RNA–Protein interactions for RNA: ENST00000434274.2

LIMS1-209, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 3

Gene LIMS1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-209ENST00000434274 FAM74A4Q5TZK3 123 aa10.04□□□□□ -0.8
LIMS1-209ENST00000434274 NTN5Q8WTR8 489 aaPredicted RBP10.04□□□□□ -0.8
LIMS1-209ENST00000434274 RPL36ALQ969Q0 106 aaKnown RBP10.04□□□□□ -0.8
LIMS1-209ENST00000434274 GNG13Q9P2W3 67 aa10.04□□□□□ -0.8
LIMS1-209ENST00000434274 COX11Q9Y6N1 276 aa10.04□□□□□ -0.8
LIMS1-209ENST00000434274 URGCP-MRPS24S4R325 110 aa10.04□□□□□ -0.8
LIMS1-209ENST00000434274 HERC2O95714 4834 aa10.04□□□□□ -0.8
LIMS1-209ENST00000434274 A0A1B0GV50 99 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 XKRY2A2RUG3 117 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 GRIFINA4D1Z8 144 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 GAGE12JA6NER3 117 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 C1QBP02746 253 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 OR5AL1P0C617 328 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 SULT1A2P50226 295 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 KRTAP10-2P60368 255 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 RPS20P60866 119 aaKnown RBP10.03□□□□□ -0.8
LIMS1-209ENST00000434274 PKIAP61925 76 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 GAGE1Q13065 139 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 GAGE4Q13068 117 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 GAGE5Q13069 117 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 GAGE13Q4V321 117 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 KCNIP4Q6PIL6 250 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 RMI2Q96E14 147 aa10.03□□□□□ -0.8
LIMS1-209ENST00000434274 TMSB15BA0A087X1C1 80 aa10.02□□□□□ -0.81
LIMS1-209ENST00000434274 SNAI2O43623 268 aa10.02□□□□□ -0.81
LIMS1-209ENST00000434274 RPL35P42766 123 aaKnown RBP10.02□□□□□ -0.81
LIMS1-209ENST00000434274 RAB4BP61018 213 aa10.02□□□□□ -0.81
LIMS1-209ENST00000434274 MEF2BQ02080 365 aaPredicted RBP10.02□□□□□ -0.81
LIMS1-209ENST00000434274 KIAA1109Q2LD37 5005 aa10.01□□□□□ -0.81
LIMS1-209ENST00000434274 PKD1P98161 4303 aa10.01□□□□□ -0.81
LIMS1-209ENST00000434274 ELOBQ15370 118 aa10.01□□□□□ -0.81
LIMS1-209ENST00000434274 SPANXN1Q5VSR9 72 aa10.01□□□□□ -0.81
LIMS1-209ENST00000434274 DAZAP1Q96EP5 407 aaKnown RBP10.01□□□□□ -0.81
LIMS1-209ENST00000434274 AP1S3Q96PC3 154 aa10.01□□□□□ -0.81
LIMS1-209ENST00000434274 TRBV7-3A0A075B6L6 115 aa10□□□□□ -0.81
LIMS1-209ENST00000434274 SMIM17P0DL12 118 aa10□□□□□ -0.81
LIMS1-209ENST00000434274 TMEM97Q5BJF2 176 aa10□□□□□ -0.81
LIMS1-209ENST00000434274 Q6ZSN1 163 aa10□□□□□ -0.81
LIMS1-209ENST00000434274 C14orf178Q8N769 122 aaPredicted RBP10□□□□□ -0.81
LIMS1-209ENST00000434274 MAPKAPK5-AS1Q8N8E1 139 aa10□□□□□ -0.81
LIMS1-209ENST00000434274 OR10G8Q8NGN5 311 aa10□□□□□ -0.81
LIMS1-209ENST00000434274 SSBP4Q9BWG4 385 aaPredicted RBP10□□□□□ -0.81
LIMS1-209ENST00000434274 SAMD10Q9BYL1 202 aa10□□□□□ -0.81
LIMS1-209ENST00000434274 JPT2Q9H910 190 aa10□□□□□ -0.81
LIMS1-209ENST00000434274 DNAH11Q96DT5 4516 aa10□□□□□ -0.81
LIMS1-209ENST00000434274 A0A087WWL8 130 aa9.99□□□□□ -0.81
LIMS1-209ENST00000434274 IGHV3-30P01768 117 aa9.99□□□□□ -0.81
LIMS1-209ENST00000434274 IGHV3-33P01772 117 aa9.99□□□□□ -0.81
LIMS1-209ENST00000434274 IGHV3-30-3P0DP02 117 aa9.99□□□□□ -0.81
LIMS1-209ENST00000434274 IGHV3-30-5P0DP03 117 aa9.99□□□□□ -0.81
LIMS1-209ENST00000434274 GNG4P50150 75 aa9.99□□□□□ -0.81
LIMS1-209ENST00000434274 CCL20P78556 96 aa9.99□□□□□ -0.81
LIMS1-209ENST00000434274 ZNF56Q15929 161 aa9.99□□□□□ -0.81
LIMS1-209ENST00000434274 CENPWQ5EE01 88 aa9.99□□□□□ -0.81
LIMS1-209ENST00000434274 PRR27Q6MZM9 219 aa9.99□□□□□ -0.81
LIMS1-209ENST00000434274 AKAP14Q86UN6 197 aa9.99□□□□□ -0.81
LIMS1-209ENST00000434274 BCL2P10415 239 aa9.98□□□□□ -0.81
LIMS1-209ENST00000434274 Q8N1X5 172 aa9.98□□□□□ -0.81
LIMS1-209ENST00000434274 OR10AG1Q8NH19 301 aa9.98□□□□□ -0.81
LIMS1-209ENST00000434274 Q9HAA7 133 aa9.98□□□□□ -0.81
LIMS1-209ENST00000434274 VAX2Q9UIW0 290 aa9.98□□□□□ -0.81
LIMS1-209ENST00000434274 TNFRSF18Q9Y5U5 241 aa9.98□□□□□ -0.81
LIMS1-209ENST00000434274 A0A087WX48 190 aa9.97□□□□□ -0.81
LIMS1-209ENST00000434274 F2Z2F3 143 aa9.97□□□□□ -0.81
LIMS1-209ENST00000434274 H7C1H1 209 aa9.97□□□□□ -0.81
LIMS1-209ENST00000434274 UBE2D3P61077 147 aa9.97□□□□□ -0.81
LIMS1-209ENST00000434274 UBE2D2P62837 147 aa9.97□□□□□ -0.81
LIMS1-209ENST00000434274 CACNG7P62955 275 aa9.97□□□□□ -0.81
LIMS1-209ENST00000434274 Q6ZNX1 250 aa9.97□□□□□ -0.81
LIMS1-209ENST00000434274 P01737 135 aa9.96□□□□□ -0.82
LIMS1-209ENST00000434274 IGLV5-52A0A0A0MRZ9 124 aa9.95□□□□□ -0.82
LIMS1-209ENST00000434274 LRCOL1A6NCL2 159 aa9.95□□□□□ -0.82
LIMS1-209ENST00000434274 RBFOX3A6NFN3 312 aa9.95□□□□□ -0.82
LIMS1-209ENST00000434274 GCSHP23434 173 aa9.95□□□□□ -0.82
LIMS1-209ENST00000434274 RPL19P84098 196 aaKnown RBP9.95□□□□□ -0.82
LIMS1-209ENST00000434274 Q0VG73 95 aa9.95□□□□□ -0.82
LIMS1-209ENST00000434274 DAZ4Q86SG3 579 aaKnown RBP9.95□□□□□ -0.82
LIMS1-209ENST00000434274 NIT1Q86X76 327 aa9.95□□□□□ -0.82
LIMS1-209ENST00000434274 FER1L6-AS1Q8NA97 138 aa9.95□□□□□ -0.82
LIMS1-209ENST00000434274 OR2D3Q8NGH3 330 aa9.95□□□□□ -0.82
LIMS1-209ENST00000434274 DERL1Q9BUN8 251 aa9.95□□□□□ -0.82
LIMS1-209ENST00000434274 DAZ3Q9NR90 486 aaKnown RBP9.95□□□□□ -0.82
LIMS1-209ENST00000434274 MED9Q9NWA0 146 aa9.95□□□□□ -0.82
LIMS1-209ENST00000434274 F5H697 171 aa9.94□□□□□ -0.82
LIMS1-209ENST00000434274 TRGC1P0CF51 173 aa9.94□□□□□ -0.82
LIMS1-209ENST00000434274 BLOC1S1P78537 153 aa9.94□□□□□ -0.82
LIMS1-209ENST00000434274 Q8N814 137 aa9.94□□□□□ -0.82
LIMS1-209ENST00000434274 TMEM70Q9BUB7 260 aa9.94□□□□□ -0.82
LIMS1-209ENST00000434274 TRBV6-8A0A0A6YYG3 113 aa9.93□□□□□ -0.82
LIMS1-209ENST00000434274 C19orf71A6NCJ1 209 aa9.93□□□□□ -0.82
LIMS1-209ENST00000434274 IGLC6P0CF74 106 aa9.93□□□□□ -0.82
LIMS1-209ENST00000434274 DNAJC30Q96LL9 226 aa9.93□□□□□ -0.82
LIMS1-209ENST00000434274 TMEM250H0YL14 139 aa9.92□□□□□ -0.82
LIMS1-209ENST00000434274 WDR73Q6P4I2 378 aa9.92□□□□□ -0.82
LIMS1-209ENST00000434274 NEXN-AS1Q8NBZ9 246 aa9.92□□□□□ -0.82
LIMS1-209ENST00000434274 KRTAP17-1Q9BYP8 105 aa9.92□□□□□ -0.82
LIMS1-209ENST00000434274 NDUFS6O75380 124 aaKnown RBP9.91□□□□□ -0.82
LIMS1-209ENST00000434274 CRPP02741 224 aa9.91□□□□□ -0.82
LIMS1-209ENST00000434274 C9orf62Q8N4C0 152 aa9.91□□□□□ -0.82
LIMS1-209ENST00000434274 TPPP3Q9BW30 176 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms