RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 TOR2AQ5JU69 321 aa11.78□□□□□ -0.52
SBDSP1-203ENST00000437201 FAM74A4Q5TZK3 123 aa11.78□□□□□ -0.52
SBDSP1-203ENST00000437201 SFRP2Q96HF1 295 aa11.78□□□□□ -0.52
SBDSP1-203ENST00000437201 SAMD10Q9BYL1 202 aa11.78□□□□□ -0.52
SBDSP1-203ENST00000437201 JPT2Q9H910 190 aa11.78□□□□□ -0.52
SBDSP1-203ENST00000437201 Q9HAA7 133 aa11.78□□□□□ -0.52
SBDSP1-203ENST00000437201 TMSB15BA0A087X1C1 80 aa11.77□□□□□ -0.53
SBDSP1-203ENST00000437201 M0R381 172 aa11.77□□□□□ -0.53
SBDSP1-203ENST00000437201 GCSHP23434 173 aa11.77□□□□□ -0.53
SBDSP1-203ENST00000437201 NTN5Q8WTR8 489 aaPredicted RBP11.77□□□□□ -0.53
SBDSP1-203ENST00000437201 DNAH5Q8TE73 4624 aa11.76□□□□□ -0.53
SBDSP1-203ENST00000437201 TRAV8-3A0A0A6YYJ7 113 aa11.76□□□□□ -0.53
SBDSP1-203ENST00000437201 FUSP35637 526 aaKnown RBP eCLIP11.76□□□□□ -0.53
SBDSP1-203ENST00000437201 BAGE2Q86Y30 109 aa11.76□□□□□ -0.53
SBDSP1-203ENST00000437201 C14orf178Q8N769 122 aaPredicted RBP11.76□□□□□ -0.53
SBDSP1-203ENST00000437201 TRBV10-1A0A0K0K1A3 114 aa11.75□□□□□ -0.53
SBDSP1-203ENST00000437201 A0A1B0GV50 99 aa11.75□□□□□ -0.53
SBDSP1-203ENST00000437201 EIF5AL1Q6IS14 154 aaKnown RBP11.75□□□□□ -0.53
SBDSP1-203ENST00000437201 URGCP-MRPS24S4R325 110 aa11.75□□□□□ -0.53
SBDSP1-203ENST00000437201 A0A087WWL8 130 aa11.74□□□□□ -0.53
SBDSP1-203ENST00000437201 IGLV5-52A0A0A0MRZ9 124 aa11.74□□□□□ -0.53
SBDSP1-203ENST00000437201 SCO2A0A1W2PP80 73 aa11.74□□□□□ -0.53
SBDSP1-203ENST00000437201 LRCOL1A6NCL2 159 aa11.74□□□□□ -0.53
SBDSP1-203ENST00000437201 TEX46H3BTG2 121 aa11.74□□□□□ -0.53
SBDSP1-203ENST00000437201 CXCL1P09341 107 aa11.74□□□□□ -0.53
SBDSP1-203ENST00000437201 TMUB2Q71RG4 321 aa11.74□□□□□ -0.53
SBDSP1-203ENST00000437201 COX11Q9Y6N1 276 aa11.74□□□□□ -0.53
SBDSP1-203ENST00000437201 ABCA13Q86UQ4 5058 aa11.74□□□□□ -0.53
SBDSP1-203ENST00000437201 EPM2AB3EWF7 344 aa11.73□□□□□ -0.53
SBDSP1-203ENST00000437201 RAB5CP51148 216 aa11.73□□□□□ -0.53
SBDSP1-203ENST00000437201 KRTAP10-1P60331 282 aa11.73□□□□□ -0.53
SBDSP1-203ENST00000437201 RPL36AP83881 106 aaKnown RBP11.73□□□□□ -0.53
SBDSP1-203ENST00000437201 RPL36ALQ969Q0 106 aaKnown RBP11.73□□□□□ -0.53
SBDSP1-203ENST00000437201 MLST8Q9BVC4 326 aa11.73□□□□□ -0.53
SBDSP1-203ENST00000437201 MANBALQ9NQG1 85 aa11.73□□□□□ -0.53
SBDSP1-203ENST00000437201 KCNIP4Q6PIL6 250 aa11.72□□□□□ -0.53
SBDSP1-203ENST00000437201 Q8N814 137 aa11.72□□□□□ -0.53
SBDSP1-203ENST00000437201 RMI2Q96E14 147 aa11.72□□□□□ -0.53
SBDSP1-203ENST00000437201 Q9UF83 564 aa11.72□□□□□ -0.53
SBDSP1-203ENST00000437201 XGP55808 180 aa11.71□□□□□ -0.53
SBDSP1-203ENST00000437201 RAB4BP61018 213 aa11.71□□□□□ -0.53
SBDSP1-203ENST00000437201 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.71□□□□□ -0.53
SBDSP1-203ENST00000437201 APOBP04114 4563 aaKnown RBP11.71□□□□□ -0.54
SBDSP1-203ENST00000437201 TRBV7-3A0A075B6L6 115 aa11.7□□□□□ -0.54
SBDSP1-203ENST00000437201 TRAV1-1A0A0B4J248 108 aa11.7□□□□□ -0.54
SBDSP1-203ENST00000437201 OR5AL1P0C617 328 aa11.7□□□□□ -0.54
SBDSP1-203ENST00000437201 ELOBQ15370 118 aa11.7□□□□□ -0.54
SBDSP1-203ENST00000437201 DAZ4Q86SG3 579 aaKnown RBP11.7□□□□□ -0.54
SBDSP1-203ENST00000437201 CHCHD7Q9BUK0 85 aa11.7□□□□□ -0.54
SBDSP1-203ENST00000437201 DAZ3Q9NR90 486 aaKnown RBP11.7□□□□□ -0.54
SBDSP1-203ENST00000437201 A0A087WX48 190 aa11.69□□□□□ -0.54
SBDSP1-203ENST00000437201 RPL35P42766 123 aaKnown RBP11.69□□□□□ -0.54
SBDSP1-203ENST00000437201 SPANXN1Q5VSR9 72 aa11.69□□□□□ -0.54
SBDSP1-203ENST00000437201 PRR27Q6MZM9 219 aa11.69□□□□□ -0.54
SBDSP1-203ENST00000437201 FRZBQ92765 325 aa11.69□□□□□ -0.54
SBDSP1-203ENST00000437201 TMEM70Q9BUB7 260 aa11.69□□□□□ -0.54
SBDSP1-203ENST00000437201 SSBP4Q9BWG4 385 aaPredicted RBP11.69□□□□□ -0.54
SBDSP1-203ENST00000437201 GNG13Q9P2W3 67 aa11.69□□□□□ -0.54
SBDSP1-203ENST00000437201 SNAI2O43623 268 aa11.68□□□□□ -0.54
SBDSP1-203ENST00000437201 UBE2D3P61077 147 aa11.68□□□□□ -0.54
SBDSP1-203ENST00000437201 UBE2D2P62837 147 aa11.68□□□□□ -0.54
SBDSP1-203ENST00000437201 RPL19P84098 196 aaKnown RBP11.68□□□□□ -0.54
SBDSP1-203ENST00000437201 ZNF56Q15929 161 aa11.68□□□□□ -0.54
SBDSP1-203ENST00000437201 NIT1Q86X76 327 aa11.68□□□□□ -0.54
SBDSP1-203ENST00000437201 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
SBDSP1-203ENST00000437201 OR10AG1Q8NH19 301 aa11.68□□□□□ -0.54
SBDSP1-203ENST00000437201 SMIM17P0DL12 118 aa11.67□□□□□ -0.54
SBDSP1-203ENST00000437201 Q8N3U1 123 aa11.67□□□□□ -0.54
SBDSP1-203ENST00000437201 C11orf52Q96A22 123 aa11.67□□□□□ -0.54
SBDSP1-203ENST00000437201 DAZAP1Q96EP5 407 aaKnown RBP11.67□□□□□ -0.54
SBDSP1-203ENST00000437201 F5H697 171 aa11.65□□□□□ -0.54
SBDSP1-203ENST00000437201 PDE6DO43924 150 aa11.65□□□□□ -0.54
SBDSP1-203ENST00000437201 IFNA1P01562 189 aa11.65□□□□□ -0.54
SBDSP1-203ENST00000437201 C1QBP02746 253 aa11.65□□□□□ -0.54
SBDSP1-203ENST00000437201 RPS20P60866 119 aaKnown RBP11.65□□□□□ -0.54
SBDSP1-203ENST00000437201 PKIAP61925 76 aa11.65□□□□□ -0.54
SBDSP1-203ENST00000437201 CCL20P78556 96 aa11.65□□□□□ -0.54
SBDSP1-203ENST00000437201 SMIM12Q96EX1 92 aa11.65□□□□□ -0.54
SBDSP1-203ENST00000437201 SULT1A2P50226 295 aa11.64□□□□□ -0.55
SBDSP1-203ENST00000437201 Q0VG73 95 aa11.64□□□□□ -0.55
SBDSP1-203ENST00000437201 TMEM97Q5BJF2 176 aa11.64□□□□□ -0.55
SBDSP1-203ENST00000437201 TCTE3Q8IZS6 198 aa11.64□□□□□ -0.55
SBDSP1-203ENST00000437201 AP1S3Q96PC3 154 aa11.64□□□□□ -0.55
SBDSP1-203ENST00000437201 BIN3Q9NQY0 253 aa11.64□□□□□ -0.55
SBDSP1-203ENST00000437201 KLK12Q9UKR0 248 aa11.64□□□□□ -0.55
SBDSP1-203ENST00000437201 TRBV6-8A0A0A6YYG3 113 aa11.63□□□□□ -0.55
SBDSP1-203ENST00000437201 XKRY2A2RUG3 117 aa11.63□□□□□ -0.55
SBDSP1-203ENST00000437201 TMEM262E9PQX1 116 aa11.63□□□□□ -0.55
SBDSP1-203ENST00000437201 FAM229AH3BQW9 127 aa11.63□□□□□ -0.55
SBDSP1-203ENST00000437201 GNG4P50150 75 aa11.63□□□□□ -0.55
SBDSP1-203ENST00000437201 MEF2BQ02080 365 aaPredicted RBP11.63□□□□□ -0.55
SBDSP1-203ENST00000437201 CENPWQ5EE01 88 aa11.63□□□□□ -0.55
SBDSP1-203ENST00000437201 Q5VSD8 79 aa11.63□□□□□ -0.55
SBDSP1-203ENST00000437201 Q8N976 141 aa11.63□□□□□ -0.55
SBDSP1-203ENST00000437201 NEXN-AS1Q8NBZ9 246 aa11.63□□□□□ -0.55
SBDSP1-203ENST00000437201 DERL1Q9BUN8 251 aa11.63□□□□□ -0.55
SBDSP1-203ENST00000437201 IGKV2D-24A0A075B6R9 120 aa11.62□□□□□ -0.55
SBDSP1-203ENST00000437201 MUC21A0A0G2JKD1 596 aa11.62□□□□□ -0.55
SBDSP1-203ENST00000437201 MUC21A0A140T8X8 626 aa11.62□□□□□ -0.55
SBDSP1-203ENST00000437201 RBFOX3A6NFN3 312 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms