RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 S100A8P05109 93 aa12.98□□□□□ -0.33
HDAC6-208ENST00000438518 ZNF479Q96JC4 524 aa12.98□□□□□ -0.33
HDAC6-208ENST00000438518 TGP01266 2768 aa12.97□□□□□ -0.33
HDAC6-208ENST00000438518 MUC21A0A0G2JKD1 596 aa12.97□□□□□ -0.33
HDAC6-208ENST00000438518 MUC21A0A140T8X8 626 aa12.97□□□□□ -0.33
HDAC6-208ENST00000438518 F5H768 121 aa12.97□□□□□ -0.33
HDAC6-208ENST00000438518 H3BNG1 76 aa12.97□□□□□ -0.33
HDAC6-208ENST00000438518 BTF3L4Q96K17 158 aa12.97□□□□□ -0.33
HDAC6-208ENST00000438518 PRO0255Q9UI72 69 aa12.97□□□□□ -0.33
HDAC6-208ENST00000438518 KLK5Q9Y337 293 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-208ENST00000438518 NACAE9PAV3 2078 aa12.97□□□□□ -0.33
HDAC6-208ENST00000438518 C3orf84H3BNL1 204 aa12.96□□□□□ -0.33
HDAC6-208ENST00000438518 IGHV3-53P01767 116 aa12.96□□□□□ -0.33
HDAC6-208ENST00000438518 CRYGDP07320 174 aa12.96□□□□□ -0.33
HDAC6-208ENST00000438518 HTN3P15516 51 aa12.96□□□□□ -0.33
HDAC6-208ENST00000438518 TCTAP57738 103 aa12.96□□□□□ -0.33
HDAC6-208ENST00000438518 FHL2Q14192 279 aa12.96□□□□□ -0.33
HDAC6-208ENST00000438518 UFSP1Q6NVU6 142 aa12.96□□□□□ -0.33
HDAC6-208ENST00000438518 CEMP1Q6PRD7 247 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-208ENST00000438518 DPH3P1Q9H4G8 78 aa12.96□□□□□ -0.33
HDAC6-208ENST00000438518 TRBV6-4A0A1B0GX49 114 aa12.95□□□□□ -0.34
HDAC6-208ENST00000438518 HOXA5P20719 270 aa12.95□□□□□ -0.34
HDAC6-208ENST00000438518 SSTP61278 116 aa12.95□□□□□ -0.34
HDAC6-208ENST00000438518 FAM74A4Q5TZK3 123 aa12.95□□□□□ -0.34
HDAC6-208ENST00000438518 C14orf178Q8N769 122 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-208ENST00000438518 FRZBQ92765 325 aa12.95□□□□□ -0.34
HDAC6-208ENST00000438518 TMEM191AQ9H0A3 160 aa12.95□□□□□ -0.34
HDAC6-208ENST00000438518 JPT2Q9H910 190 aa12.95□□□□□ -0.34
HDAC6-208ENST00000438518 MSRB1Q9NZV6 116 aa12.95□□□□□ -0.34
HDAC6-208ENST00000438518 KIF25-AS1Q9Y6Z4 181 aa12.95□□□□□ -0.34
HDAC6-208ENST00000438518 GATA1P15976 413 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-208ENST00000438518 FAM3BP58499 235 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-208ENST00000438518 RAB4BP61018 213 aa12.94□□□□□ -0.34
HDAC6-208ENST00000438518 HBBP68871 147 aa12.94□□□□□ -0.34
HDAC6-208ENST00000438518 RASL11AQ6T310 242 aa12.94□□□□□ -0.34
HDAC6-208ENST00000438518 SAMD10Q9BYL1 202 aa12.94□□□□□ -0.34
HDAC6-208ENST00000438518 HHLA3Q9XRX5 114 aa12.94□□□□□ -0.34
HDAC6-208ENST00000438518 A0A087WWL8 130 aa12.93□□□□□ -0.34
HDAC6-208ENST00000438518 EVI2AP22794 236 aa12.93□□□□□ -0.34
HDAC6-208ENST00000438518 CRYBA4P53673 196 aa12.93□□□□□ -0.34
HDAC6-208ENST00000438518 RHOHQ15669 191 aa12.93□□□□□ -0.34
HDAC6-208ENST00000438518 C15orf53Q8NAA6 179 aa12.93□□□□□ -0.34
HDAC6-208ENST00000438518 GATD1Q8NB37 220 aa12.93□□□□□ -0.34
HDAC6-208ENST00000438518 A0A1B0GXF2 115 aa12.92□□□□□ -0.34
HDAC6-208ENST00000438518 ZNF56Q15929 161 aa12.92□□□□□ -0.34
HDAC6-208ENST00000438518 TRAV26-1A0A087WT03 109 aa12.91□□□□□ -0.34
HDAC6-208ENST00000438518 H7C1H1 209 aa12.91□□□□□ -0.34
HDAC6-208ENST00000438518 S100A1P23297 94 aa12.91□□□□□ -0.34
HDAC6-208ENST00000438518 MRPL54Q6P161 138 aaKnown RBP12.91□□□□□ -0.34
HDAC6-208ENST00000438518 PRADC1Q9BSG0 188 aa12.91□□□□□ -0.34
HDAC6-208ENST00000438518 DNAH7Q8WXX0 4024 aa12.9□□□□□ -0.34
HDAC6-208ENST00000438518 IGHV3-73A0A0B4J1V6 119 aa12.9□□□□□ -0.34
HDAC6-208ENST00000438518 TRBV10-1A0A0K0K1A3 114 aa12.9□□□□□ -0.34
HDAC6-208ENST00000438518 K7EQD1 137 aa12.9□□□□□ -0.34
HDAC6-208ENST00000438518 PAX4O43316 350 aa12.9□□□□□ -0.34
HDAC6-208ENST00000438518 LINC00315P59091 139 aa12.9□□□□□ -0.34
HDAC6-208ENST00000438518 COX19Q49B96 90 aa12.9□□□□□ -0.34
HDAC6-208ENST00000438518 TMEM88Q6PEY1 159 aa12.9□□□□□ -0.34
HDAC6-208ENST00000438518 SLC25A29Q8N8R3 303 aa12.9□□□□□ -0.34
HDAC6-208ENST00000438518 F5H697 171 aa12.89□□□□□ -0.35
HDAC6-208ENST00000438518 MGPP08493 103 aa12.89□□□□□ -0.35
HDAC6-208ENST00000438518 CAMPP49913 170 aa12.89□□□□□ -0.35
HDAC6-208ENST00000438518 IGLL5B9A064 214 aa12.88□□□□□ -0.35
HDAC6-208ENST00000438518 ATRAIDQ6UW56 229 aa12.88□□□□□ -0.35
HDAC6-208ENST00000438518 VSIG2Q96IQ7 327 aa12.88□□□□□ -0.35
HDAC6-208ENST00000438518 SMCO4Q9NRQ5 59 aa12.88□□□□□ -0.35
HDAC6-208ENST00000438518 URGCP-MRPS24S4R325 110 aa12.88□□□□□ -0.35
HDAC6-208ENST00000438518 ZFAND6Q6FIF0 208 aa12.87□□□□□ -0.35
HDAC6-208ENST00000438518 SH2D6Q7Z4S9 175 aa12.87□□□□□ -0.35
HDAC6-208ENST00000438518 ICOSQ9Y6W8 199 aa12.87□□□□□ -0.35
HDAC6-208ENST00000438518 TRBV24-1A0A075B6N3 115 aa12.86□□□□□ -0.35
HDAC6-208ENST00000438518 ATP6V1G1O75348 118 aa12.86□□□□□ -0.35
HDAC6-208ENST00000438518 MRPL23Q16540 153 aaKnown RBP12.86□□□□□ -0.35
HDAC6-208ENST00000438518 CASC10Q5T4H9 136 aa12.86□□□□□ -0.35
HDAC6-208ENST00000438518 MRAP2Q96G30 205 aa12.86□□□□□ -0.35
HDAC6-208ENST00000438518 A0A0J9YY99 117 aa12.85□□□□□ -0.35
HDAC6-208ENST00000438518 ELOBQ15370 118 aa12.85□□□□□ -0.35
HDAC6-208ENST00000438518 FAM104BQ5XKR9 115 aa12.85□□□□□ -0.35
HDAC6-208ENST00000438518 SUMO4Q6EEV6 95 aa12.85□□□□□ -0.35
HDAC6-208ENST00000438518 DNAJC30Q96LL9 226 aa12.85□□□□□ -0.35
HDAC6-208ENST00000438518 M0QY20 66 aa12.84□□□□□ -0.35
HDAC6-208ENST00000438518 MT-ND6P03923 174 aa12.84□□□□□ -0.35
HDAC6-208ENST00000438518 GYPEP15421 78 aa12.84□□□□□ -0.35
HDAC6-208ENST00000438518 RAB4AP20338 218 aa12.84□□□□□ -0.35
HDAC6-208ENST00000438518 RPL36AP83881 106 aaKnown RBP12.84□□□□□ -0.35
HDAC6-208ENST00000438518 Q6ZSN1 163 aa12.84□□□□□ -0.35
HDAC6-208ENST00000438518 AMN1Q8IY45 258 aa12.84□□□□□ -0.35
HDAC6-208ENST00000438518 RPL36ALQ969Q0 106 aaKnown RBP12.84□□□□□ -0.35
HDAC6-208ENST00000438518 DYNC2H1Q8NCM8 4307 aaKnown RBP12.84□□□□□ -0.35
HDAC6-208ENST00000438518 PPP1R17O96001 155 aa12.83□□□□□ -0.36
HDAC6-208ENST00000438518 HLA-DQA1P01909 254 aa12.83□□□□□ -0.36
HDAC6-208ENST00000438518 SRIP30626 198 aa12.83□□□□□ -0.36
HDAC6-208ENST00000438518 RNF185Q96GF1 192 aa12.83□□□□□ -0.36
HDAC6-208ENST00000438518 GNB1LQ9BYB4 327 aa12.83□□□□□ -0.36
HDAC6-208ENST00000438518 APLNQ9ULZ1 77 aa12.83□□□□□ -0.36
HDAC6-208ENST00000438518 TRBV7-3A0A075B6L6 115 aa12.82□□□□□ -0.36
HDAC6-208ENST00000438518 A0A096LPF7 62 aa12.82□□□□□ -0.36
HDAC6-208ENST00000438518 PPBPP02775 128 aa12.82□□□□□ -0.36
HDAC6-208ENST00000438518 NIT2Q9NQR4 276 aa12.82□□□□□ -0.36
HDAC6-208ENST00000438518 NUDT3O95989 172 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms