RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 Q8N8P6 123 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 M0QXV9 152 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 BRI3O95415 125 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 AVPP01185 164 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 CRIP2P52943 208 aaPredicted RBP7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 RPL11P62913 178 aaKnown RBP7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 TMEM8BA6NDV4 472 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 IFITM1P13164 125 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 C10orf105Q8TEF2 133 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 M0R381 172 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 DPM2O94777 84 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 ZNF688P0C7X2 276 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 PF4V1P10720 104 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 C9orf139Q6ZV77 190 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 ZMAT4Q9H898 229 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 MXRA5Q9NR99 2828 aa7.87□□□□□ -1.15
CLSTN1-203ENST00000435891 NDUFV3P56181 108 aaKnown RBP7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 FHL3Q13643 280 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 NRGNQ92686 78 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 CCL19Q99731 98 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 TMEM262E9PQX1 116 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 IGHG2P01859 326 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 ZFP2Q6ZN57 461 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 PHLDA1Q8WV24 401 aaPredicted RBP7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 PIMREGQ9BSJ6 248 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 CUBNO60494 3623 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 SORL1Q92673 2214 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 ACACBO00763 2458 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 NDUFA4O00483 81 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 PPDPFQ9H3Y8 114 aa7.86□□□□□ -1.15
CLSTN1-203ENST00000435891 IGHV4-4A0A075B6R2 117 aa7.85□□□□□ -1.15
CLSTN1-203ENST00000435891 A6NDX4 124 aa7.85□□□□□ -1.15
CLSTN1-203ENST00000435891 GNRH2O43555 120 aa7.85□□□□□ -1.15
CLSTN1-203ENST00000435891 MAPKAPK5-AS1Q8N8E1 139 aa7.85□□□□□ -1.15
CLSTN1-203ENST00000435891 MRPL35Q9NZE8 188 aaKnown RBP7.85□□□□□ -1.15
CLSTN1-203ENST00000435891 MUC4Q99102 2169 aa7.85□□□□□ -1.15
CLSTN1-203ENST00000435891 CREBBPQ92793 2442 aa7.85□□□□□ -1.15
CLSTN1-203ENST00000435891 C14orf178Q8N769 122 aaPredicted RBP7.85□□□□□ -1.15
CLSTN1-203ENST00000435891 RPL39LQ96EH5 51 aaKnown RBP7.85□□□□□ -1.15
CLSTN1-203ENST00000435891 HIGD1BQ9P298 99 aa7.85□□□□□ -1.15
CLSTN1-203ENST00000435891 TNFRSF18Q9Y5U5 241 aa7.85□□□□□ -1.15
CLSTN1-203ENST00000435891 RNASE4P34096 147 aaKnown RBP7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 EMP1P54849 157 aa7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 LAGE3Q14657 143 aa7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 C10orf99Q6UWK7 81 aa7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 FAM208BQ5VWN6 2430 aa7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 MRPL23Q16540 153 aaKnown RBP7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 TEN1Q86WV5 123 aa7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 MYOZ3Q8TDC0 251 aa7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 RHPN1-AS1Q9BWJ2 59 aa7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 TRAV4A0A0B4J268 109 aa7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 OR10J6PQ8NGY7 276 aa7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 DEFB104AQ8WTQ1 72 aa7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 PRO0461Q9UI25 63 aa7.84□□□□□ -1.15
CLSTN1-203ENST00000435891 HLA-DRB4P13762 266 aa7.83□□□□□ -1.16
CLSTN1-203ENST00000435891 LYRM7Q5U5X0 104 aa7.83□□□□□ -1.16
CLSTN1-203ENST00000435891 RASL10AQ92737 203 aa7.83□□□□□ -1.16
CLSTN1-203ENST00000435891 LINC00477Q96M19 166 aa7.83□□□□□ -1.16
CLSTN1-203ENST00000435891 HLA-DRB4X5D2U9 266 aa7.83□□□□□ -1.16
CLSTN1-203ENST00000435891 CFAP126Q5VTH2 177 aa7.83□□□□□ -1.16
CLSTN1-203ENST00000435891 LRRK2Q5S007 2527 aa7.83□□□□□ -1.16
CLSTN1-203ENST00000435891 S100A4P26447 101 aaKnown RBP7.83□□□□□ -1.16
CLSTN1-203ENST00000435891 Q1RN00 199 aa7.83□□□□□ -1.16
CLSTN1-203ENST00000435891 LENEPQ9Y5L5 61 aa7.83□□□□□ -1.16
CLSTN1-203ENST00000435891 MSMBP08118 114 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 RNASE3P12724 160 aaKnown RBP7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 ANKRD29Q8N6D5 301 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 FAM19A4Q96LR4 140 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 SMIM2Q9BVW6 85 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 BEX4Q9NWD9 120 aaPredicted RBP7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 ANKRD17O75179 2603 aaKnown RBP7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 TRAV21A0A0B4J279 112 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 C9JAW5 83 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 RNF223E7ERA6 249 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 IGLV1-40P01703 118 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 SMCPP49901 116 aaPredicted RBP7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 USMG5Q96IX5 58 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 VCX2Q9H322 139 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 OVOL1O14753 267 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 PHLDA3Q9Y5J5 127 aa7.82□□□□□ -1.16
CLSTN1-203ENST00000435891 SRSF1Q07955 248 aaKnown RBP eCLIP7.81□□□□□ -1.16
CLSTN1-203ENST00000435891 ATP5LO75964 103 aa7.81□□□□□ -1.16
CLSTN1-203ENST00000435891 MGPP08493 103 aa7.81□□□□□ -1.16
CLSTN1-203ENST00000435891 NHLRC4P0CG21 123 aaPredicted RBP7.81□□□□□ -1.16
CLSTN1-203ENST00000435891 RAX2Q96IS3 184 aa7.81□□□□□ -1.16
CLSTN1-203ENST00000435891 JPT2Q9H910 190 aa7.81□□□□□ -1.16
CLSTN1-203ENST00000435891 ASIPP42127 132 aa7.81□□□□□ -1.16
CLSTN1-203ENST00000435891 SUMO2P61956 95 aaKnown RBP7.81□□□□□ -1.16
CLSTN1-203ENST00000435891 CFHR3Q02985 330 aa7.81□□□□□ -1.16
CLSTN1-203ENST00000435891 PTPN13Q12923 2485 aa7.8□□□□□ -1.16
CLSTN1-203ENST00000435891 MAPK1IP1LQ8NDC0 245 aa7.8□□□□□ -1.16
CLSTN1-203ENST00000435891 ATP6V0E2Q8NHE4 81 aa7.8□□□□□ -1.16
CLSTN1-203ENST00000435891 DAZ1Q9NQZ3 744 aaKnown RBP7.8□□□□□ -1.16
CLSTN1-203ENST00000435891 VPREB3Q9UKI3 123 aa7.8□□□□□ -1.16
CLSTN1-203ENST00000435891 ABCA12Q86UK0 2595 aa7.8□□□□□ -1.16
CLSTN1-203ENST00000435891 C15orf53Q8NAA6 179 aa7.8□□□□□ -1.16
CLSTN1-203ENST00000435891 A0A087WX48 190 aa7.8□□□□□ -1.16
CLSTN1-203ENST00000435891 CRLF1O75462 422 aa7.8□□□□□ -1.16
CLSTN1-203ENST00000435891 IGHV4-59P01825 116 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms