RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 A0A1B0GVG6 124 aa16.84■□□□□ 0.29
RAPGEF1-206ENST00000438647 GTSF1LQ9H1H1 148 aa16.84■□□□□ 0.29
RAPGEF1-206ENST00000438647 A0A087WWL8 130 aa16.83■□□□□ 0.28
RAPGEF1-206ENST00000438647 OR5AL1P0C617 328 aa16.83■□□□□ 0.28
RAPGEF1-206ENST00000438647 NFE4Q86UQ8 179 aa16.83■□□□□ 0.28
RAPGEF1-206ENST00000438647 C10orf126Q8N4M7 172 aa16.83■□□□□ 0.28
RAPGEF1-206ENST00000438647 BIN3Q9NQY0 253 aa16.83■□□□□ 0.28
RAPGEF1-206ENST00000438647 IGHV3-38A0A0C4DH36 116 aa16.82■□□□□ 0.28
RAPGEF1-206ENST00000438647 RAB19A4D1S5 217 aa16.82■□□□□ 0.28
RAPGEF1-206ENST00000438647 SNAI2O43623 268 aa16.82■□□□□ 0.28
RAPGEF1-206ENST00000438647 IGLV2-8P01709 118 aa16.82■□□□□ 0.28
RAPGEF1-206ENST00000438647 OR10J3Q5JRS4 329 aa16.82■□□□□ 0.28
RAPGEF1-206ENST00000438647 LELP1Q5T871 98 aa16.82■□□□□ 0.28
RAPGEF1-206ENST00000438647 SSBP4Q9BWG4 385 aaPredicted RBP16.82■□□□□ 0.28
RAPGEF1-206ENST00000438647 GAGE12JA6NER3 117 aa16.81■□□□□ 0.28
RAPGEF1-206ENST00000438647 CRYGDP07320 174 aa16.81■□□□□ 0.28
RAPGEF1-206ENST00000438647 NKX2-5P52952 324 aaPredicted RBP16.81■□□□□ 0.28
RAPGEF1-206ENST00000438647 GAGE1Q13065 139 aa16.81■□□□□ 0.28
RAPGEF1-206ENST00000438647 GAGE4Q13068 117 aa16.81■□□□□ 0.28
RAPGEF1-206ENST00000438647 GAGE5Q13069 117 aa16.81■□□□□ 0.28
RAPGEF1-206ENST00000438647 GAGE13Q4V321 117 aa16.81■□□□□ 0.28
RAPGEF1-206ENST00000438647 C14orf178Q8N769 122 aaPredicted RBP16.81■□□□□ 0.28
RAPGEF1-206ENST00000438647 OR10AG1Q8NH19 301 aa16.81■□□□□ 0.28
RAPGEF1-206ENST00000438647 RPS20P60866 119 aaKnown RBP16.8■□□□□ 0.28
RAPGEF1-206ENST00000438647 SPANXN1Q5VSR9 72 aa16.8■□□□□ 0.28
RAPGEF1-206ENST00000438647 LINC00694P0DN24 101 aa16.79■□□□□ 0.28
RAPGEF1-206ENST00000438647 LINC01556Q5JQF7 62 aa16.79■□□□□ 0.28
RAPGEF1-206ENST00000438647 TRBV20OR9-2A0A075B6H5 130 aa16.78■□□□□ 0.28
RAPGEF1-206ENST00000438647 TRBV10-1A0A0K0K1A3 114 aa16.78■□□□□ 0.28
RAPGEF1-206ENST00000438647 XKRY2A2RUG3 117 aa16.78■□□□□ 0.28
RAPGEF1-206ENST00000438647 C19orf71A6NCJ1 209 aa16.78■□□□□ 0.28
RAPGEF1-206ENST00000438647 OR2D3Q8NGH3 330 aa16.78■□□□□ 0.28
RAPGEF1-206ENST00000438647 LYPD6BQ8NI32 183 aa16.78■□□□□ 0.28
RAPGEF1-206ENST00000438647 P01737 135 aa16.77■□□□□ 0.28
RAPGEF1-206ENST00000438647 Q6ZRN7 208 aaPredicted RBP16.77■□□□□ 0.28
RAPGEF1-206ENST00000438647 MSRB1Q9NZV6 116 aa16.77■□□□□ 0.28
RAPGEF1-206ENST00000438647 A0A087WWC5 75 aa16.76■□□□□ 0.27
RAPGEF1-206ENST00000438647 RBFOX3A6NFN3 312 aa16.76■□□□□ 0.27
RAPGEF1-206ENST00000438647 TMEM250H0YL14 139 aa16.75■□□□□ 0.27
RAPGEF1-206ENST00000438647 RAB4BP61018 213 aa16.75■□□□□ 0.27
RAPGEF1-206ENST00000438647 RPL36AP83881 106 aaKnown RBP16.74■□□□□ 0.27
RAPGEF1-206ENST00000438647 ZNF56Q15929 161 aa16.74■□□□□ 0.27
RAPGEF1-206ENST00000438647 FER1L6-AS1Q8NA97 138 aa16.74■□□□□ 0.27
RAPGEF1-206ENST00000438647 RPL36ALQ969Q0 106 aaKnown RBP16.74■□□□□ 0.27
RAPGEF1-206ENST00000438647 AP1S3Q96PC3 154 aa16.74■□□□□ 0.27
RAPGEF1-206ENST00000438647 TPPP3Q9BW30 176 aa16.74■□□□□ 0.27
RAPGEF1-206ENST00000438647 Q9UF83 564 aa16.74■□□□□ 0.27
RAPGEF1-206ENST00000438647 MUC21A0A0G2JKD1 596 aa16.73■□□□□ 0.27
RAPGEF1-206ENST00000438647 MUC21A0A140T8X8 626 aa16.73■□□□□ 0.27
RAPGEF1-206ENST00000438647 C16orf90A8MZG2 172 aa16.73■□□□□ 0.27
RAPGEF1-206ENST00000438647 IGLC6P0CF74 106 aa16.73■□□□□ 0.27
RAPGEF1-206ENST00000438647 SMIM17P0DL12 118 aa16.73■□□□□ 0.27
RAPGEF1-206ENST00000438647 TNFRSF18Q9Y5U5 241 aa16.73■□□□□ 0.27
RAPGEF1-206ENST00000438647 KIAA1109Q2LD37 5005 aa16.73■□□□□ 0.27
RAPGEF1-206ENST00000438647 GZMBP10144 247 aa16.72■□□□□ 0.27
RAPGEF1-206ENST00000438647 SSTP61278 116 aa16.72■□□□□ 0.27
RAPGEF1-206ENST00000438647 HERC2O95714 4834 aa16.71■□□□□ 0.27
RAPGEF1-206ENST00000438647 F2Z2F3 143 aa16.71■□□□□ 0.27
RAPGEF1-206ENST00000438647 EREGO14944 169 aa16.71■□□□□ 0.27
RAPGEF1-206ENST00000438647 ERVFC1-1P60608 527 aa16.71■□□□□ 0.27
RAPGEF1-206ENST00000438647 CACNG7P62955 275 aa16.71■□□□□ 0.27
RAPGEF1-206ENST00000438647 SPATA12Q7Z6I5 190 aa16.71■□□□□ 0.27
RAPGEF1-206ENST00000438647 TRBV7-3A0A075B6L6 115 aa16.7■□□□□ 0.26
RAPGEF1-206ENST00000438647 IBA57-AS1B1ANH7 110 aa16.69■□□□□ 0.26
RAPGEF1-206ENST00000438647 F5H697 171 aa16.69■□□□□ 0.26
RAPGEF1-206ENST00000438647 IGHV3-30P01768 117 aa16.69■□□□□ 0.26
RAPGEF1-206ENST00000438647 IGHV3-33P01772 117 aa16.69■□□□□ 0.26
RAPGEF1-206ENST00000438647 IGHV3-30-3P0DP02 117 aa16.69■□□□□ 0.26
RAPGEF1-206ENST00000438647 IGHV3-30-5P0DP03 117 aa16.69■□□□□ 0.26
RAPGEF1-206ENST00000438647 NUDT10Q8NFP7 164 aa16.69■□□□□ 0.26
RAPGEF1-206ENST00000438647 OR10G8Q8NGN5 311 aa16.69■□□□□ 0.26
RAPGEF1-206ENST00000438647 NUDT11Q96G61 164 aa16.69■□□□□ 0.26
RAPGEF1-206ENST00000438647 EIF5A2Q9GZV4 153 aaKnown RBP16.69■□□□□ 0.26
RAPGEF1-206ENST00000438647 NDUFS6O75380 124 aaKnown RBP16.68■□□□□ 0.26
RAPGEF1-206ENST00000438647 TOR2AQ5JU69 321 aa16.68■□□□□ 0.26
RAPGEF1-206ENST00000438647 OCC1Q8TAD7 63 aa16.68■□□□□ 0.26
RAPGEF1-206ENST00000438647 UBE2D3P61077 147 aa16.67■□□□□ 0.26
RAPGEF1-206ENST00000438647 UBE2D2P62837 147 aa16.67■□□□□ 0.26
RAPGEF1-206ENST00000438647 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.67■□□□□ 0.26
RAPGEF1-206ENST00000438647 LRP1BQ9NZR2 4599 aa16.67■□□□□ 0.26
RAPGEF1-206ENST00000438647 K7EN84 100 aa16.66■□□□□ 0.26
RAPGEF1-206ENST00000438647 LAGE3Q14657 143 aa16.66■□□□□ 0.26
RAPGEF1-206ENST00000438647 FAM210AQ96ND0 272 aa16.66■□□□□ 0.26
RAPGEF1-206ENST00000438647 RPP21Q9H633 154 aaKnown RBP16.66■□□□□ 0.26
RAPGEF1-206ENST00000438647 KIF25-AS1Q9Y6Z4 181 aa16.66■□□□□ 0.26
RAPGEF1-206ENST00000438647 CEBPGP53567 150 aa16.65■□□□□ 0.26
RAPGEF1-206ENST00000438647 NEXN-AS1Q8NBZ9 246 aa16.65■□□□□ 0.26
RAPGEF1-206ENST00000438647 RNASE7Q9H1E1 156 aaKnown RBP16.65■□□□□ 0.26
RAPGEF1-206ENST00000438647 URGCP-MRPS24S4R325 110 aa16.65■□□□□ 0.26
RAPGEF1-206ENST00000438647 PSCAO43653 123 aa16.64■□□□□ 0.25
RAPGEF1-206ENST00000438647 TRGC1P0CF51 173 aa16.64■□□□□ 0.25
RAPGEF1-206ENST00000438647 LYZL1Q6UWQ5 148 aa16.64■□□□□ 0.25
RAPGEF1-206ENST00000438647 WDR73Q6P4I2 378 aa16.63■□□□□ 0.25
RAPGEF1-206ENST00000438647 Q9HAA7 133 aa16.63■□□□□ 0.25
RAPGEF1-206ENST00000438647 H7C1H1 209 aa16.62■□□□□ 0.25
RAPGEF1-206ENST00000438647 CTRLP40313 264 aa16.62■□□□□ 0.25
RAPGEF1-206ENST00000438647 KRTAP10-2P60368 255 aa16.62■□□□□ 0.25
RAPGEF1-206ENST00000438647 A0A087WTM6 91 aa16.61■□□□□ 0.25
RAPGEF1-206ENST00000438647 MGPP08493 103 aa16.61■□□□□ 0.25
RAPGEF1-206ENST00000438647 SMIM7Q9BQ49 75 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 206.3 ms