RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 FOCADQ5VW36 1801 aa1.11□□□□□ -2.23
TRAPPC13-204ENST00000438419 PTPRDP23468 1912 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 LCE6AA0A183 80 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 GEMIN2O14893 280 aaKnown RBP1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 DHFRP00374 187 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 TMBIM6P55061 237 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 ARPP19P56211 112 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 CNBPP62633 177 aaKnown RBP1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 LTC4SQ16873 150 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 DEFB109BQ30KR1 87 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 TMEM254Q8TBM7 123 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 DYDC1Q8WWB3 177 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 PLEKHB2Q96CS7 222 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 ZNF714Q96N38 554 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 MED11Q9P086 117 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 LY96Q9Y6Y9 160 aa1.1□□□□□ -2.23
TRAPPC13-204ENST00000438419 A0A087WX48 190 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 IGKV2D-26A0A0A0MRZ7 120 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 ODAMA1E959 279 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 CCDC160A6NGH7 325 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 PGRMC1O00264 195 aaKnown RBP1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 GPR31O00270 319 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 ROMO1P60602 79 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 PLCXD2Q0VAA5 305 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 MSMO1Q15800 293 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 DCUN1D2Q6PH85 259 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 TCEAL4Q96EI5 215 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 RASL12Q9NYN1 266 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 ATPIF1Q9UII2 106 aa1.09□□□□□ -2.23
TRAPPC13-204ENST00000438419 ROS1P08922 2347 aa1.09□□□□□ -2.24
TRAPPC13-204ENST00000438419 KIAA1549LQ6ZVL6 1849 aa1.09□□□□□ -2.24
TRAPPC13-204ENST00000438419 RNF213Q63HN8 5207 aa1.09□□□□□ -2.24
TRAPPC13-204ENST00000438419 USF3Q68DE3 2245 aa1.09□□□□□ -2.24
TRAPPC13-204ENST00000438419 CSMD3Q7Z407 3707 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 HRNRQ86YZ3 2850 aaPredicted RBP1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 TCRBV4S1A1TA0A5B7 111 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 MAP1LC3B2A6NCE7 125 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 B4DSR2 109 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 C1orf140Q5VVS0 124 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 TEX261Q6UWH6 196 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 PATE2Q6UY27 113 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 CROCCP2Q86T23 111 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 OR4K15Q8NH41 348 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 C4orf3Q8WVX3 66 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 RMND5BQ96G75 393 aaPredicted RBP1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 MAP1LC3BQ9GZQ8 125 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 OR52A1Q9UKL2 312 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 U3KQ87 197 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 MUC4Q99102 2169 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 KMT2AQ03164 3969 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 CACNA1CQ13936 2221 aa1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 FLG2Q5D862 2391 aaPredicted RBP1.08□□□□□ -2.24
TRAPPC13-204ENST00000438419 TRBV6-7A0A0A0MS04 114 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 A0A1B0GV72 72 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 ZNF736B4DX44 427 aaPredicted RBP1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 K7ERJ3 54 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 DR1Q01658 176 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 RTL8BQ17RB0 113 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 MYO7BQ6PIF6 2116 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 ST6GALNAC3Q8NDV1 305 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 OR5D16Q8NGK9 328 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 OR5D14Q8NGL3 314 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 CARD19Q96LW7 228 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 ODF3Q96PU9 254 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 RTL8AQ9BWD3 113 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 CENPHQ9H3R5 247 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 CACYBPQ9HB71 228 aaKnown RBP1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 GINS2Q9Y248 185 aa1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 CHCHD2Q9Y6H1 151 aaPredicted RBP1.07□□□□□ -2.24
TRAPPC13-204ENST00000438419 TRAV5A0A0B4J249 113 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 C17orf112F2Z3M2 114 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 OR10J4P0C629 311 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 KRTAP10-4P60372 401 aaPredicted RBP1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 TMEM78Q5T7P6 136 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 C4orf22Q6V702 233 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 POP5Q969H6 163 aaKnown RBP1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 CHCHD1Q96BP2 118 aaKnown RBP1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 CDC42SE1Q9NRR8 79 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 LAMTOR3Q9UHA4 124 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 SMPXQ9UHP9 88 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 RNF11Q9Y3C5 154 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 ASB4Q9Y574 426 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 PLCE1Q9P212 2302 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 FSIP2Q5CZC0 6907 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 ANK1P16157 1881 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 LOC110117498A0A087WWA1 95 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 E7EUB6 86 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 M0R233 179 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 RER1O15258 196 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 HIST1H2BKO60814 126 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 PFDN1O60925 122 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 IFNA21P01568 189 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 IGLV1-51P01701 117 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 IFNA4P05014 189 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 CD2P06729 351 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 HIST1H2BJP06899 126 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 DSCR4P56555 118 aaPredicted RBP1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 HBBP68871 147 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 CDK6Q00534 326 aa1.06□□□□□ -2.24
TRAPPC13-204ENST00000438419 KLRD1Q13241 179 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms