78-204ENST00000439619 Q9UF83 564 aa12.55□□□□□ -0.4
CCDC78-204ENST00000439619 DNAH5Q8TE73 4624 aa12.55□□□□□ -0.4
CCDC78-204ENST00000439619 ABCA13Q86UQ4 5058 aa12.54□□□□□ -0.4
CCDC78-204ENST00000439619 TRBV7-3A0A075B6L6 115 aa12.54□□□□□ -0.4
CCDC78-204ENST00000439619 RAB4BP61018 213 aa12.54□□□□□ -0.4
CCDC78-204ENST00000439619 ZNF56Q15929 161 aa12.54□□□□□ -0.4
CCDC78-204ENST00000439619 SPANXN1Q5VSR9 72 aa12.54□□□□□ -0.4
CCDC78-204ENST00000439619 TMEM70Q9BUB7 260 aa12.54□□□□□ -0.4
CCDC78-204ENST00000439619 CHCHD7Q9BUK0 85 aa12.54□□□□□ -0.4
CCDC78-204ENST00000439619 MLST8Q9BVC4 326 aa12.54□□□□□ -0.4
CCDC78-204ENST00000439619 NIT1Q86X76 327 aa12.53□□□□□ -0.4
CCDC78-204ENST00000439619 GNG13Q9P2W3 67 aa12.53□□□□□ -0.4
CCDC78-204ENST00000439619 OR5AL1P0C617 328 aa12.52□□□□□ -0.41
CCDC78-204ENST00000439619 SMIM17P0DL12 118 aa12.52□□□□□ -0.41
CCDC78-204ENST00000439619 RPL19P84098 196 aaKnown RBP12.52□□□□□ -0.41
CCDC78-204ENST00000439619 Q8N3U1 123 aa12.52□□□□□ -0.41
CCDC78-204ENST00000439619 APOBP04114 4563 aaKnown RBP12.52□□□□□ -0.41
CCDC78-204ENST00000439619 F5H697 171 aa12.51□□□□□ -0.41
CCDC78-204ENST00000439619 FAM229AH3BQW9 127 aa12.51□□□□□ -0.41
CCDC78-204ENST00000439619 RPL35P42766 123 aaKnown RBP12.51□□□□□ -0.41
CCDC78-204ENST00000439619 UBE2D3P61077 147 aa12.51□□□□□ -0.41
CCDC78-204ENST00000439619 UBE2D2P62837 147 aa12.51□□□□□ -0.41
CCDC78-204ENST00000439619 Q5VSD8 79 aa12.51□□□□□ -0.41
CCDC78-204ENST00000439619 OR10AG1Q8NH19 301 aa12.51□□□□□ -0.41
CCDC78-204ENST00000439619 DAZAP1Q96EP5 407 aaKnown RBP12.51□□□□□ -0.41
CCDC78-204ENST00000439619 TRAV1-1A0A0B4J248 108 aa12.5□□□□□ -0.41
CCDC78-204ENST00000439619 SNAI2O43623 268 aa12.5□□□□□ -0.41
CCDC78-204ENST00000439619 OR10G8Q8NGN5 311 aa12.5□□□□□ -0.41
CCDC78-204ENST00000439619 SSBP4Q9BWG4 385 aaPredicted RBP12.5□□□□□ -0.41
CCDC78-204ENST00000439619 KLK12Q9UKR0 248 aa12.5□□□□□ -0.41
CCDC78-204ENST00000439619 TMEM262E9PQX1 116 aa12.49□□□□□ -0.41
CCDC78-204ENST00000439619 IFNA1P01562 189 aa12.49□□□□□ -0.41
CCDC78-204ENST00000439619 C1QBP02746 253 aa12.49□□□□□ -0.41
CCDC78-204ENST00000439619 INAFM2P0DMQ5 153 aa12.49□□□□□ -0.41
CCDC78-204ENST00000439619 PKIAP61925 76 aa12.49□□□□□ -0.41
CCDC78-204ENST00000439619 IGKV2D-24A0A075B6R9 120 aa12.48□□□□□ -0.41
CCDC78-204ENST00000439619 RPS20P60866 119 aaKnown RBP12.48□□□□□ -0.41
CCDC78-204ENST00000439619 Q0VG73 95 aa12.48□□□□□ -0.41
CCDC78-204ENST00000439619 TMEM97Q5BJF2 176 aa12.48□□□□□ -0.41
CCDC78-204ENST00000439619 C11orf52Q96A22 123 aa12.48□□□□□ -0.41
CCDC78-204ENST00000439619 UBE2WQ96B02 151 aa12.48□□□□□ -0.41
CCDC78-204ENST00000439619 AP1S3Q96PC3 154 aa12.48□□□□□ -0.41
CCDC78-204ENST00000439619 TRBV6-8A0A0A6YYG3 113 aa12.47□□□□□ -0.41
CCDC78-204ENST00000439619 XKRY2A2RUG3 117 aa12.47□□□□□ -0.41
CCDC78-204ENST00000439619 RBFOX3A6NFN3 312 aa12.47□□□□□ -0.41
CCDC78-204ENST00000439619 PDE6DO43924 150 aa12.47□□□□□ -0.41
CCDC78-204ENST00000439619 SSTP61278 116 aa12.47□□□□□ -0.41
CCDC78-204ENST00000439619 Q8N976 141 aa12.47□□□□□ -0.41
CCDC78-204ENST00000439619 SMIM12Q96EX1 92 aa12.47□□□□□ -0.41
CCDC78-204ENST00000439619 MUC21A0A0G2JKD1 596 aa12.46□□□□□ -0.41
CCDC78-204ENST00000439619 MUC21A0A140T8X8 626 aa12.46□□□□□ -0.41
CCDC78-204ENST00000439619 LECT2O14960 151 aa12.46□□□□□ -0.41
CCDC78-204ENST00000439619 CRPP02741 224 aa12.46□□□□□ -0.41
CCDC78-204ENST00000439619 SMR3BP02814 79 aaPredicted RBP12.46□□□□□ -0.41
CCDC78-204ENST00000439619 GNG4P50150 75 aa12.46□□□□□ -0.41
CCDC78-204ENST00000439619 CCL20P78556 96 aa12.46□□□□□ -0.41
CCDC78-204ENST00000439619 CENPWQ5EE01 88 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms