RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 FAM19A3Q7Z5A8 133 aa4.79□□□□□ -1.64
MCF2-205ENST00000437564 RNF185Q96GF1 192 aa4.79□□□□□ -1.64
MCF2-205ENST00000437564 AMELXQ99217 191 aa4.79□□□□□ -1.64
MCF2-205ENST00000437564 C17orf98A8MV24 154 aa4.78□□□□□ -1.64
MCF2-205ENST00000437564 LEPROTO15243 131 aa4.78□□□□□ -1.64
MCF2-205ENST00000437564 TRAV23DV6A0A075B6W5 121 aa4.78□□□□□ -1.64
MCF2-205ENST00000437564 IGHV5-51A0A0C4DH38 117 aa4.78□□□□□ -1.64
MCF2-205ENST00000437564 IGIPA6NJ69 53 aa4.78□□□□□ -1.64
MCF2-205ENST00000437564 CCL4P13236 92 aa4.78□□□□□ -1.64
MCF2-205ENST00000437564 SPINK9Q5DT21 86 aa4.78□□□□□ -1.64
MCF2-205ENST00000437564 ZNF575Q86XF7 245 aa4.78□□□□□ -1.64
MCF2-205ENST00000437564 OBSCN-AS1Q96MR7 158 aa4.78□□□□□ -1.64
MCF2-205ENST00000437564 EPOPA6NHQ4 379 aa4.77□□□□□ -1.65
MCF2-205ENST00000437564 A6NN06 94 aa4.77□□□□□ -1.65
MCF2-205ENST00000437564 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
MCF2-205ENST00000437564 RMI2Q96E14 147 aa4.77□□□□□ -1.65
MCF2-205ENST00000437564 LINC00846Q9NV44 126 aa4.77□□□□□ -1.65
MCF2-205ENST00000437564 IGHV1-69DA0A0B4J2H0 117 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 IGLV2-11P01706 119 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 TRBV12-3P01733 135 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 MED14OSP0DP75 135 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 RNASE4P34096 147 aaKnown RBP4.76□□□□□ -1.65
MCF2-205ENST00000437564 MP68P56378 58 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 ADAMTSL4-AS1Q5T5F5 129 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 IGFL3Q6UXB1 125 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 C14orf178Q8N769 122 aaPredicted RBP4.76□□□□□ -1.65
MCF2-205ENST00000437564 KLF14Q8TD94 323 aaPredicted RBP4.76□□□□□ -1.65
MCF2-205ENST00000437564 COL4A6Q14031 1691 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 FSTL3O95633 263 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 SYCNQ0VAF6 134 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 RSPO4Q2I0M5 234 aaPredicted RBP4.76□□□□□ -1.65
MCF2-205ENST00000437564 C2orf83Q53S99 150 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 PRNTQ86SH4 94 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 LINC00269Q8N2A0 174 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 Q8N6K4 173 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
MCF2-205ENST00000437564 MYO7BQ6PIF6 2116 aa4.75□□□□□ -1.65
MCF2-205ENST00000437564 LOC100131303A0A0U1RQF7 123 aa4.75□□□□□ -1.65
MCF2-205ENST00000437564 M0R1W7 72 aa4.75□□□□□ -1.65
MCF2-205ENST00000437564 SOCS3O14543 225 aa4.75□□□□□ -1.65
MCF2-205ENST00000437564 GYPEP15421 78 aa4.75□□□□□ -1.65
MCF2-205ENST00000437564 FOLR3P41439 243 aa4.75□□□□□ -1.65
MCF2-205ENST00000437564 BRWD1-AS2P59051 145 aa4.75□□□□□ -1.65
MCF2-205ENST00000437564 KIAA0087Q14695 138 aa4.75□□□□□ -1.65
MCF2-205ENST00000437564 TMEM61Q8N0U2 210 aa4.75□□□□□ -1.65
MCF2-205ENST00000437564 LYPD1Q8N2G4 141 aa4.75□□□□□ -1.65
MCF2-205ENST00000437564 TMEM141Q96I45 108 aa4.75□□□□□ -1.65
MCF2-205ENST00000437564 A0A087WZ39 114 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 hDV103S1A0JD37 113 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 S100A4P26447 101 aaKnown RBP4.74□□□□□ -1.65
MCF2-205ENST00000437564 LINC00205P59089 165 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 IGKV1OR2-108A0A075B7D4 117 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 A0A0J9YXY3 114 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 H0Y9J4 135 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 BUB1B-PAK6H3BSN5 160 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 Q6ZRP5 223 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 Q6ZTC4 211 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 GPHB5Q86YW7 130 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 LINC01356Q8N9X3 169 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 TMEM14BQ9NUH8 114 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 TMEM14CQ9P0S9 112 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 SNURFQ9Y675 71 aa4.74□□□□□ -1.65
MCF2-205ENST00000437564 CEP192Q8TEP8 1941 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 IGLV4-69A0A075B6H9 119 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 TRBV7-4A0A0J9YYF1 115 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 KLLNB2CW77 178 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 NTN3O00634 580 aaPredicted RBP4.73□□□□□ -1.65
MCF2-205ENST00000437564 LINC00313P59037 77 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 MIAQ16674 131 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 LINC01554Q52M75 96 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 SMIM2Q9BVW6 85 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 CYP4F30PQ9H0H9 118 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 C22orf24Q9Y442 160 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 SPAG17Q6Q759 2223 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 TRAV22A0A0B4J277 110 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 IGHV5-10-1A0A0J9YXX1 117 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 PPP1R17O96001 155 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 STATHP02808 62 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 TSPEAR-AS2P59090 65 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 LPAL2Q16609 132 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 DEFB134Q4QY38 66 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 PIK3CD-AS1Q5SR53 167 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 PATE2Q6UY27 113 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 SMAD5-AS1Q9Y6J3 95 aa4.73□□□□□ -1.65
MCF2-205ENST00000437564 NACAE9PAV3 2078 aa4.72□□□□□ -1.65
MCF2-205ENST00000437564 ESPL1Q14674 2120 aa4.72□□□□□ -1.65
MCF2-205ENST00000437564 CRIP1P50238 77 aa4.72□□□□□ -1.65
MCF2-205ENST00000437564 C10orf128Q5T292 105 aa4.72□□□□□ -1.65
MCF2-205ENST00000437564 COL4A5P29400 1685 aa4.72□□□□□ -1.65
MCF2-205ENST00000437564 FER1L5A0AVI2 2057 aa4.72□□□□□ -1.65
MCF2-205ENST00000437564 C2orf66Q6UXQ4 117 aa4.71□□□□□ -1.66
MCF2-205ENST00000437564 TMEM254Q8TBM7 123 aa4.71□□□□□ -1.66
MCF2-205ENST00000437564 UBL5Q9BZL1 73 aa4.71□□□□□ -1.66
MCF2-205ENST00000437564 ALPK2Q86TB3 2170 aa4.71□□□□□ -1.66
MCF2-205ENST00000437564 LRRK1Q38SD2 2015 aa4.71□□□□□ -1.66
MCF2-205ENST00000437564 EGR2P11161 476 aaPredicted RBP4.71□□□□□ -1.66
MCF2-205ENST00000437564 IGLV3-21P80748 117 aaPredicted RBP4.71□□□□□ -1.66
MCF2-205ENST00000437564 HOXA4Q00056 320 aaPredicted RBP4.71□□□□□ -1.66
MCF2-205ENST00000437564 PRCDQ00LT1 54 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms