RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 TNFSF18Q9UNG2 199 aa7.15□□□□□ -1.26
SPTLC1P4-201ENST00000435997 FABP5P3A8MUU1 101 aa7.14□□□□□ -1.27
SPTLC1P4-201ENST00000435997 KRBOX1C9JBD0 128 aa7.14□□□□□ -1.27
SPTLC1P4-201ENST00000435997 SEC11BP0C7V7 166 aa7.14□□□□□ -1.27
SPTLC1P4-201ENST00000435997 S100A4P26447 101 aaKnown RBP7.14□□□□□ -1.27
SPTLC1P4-201ENST00000435997 DEFA1P59665 94 aa7.14□□□□□ -1.27
SPTLC1P4-201ENST00000435997 DEFA3P59666 94 aa7.14□□□□□ -1.27
SPTLC1P4-201ENST00000435997 ZNF726P1Q15940 193 aa7.14□□□□□ -1.27
SPTLC1P4-201ENST00000435997 LGALSLQ3ZCW2 172 aaPredicted RBP7.14□□□□□ -1.27
SPTLC1P4-201ENST00000435997 CIRBP-AS1Q8TBR5 109 aa7.14□□□□□ -1.27
SPTLC1P4-201ENST00000435997 ZC2HC1AQ96GY0 325 aa7.14□□□□□ -1.27
SPTLC1P4-201ENST00000435997 TRBV10-1A0A0K0K1A3 114 aa7.13□□□□□ -1.27
SPTLC1P4-201ENST00000435997 PEX7O00628 323 aa7.13□□□□□ -1.27
SPTLC1P4-201ENST00000435997 ACTR3CQ9C0K3 210 aaPredicted RBP7.13□□□□□ -1.27
SPTLC1P4-201ENST00000435997 KLK12Q9UKR0 248 aa7.13□□□□□ -1.27
SPTLC1P4-201ENST00000435997 ALG5Q9Y673 324 aa7.13□□□□□ -1.27
SPTLC1P4-201ENST00000435997 IGKV2D-24A0A075B6R9 120 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 RBFOX3A6NFN3 312 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 A6NHS1 94 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 FAM74A7A6NL05 159 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 B4DEV8 164 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 SH2D1AO60880 128 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 OXTP01178 125 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 IGLV2-8P01709 118 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 ARMS2P0C7Q2 107 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 UBE2D3P61077 147 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 UBE2D2P62837 147 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 LINC01559Q495D7 138 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 SERTAD4-AS1Q5TG53 156 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 SYT8Q8NBV8 401 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 OR11H4Q8NGC9 324 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 HIST1H2BAQ96A08 127 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 UBE2WQ96B02 151 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 SFRP2Q96HF1 295 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 URGCP-MRPS24S4R325 110 aa7.12□□□□□ -1.27
SPTLC1P4-201ENST00000435997 A0A087WWL8 130 aa7.11□□□□□ -1.27
SPTLC1P4-201ENST00000435997 CTXND1A0A1B0GTU2 59 aa7.11□□□□□ -1.27
SPTLC1P4-201ENST00000435997 M0R036 132 aa7.11□□□□□ -1.27
SPTLC1P4-201ENST00000435997 ZNF674Q2M3X9 581 aa7.11□□□□□ -1.27
SPTLC1P4-201ENST00000435997 Q5BKY6 102 aa7.11□□□□□ -1.27
SPTLC1P4-201ENST00000435997 FAM74A4Q5TZK3 123 aa7.11□□□□□ -1.27
SPTLC1P4-201ENST00000435997 OR10G8Q8NGN5 311 aa7.11□□□□□ -1.27
SPTLC1P4-201ENST00000435997 TRBV7-3A0A075B6L6 115 aa7.1□□□□□ -1.27
SPTLC1P4-201ENST00000435997 TRBV6-1A0A0K0K1D8 114 aa7.1□□□□□ -1.27
SPTLC1P4-201ENST00000435997 Q0VG73 95 aa7.1□□□□□ -1.27
SPTLC1P4-201ENST00000435997 ELOBQ15370 118 aa7.1□□□□□ -1.27
SPTLC1P4-201ENST00000435997 FAM162BQ5T6X4 162 aa7.1□□□□□ -1.27
SPTLC1P4-201ENST00000435997 RPL7L1Q6DKI1 246 aaKnown RBP7.1□□□□□ -1.27
SPTLC1P4-201ENST00000435997 NKX6-2Q9C056 277 aaPredicted RBP7.1□□□□□ -1.27
SPTLC1P4-201ENST00000435997 ZFP30Q9Y2G7 519 aa7.1□□□□□ -1.27
SPTLC1P4-201ENST00000435997 A0A087WX48 190 aa7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 TRBV6-8A0A0A6YYG3 113 aa7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 LTAP01374 205 aa7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 IFNA7P01567 189 aa7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 UBE2G2P60604 165 aa7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 RPL36AP83881 106 aaKnown RBP7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 PRR27Q6MZM9 219 aa7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 ENHOQ6UWT2 76 aa7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 ZFP82Q8N141 532 aa7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 RPL36ALQ969Q0 106 aaKnown RBP7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 FMC1Q96HJ9 113 aa7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 TCEAL7Q9BRU2 100 aa7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 PHLDA3Q9Y5J5 127 aa7.09□□□□□ -1.27
SPTLC1P4-201ENST00000435997 GRIFINA4D1Z8 144 aa7.08□□□□□ -1.28
SPTLC1P4-201ENST00000435997 M0R381 172 aa7.08□□□□□ -1.28
SPTLC1P4-201ENST00000435997 GIPP09681 153 aaPredicted RBP7.08□□□□□ -1.28
SPTLC1P4-201ENST00000435997 TPT1P13693 172 aaKnown RBP7.08□□□□□ -1.28
SPTLC1P4-201ENST00000435997 C14orf177Q52M58 125 aa7.08□□□□□ -1.28
SPTLC1P4-201ENST00000435997 MPV17L2Q567V2 206 aa7.08□□□□□ -1.28
SPTLC1P4-201ENST00000435997 C1orf43Q9BWL3 253 aa7.08□□□□□ -1.28
SPTLC1P4-201ENST00000435997 HMCN2Q8NDA2 5059 aa7.08□□□□□ -1.28
SPTLC1P4-201ENST00000435997 FAT3Q8TDW7 4589 aa7.07□□□□□ -1.28
SPTLC1P4-201ENST00000435997 G3V3Q6 166 aa7.07□□□□□ -1.28
SPTLC1P4-201ENST00000435997 FHITP49789 147 aa7.07□□□□□ -1.28
SPTLC1P4-201ENST00000435997 HNRNPA3P51991 378 aaKnown RBP7.07□□□□□ -1.28
SPTLC1P4-201ENST00000435997 NEXN-AS1Q8NBZ9 246 aa7.07□□□□□ -1.28
SPTLC1P4-201ENST00000435997 BORCS7-ASMTA0A0B4J1R7 106 aa7.06□□□□□ -1.28
SPTLC1P4-201ENST00000435997 PTTG1O95997 202 aa7.06□□□□□ -1.28
SPTLC1P4-201ENST00000435997 CXCL1P09341 107 aa7.06□□□□□ -1.28
SPTLC1P4-201ENST00000435997 RAB4BP61018 213 aa7.06□□□□□ -1.28
SPTLC1P4-201ENST00000435997 KRTAP26-1Q6PEX3 210 aa7.06□□□□□ -1.28
SPTLC1P4-201ENST00000435997 KCNIP4Q6PIL6 250 aa7.06□□□□□ -1.28
SPTLC1P4-201ENST00000435997 INO80EQ8NBZ0 244 aaPredicted RBP7.06□□□□□ -1.28
SPTLC1P4-201ENST00000435997 DAZAP1Q96EP5 407 aaKnown RBP7.06□□□□□ -1.28
SPTLC1P4-201ENST00000435997 MED28Q9H204 178 aa7.06□□□□□ -1.28
SPTLC1P4-201ENST00000435997 PRR34Q9NV39 138 aa7.06□□□□□ -1.28
SPTLC1P4-201ENST00000435997 TMSB15BA0A087X1C1 80 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 MAP1LC3B2A6NCE7 125 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 USP17L23D6RBM5 183 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 SNAI2O43623 268 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 CRPP02741 224 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 PRSS1P07477 247 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 RPL37AP61513 92 aaKnown RBP7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 UBE2G1P62253 170 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 MIAQ16674 131 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 AKR1C8PQ5T2L2 129 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 C15orf54Q8N8G6 183 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 OR10AG1Q8NH19 301 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 SSBP4Q9BWG4 385 aaPredicted RBP7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 MAP1LC3BQ9GZQ8 125 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms