RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 GAGE2BQ13066 116 aa10.11□□□□□ -0.79
ACTN1-204ENST00000438964 GAGE2EQ4V326 116 aa10.11□□□□□ -0.79
ACTN1-204ENST00000438964 DPH3P1Q9H4G8 78 aa10.11□□□□□ -0.79
ACTN1-204ENST00000438964 GAGE2DQ9UEU5 116 aa10.11□□□□□ -0.79
ACTN1-204ENST00000438964 CD3EP07766 207 aa10.11□□□□□ -0.79
ACTN1-204ENST00000438964 RNASE13Q5GAN3 156 aaKnown RBP10.11□□□□□ -0.79
ACTN1-204ENST00000438964 UNQ9165/PRO28630Q6UXU0 137 aa10.11□□□□□ -0.79
ACTN1-204ENST00000438964 RNF5Q99942 180 aa10.11□□□□□ -0.79
ACTN1-204ENST00000438964 IGHV3-11P01762 117 aa10.1□□□□□ -0.79
ACTN1-204ENST00000438964 HERV-K104P63124 156 aa10.1□□□□□ -0.79
ACTN1-204ENST00000438964 METTL26Q96S19 204 aa10.1□□□□□ -0.79
ACTN1-204ENST00000438964 PRRC2AP48634 2157 aaKnown RBP10.1□□□□□ -0.79
ACTN1-204ENST00000438964 SCGB2A1O75556 95 aa10.09□□□□□ -0.79
ACTN1-204ENST00000438964 PRSS2P07478 247 aa10.09□□□□□ -0.79
ACTN1-204ENST00000438964 ASIPP42127 132 aa10.09□□□□□ -0.79
ACTN1-204ENST00000438964 SRSF2Q01130 221 aaKnown RBP10.09□□□□□ -0.79
ACTN1-204ENST00000438964 FAM159AQ6UWV7 190 aa10.09□□□□□ -0.79
ACTN1-204ENST00000438964 EDN2P20800 178 aa10.09□□□□□ -0.79
ACTN1-204ENST00000438964 MUSTN1Q8IVN3 82 aa10.09□□□□□ -0.79
ACTN1-204ENST00000438964 Q8N1Y9 231 aa10.09□□□□□ -0.79
ACTN1-204ENST00000438964 Q8N9W7 124 aa10.09□□□□□ -0.79
ACTN1-204ENST00000438964 J3QQQ9 107 aa10.09□□□□□ -0.79
ACTN1-204ENST00000438964 LGALS3P17931 250 aaKnown RBP10.09□□□□□ -0.79
ACTN1-204ENST00000438964 NDUFV3P56181 108 aaKnown RBP10.09□□□□□ -0.79
ACTN1-204ENST00000438964 GPHB5Q86YW7 130 aa10.09□□□□□ -0.79
ACTN1-204ENST00000438964 ZFAND2AQ8N6M9 145 aa10.08□□□□□ -0.8
ACTN1-204ENST00000438964 A8MZ25 164 aa10.08□□□□□ -0.8
ACTN1-204ENST00000438964 B9A039 149 aa10.08□□□□□ -0.8
ACTN1-204ENST00000438964 ZFP36P26651 326 aaKnown RBP10.08□□□□□ -0.8
ACTN1-204ENST00000438964 HERVK_113P61574 105 aa10.08□□□□□ -0.8
ACTN1-204ENST00000438964 TIMD4Q96H15 378 aa10.07□□□□□ -0.8
ACTN1-204ENST00000438964 SLC25A29Q8N8R3 303 aa10.07□□□□□ -0.8
ACTN1-204ENST00000438964 CITED1Q99966 193 aa10.07□□□□□ -0.8
ACTN1-204ENST00000438964 RBAKDNA6NC62 111 aa10.07□□□□□ -0.8
ACTN1-204ENST00000438964 RNASE3P12724 160 aaKnown RBP10.07□□□□□ -0.8
ACTN1-204ENST00000438964 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
ACTN1-204ENST00000438964 PMVKQ15126 192 aa10.06□□□□□ -0.8
ACTN1-204ENST00000438964 C9orf47Q6ZRZ4 202 aa10.06□□□□□ -0.8
ACTN1-204ENST00000438964 NCOR2Q9Y618 2525 aa10.06□□□□□ -0.8
ACTN1-204ENST00000438964 SDHAF1A6NFY7 115 aa10.06□□□□□ -0.8
ACTN1-204ENST00000438964 CDSNQ15517 529 aa10.06□□□□□ -0.8
ACTN1-204ENST00000438964 SUMO4Q6EEV6 95 aa10.06□□□□□ -0.8
ACTN1-204ENST00000438964 CEMP1Q6PRD7 247 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-204ENST00000438964 DUX3Q96PT4 197 aa10.06□□□□□ -0.8
ACTN1-204ENST00000438964 LINC01619G3V211 115 aa10.05□□□□□ -0.8
ACTN1-204ENST00000438964 IGHV3-33P01772 117 aa10.05□□□□□ -0.8
ACTN1-204ENST00000438964 LYRM7Q5U5X0 104 aa10.05□□□□□ -0.8
ACTN1-204ENST00000438964 CLEC2BQ92478 149 aa10.05□□□□□ -0.8
ACTN1-204ENST00000438964 SPXQ9BT56 116 aa10.05□□□□□ -0.8
ACTN1-204ENST00000438964 IGIPA6NJ69 53 aa10.05□□□□□ -0.8
ACTN1-204ENST00000438964 DAND5Q8N907 189 aa10.05□□□□□ -0.8
ACTN1-204ENST00000438964 OR10J6PQ8NGY7 276 aa10.05□□□□□ -0.8
ACTN1-204ENST00000438964 AMELXQ99217 191 aa10.05□□□□□ -0.8
ACTN1-204ENST00000438964 VCX2Q9H322 139 aa10.05□□□□□ -0.8
ACTN1-204ENST00000438964 TRAV12-2A0A075B6T6 113 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 ODF3BA8MYP8 253 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 HTN1P15515 57 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 CENPEQ02224 2701 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 CHD8Q9HCK8 2581 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 IGHV4-4A0A075B6R2 117 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 TRAV8-3A0A0A6YYJ7 113 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 IGHV3-73A0A0B4J1V6 119 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 TRAV12-3A0A0B4J271 114 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 TRAV21A0A0B4J279 112 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 GAGE12JA6NER3 117 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 RHODO00212 210 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 GAGE7O76087 117 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 GAGE12FP0CL80 117 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 GAGE12GP0CL81 117 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 GAGE12IP0CL82 117 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 GAGE4Q13068 117 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 CHCHD5Q9BSY4 110 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 TRBV7-9A0A0J9YWB2 115 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 LY6G5BQ8NDX9 201 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 UBTD1Q9HAC8 227 aa10.04□□□□□ -0.8
ACTN1-204ENST00000438964 A0A0U1RRA0 63 aa10.03□□□□□ -0.8
ACTN1-204ENST00000438964 IFITM1P13164 125 aa10.03□□□□□ -0.8
ACTN1-204ENST00000438964 IGFL3Q6UXB1 125 aa10.03□□□□□ -0.8
ACTN1-204ENST00000438964 ODF3Q96PU9 254 aa10.03□□□□□ -0.8
ACTN1-204ENST00000438964 TRIAP1O43715 76 aa10.03□□□□□ -0.8
ACTN1-204ENST00000438964 ZNF56Q15929 161 aa10.03□□□□□ -0.8
ACTN1-204ENST00000438964 LINC01620Q4KN68 170 aa10.03□□□□□ -0.8
ACTN1-204ENST00000438964 Q8NA96 180 aa10.03□□□□□ -0.8
ACTN1-204ENST00000438964 TRAV8-4A0A0B4J246 113 aa10.02□□□□□ -0.8
ACTN1-204ENST00000438964 RPL32P62910 135 aaKnown RBP10.02□□□□□ -0.8
ACTN1-204ENST00000438964 Q8N6K4 173 aa10.02□□□□□ -0.8
ACTN1-204ENST00000438964 FAM110DQ8TAY7 271 aaPredicted RBP10.02□□□□□ -0.8
ACTN1-204ENST00000438964 TMEM263Q8WUH6 116 aaKnown RBP10.02□□□□□ -0.8
ACTN1-204ENST00000438964 TMEM262E9PQX1 116 aa10.02□□□□□ -0.81
ACTN1-204ENST00000438964 SBSPONQ8IVN8 264 aa10.02□□□□□ -0.81
ACTN1-204ENST00000438964 SAA4P35542 130 aa10.01□□□□□ -0.81
ACTN1-204ENST00000438964 EEF1AKMT3Q96AZ1 226 aa10.01□□□□□ -0.81
ACTN1-204ENST00000438964 MUC6Q6W4X9 2439 aa10.01□□□□□ -0.81
ACTN1-204ENST00000438964 ZANQ9Y493 2812 aa10.01□□□□□ -0.81
ACTN1-204ENST00000438964 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-204ENST00000438964 HIVEP3Q5T1R4 2406 aa10.01□□□□□ -0.81
ACTN1-204ENST00000438964 LINC00315P59091 139 aa10.01□□□□□ -0.81
ACTN1-204ENST00000438964 KLK9Q9UKQ9 250 aa10.01□□□□□ -0.81
ACTN1-204ENST00000438964 PRM2P04554 102 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms