RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 FAM223AQ8IWN6 122 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 SLC50A1Q9BRV3 221 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 KLK15Q9H2R5 256 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 UFC1Q9Y3C8 167 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 BUB3O43684 328 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 PF4V1P10720 104 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 TCTAP57738 103 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 CLEC19AQ6UXS0 136 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 AMN1Q8IY45 258 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 FABP5P3A8MUU1 101 aa11.22□□□□□ -0.61
CD4-202ENST00000437800 TRGV3P03979 118 aa11.22□□□□□ -0.61
CD4-202ENST00000437800 CFAP126Q5VTH2 177 aa11.22□□□□□ -0.61
CD4-202ENST00000437800 AMTNQ6UX39 209 aa11.22□□□□□ -0.61
CD4-202ENST00000437800 ZMAT4Q9H898 229 aa11.22□□□□□ -0.61
CD4-202ENST00000437800 LINC01546A6NGU7 62 aa11.21□□□□□ -0.61
CD4-202ENST00000437800 ZNF80P51504 273 aaPredicted RBP11.21□□□□□ -0.61
CD4-202ENST00000437800 LINC01559Q495D7 138 aa11.21□□□□□ -0.61
CD4-202ENST00000437800 ZNF575Q86XF7 245 aa11.21□□□□□ -0.61
CD4-202ENST00000437800 MRPL53Q96EL3 112 aaKnown RBP11.21□□□□□ -0.61
CD4-202ENST00000437800 TMSB15BA0A087X1C1 80 aa11.21□□□□□ -0.62
CD4-202ENST00000437800 IGHV3-35A0A0C4DH35 117 aa11.21□□□□□ -0.62
CD4-202ENST00000437800 FAM106AQ4KMX7 169 aa11.21□□□□□ -0.62
CD4-202ENST00000437800 HIST2H2BDQ6DRA6 164 aa11.21□□□□□ -0.62
CD4-202ENST00000437800 EVI2AP22794 236 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 PPDPFLQ8WWR9 84 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 GAGE12JA6NER3 117 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 TMEM262E9PQX1 116 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 GAGE7O76087 117 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 GAGE12FP0CL80 117 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 GAGE12GP0CL81 117 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 GAGE12IP0CL82 117 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 PSMB8P28062 276 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 CKS2P33552 79 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 ARL3P36405 182 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 GAGE4Q13068 117 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 TWIST1Q15672 202 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 LINC01006Q8NI28 216 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 Q8TAT8 98 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 USMG5Q96IX5 58 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 DKK2Q9UBU2 259 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 HHLA3Q9XRX5 114 aa11.2□□□□□ -0.62
CD4-202ENST00000437800 IGKV2D-26A0A0A0MRZ7 120 aa11.19□□□□□ -0.62
CD4-202ENST00000437800 CLPSL1A2RUU4 121 aa11.19□□□□□ -0.62
CD4-202ENST00000437800 IGHV3-11P01762 117 aa11.19□□□□□ -0.62
CD4-202ENST00000437800 FHL3Q13643 280 aa11.19□□□□□ -0.62
CD4-202ENST00000437800 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.19□□□□□ -0.62
CD4-202ENST00000437800 SMIM20Q8N5G0 67 aa11.19□□□□□ -0.62
CD4-202ENST00000437800 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
CD4-202ENST00000437800 IGHV3OR16-8A0A075B7F1 116 aa11.18□□□□□ -0.62
CD4-202ENST00000437800 HLA-DMBP28068 263 aa11.18□□□□□ -0.62
CD4-202ENST00000437800 NFE4Q86UQ8 179 aa11.18□□□□□ -0.62
CD4-202ENST00000437800 LOC389332A0A1B0GUA5 103 aa11.18□□□□□ -0.62
CD4-202ENST00000437800 PRSS29PA6NIE9 313 aa11.18□□□□□ -0.62
CD4-202ENST00000437800 LINC01619G3V211 115 aa11.18□□□□□ -0.62
CD4-202ENST00000437800 NPYP01303 97 aa11.18□□□□□ -0.62
CD4-202ENST00000437800 PRB4P10163 310 aaPredicted RBP11.18□□□□□ -0.62
CD4-202ENST00000437800 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
CD4-202ENST00000437800 C16orf95Q9H693 158 aa11.18□□□□□ -0.62
CD4-202ENST00000437800 NDUFA7O95182 113 aa11.17□□□□□ -0.62
CD4-202ENST00000437800 TRBV12-3P01733 135 aa11.17□□□□□ -0.62
CD4-202ENST00000437800 NHLRC4P0CG21 123 aaPredicted RBP11.17□□□□□ -0.62
CD4-202ENST00000437800 TMEM158Q8WZ71 300 aa11.17□□□□□ -0.62
CD4-202ENST00000437800 CITED1Q99966 193 aa11.17□□□□□ -0.62
CD4-202ENST00000437800 U3KQE9 123 aa11.17□□□□□ -0.62
CD4-202ENST00000437800 J3KRW8 73 aa11.17□□□□□ -0.62
CD4-202ENST00000437800 IGKCP01834 107 aa11.17□□□□□ -0.62
CD4-202ENST00000437800 ORM1P02763 201 aa11.17□□□□□ -0.62
CD4-202ENST00000437800 SMCPP49901 116 aaPredicted RBP11.17□□□□□ -0.62
CD4-202ENST00000437800 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.17□□□□□ -0.62
CD4-202ENST00000437800 MAP1LC3AQ9H492 121 aa11.17□□□□□ -0.62
CD4-202ENST00000437800 FBN1P35555 2871 aaKnown RBP11.16□□□□□ -0.62
CD4-202ENST00000437800 RHODO00212 210 aa11.16□□□□□ -0.62
CD4-202ENST00000437800 ODF1Q14990 250 aa11.16□□□□□ -0.62
CD4-202ENST00000437800 TEN1Q86WV5 123 aa11.16□□□□□ -0.62
CD4-202ENST00000437800 C11orf44Q8N8P7 122 aa11.16□□□□□ -0.62
CD4-202ENST00000437800 NXT2Q9NPJ8 142 aaKnown RBP11.16□□□□□ -0.62
CD4-202ENST00000437800 IGFL4Q6B9Z1 124 aa11.15□□□□□ -0.62
CD4-202ENST00000437800 METTL26Q96S19 204 aa11.15□□□□□ -0.62
CD4-202ENST00000437800 PRAC2D3DTV9 90 aa11.15□□□□□ -0.62
CD4-202ENST00000437800 ELANEP08246 267 aa11.15□□□□□ -0.62
CD4-202ENST00000437800 KHDC1LQ5JSQ8 128 aa11.15□□□□□ -0.62
CD4-202ENST00000437800 GLMPQ8WWB7 406 aa11.15□□□□□ -0.62
CD4-202ENST00000437800 TMEM89A2RUT3 159 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 ZNF688P0C7X2 276 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 ERCC8Q13216 396 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 LYRM7Q5U5X0 104 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 C9orf47Q6ZRZ4 202 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 C18orf65Q6ZTR6 163 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 MYOZ3Q8TDC0 251 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 ATP5LO75964 103 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 DPM2O94777 84 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 NDUFV3P56181 108 aaKnown RBP11.14□□□□□ -0.63
CD4-202ENST00000437800 RNF152Q8N8N0 203 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 HIST1H4GQ99525 98 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 TTTY13Q9BZ97 58 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 AGPAT4-IT1Q9H0P7 198 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 LENEPQ9Y5L5 61 aa11.14□□□□□ -0.63
CD4-202ENST00000437800 TRAV8-2A0A0B4J237 113 aa11.13□□□□□ -0.63
CD4-202ENST00000437800 PROK1P58294 105 aa11.13□□□□□ -0.63
CD4-202ENST00000437800 TMEM78Q5T7P6 136 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms