RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 K7EQD1 137 aa10.78□□□□□ -0.68
TREX1-201ENST00000433541 CACNG7P62955 275 aa10.78□□□□□ -0.68
TREX1-201ENST00000433541 IFITM2Q01629 132 aa10.78□□□□□ -0.68
TREX1-201ENST00000433541 LYZL1Q6UWQ5 148 aa10.78□□□□□ -0.68
TREX1-201ENST00000433541 TRBV6-4A0A1B0GX49 114 aa10.77□□□□□ -0.69
TREX1-201ENST00000433541 A8MWL6 223 aa10.77□□□□□ -0.69
TREX1-201ENST00000433541 F2Z2F3 143 aa10.77□□□□□ -0.69
TREX1-201ENST00000433541 M0R2N4 97 aa10.77□□□□□ -0.69
TREX1-201ENST00000433541 IGLC6P0CF74 106 aa10.77□□□□□ -0.69
TREX1-201ENST00000433541 FAM231DQ6ZW35 169 aa10.77□□□□□ -0.69
TREX1-201ENST00000433541 BORCS7Q96B45 105 aa10.77□□□□□ -0.69
TREX1-201ENST00000433541 SSBP4Q9BWG4 385 aaPredicted RBP10.77□□□□□ -0.69
TREX1-201ENST00000433541 LINC00588Q9Y4M8 146 aa10.77□□□□□ -0.69
TREX1-201ENST00000433541 MGPP08493 103 aa10.76□□□□□ -0.69
TREX1-201ENST00000433541 FAM3BP58499 235 aaPredicted RBP10.76□□□□□ -0.69
TREX1-201ENST00000433541 ESRGQ1W209 222 aa10.76□□□□□ -0.69
TREX1-201ENST00000433541 SH2D6Q7Z4S9 175 aa10.76□□□□□ -0.69
TREX1-201ENST00000433541 C14orf178Q8N769 122 aaPredicted RBP10.76□□□□□ -0.69
TREX1-201ENST00000433541 NXPH4O95158 308 aa10.75□□□□□ -0.69
TREX1-201ENST00000433541 RPL23P62829 140 aaKnown RBP10.75□□□□□ -0.69
TREX1-201ENST00000433541 TWIST1Q15672 202 aa10.75□□□□□ -0.69
TREX1-201ENST00000433541 RYR2Q92736 4967 aa10.75□□□□□ -0.69
TREX1-201ENST00000433541 GAGE12JA6NER3 117 aa10.74□□□□□ -0.69
TREX1-201ENST00000433541 CRYGDP07320 174 aa10.74□□□□□ -0.69
TREX1-201ENST00000433541 TRGC1P0CF51 173 aa10.74□□□□□ -0.69
TREX1-201ENST00000433541 GAGE1Q13065 139 aa10.74□□□□□ -0.69
TREX1-201ENST00000433541 GAGE4Q13068 117 aa10.74□□□□□ -0.69
TREX1-201ENST00000433541 GAGE5Q13069 117 aa10.74□□□□□ -0.69
TREX1-201ENST00000433541 GAGE13Q4V321 117 aa10.74□□□□□ -0.69
TREX1-201ENST00000433541 Q6ZSN1 163 aa10.74□□□□□ -0.69
TREX1-201ENST00000433541 ISOC2Q96AB3 205 aa10.74□□□□□ -0.69
TREX1-201ENST00000433541 PGLYRP4Q96LB8 373 aa10.74□□□□□ -0.69
TREX1-201ENST00000433541 OSTCQ9NRP0 149 aa10.74□□□□□ -0.69
TREX1-201ENST00000433541 MRPS16Q9Y3D3 137 aaKnown RBP10.74□□□□□ -0.69
TREX1-201ENST00000433541 NTF3P20783 257 aa10.73□□□□□ -0.69
TREX1-201ENST00000433541 CTRLP40313 264 aa10.73□□□□□ -0.69
TREX1-201ENST00000433541 CT83Q5H943 113 aa10.73□□□□□ -0.69
TREX1-201ENST00000433541 UFSP1Q6NVU6 142 aa10.73□□□□□ -0.69
TREX1-201ENST00000433541 SMIM15Q7Z3B0 74 aa10.73□□□□□ -0.69
TREX1-201ENST00000433541 OR10G8Q8NGN5 311 aa10.73□□□□□ -0.69
TREX1-201ENST00000433541 MSRB1Q9NZV6 116 aa10.73□□□□□ -0.69
TREX1-201ENST00000433541 HYDINQ4G0P3 5121 aa10.72□□□□□ -0.69
TREX1-201ENST00000433541 DNAH1Q9P2D7 4330 aa10.72□□□□□ -0.69
TREX1-201ENST00000433541 RAB4BP61018 213 aa10.72□□□□□ -0.69
TREX1-201ENST00000433541 LYPD5Q6UWN5 251 aa10.72□□□□□ -0.69
TREX1-201ENST00000433541 ATP6V0E2Q8NHE4 81 aa10.72□□□□□ -0.69
TREX1-201ENST00000433541 SACSQ9NZJ4 4579 aa10.71□□□□□ -0.69
TREX1-201ENST00000433541 RPL36AP83881 106 aaKnown RBP10.71□□□□□ -0.69
TREX1-201ENST00000433541 ZNRF2Q8NHG8 242 aa10.71□□□□□ -0.69
TREX1-201ENST00000433541 TSKUQ8WUA8 353 aa10.71□□□□□ -0.69
TREX1-201ENST00000433541 GTSF1Q8WW33 167 aa10.71□□□□□ -0.69
TREX1-201ENST00000433541 RPL36ALQ969Q0 106 aaKnown RBP10.71□□□□□ -0.69
TREX1-201ENST00000433541 Q9H8V8 135 aa10.71□□□□□ -0.69
TREX1-201ENST00000433541 RYR3Q15413 4870 aa10.71□□□□□ -0.7
TREX1-201ENST00000433541 HIGD1CA8MV81 97 aa10.7□□□□□ -0.7
TREX1-201ENST00000433541 EVI2AP22794 236 aa10.7□□□□□ -0.7
TREX1-201ENST00000433541 COMMD7Q86VX2 200 aa10.7□□□□□ -0.7
TREX1-201ENST00000433541 DPH3P1Q9H4G8 78 aa10.7□□□□□ -0.7
TREX1-201ENST00000433541 SIVA1O15304 175 aa10.69□□□□□ -0.7
TREX1-201ENST00000433541 OR10J3Q5JRS4 329 aa10.69□□□□□ -0.7
TREX1-201ENST00000433541 WDR73Q6P4I2 378 aa10.69□□□□□ -0.7
TREX1-201ENST00000433541 UQCC3Q6UW78 93 aa10.69□□□□□ -0.7
TREX1-201ENST00000433541 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.69□□□□□ -0.7
TREX1-201ENST00000433541 UPK3BQ9BT76 320 aa10.69□□□□□ -0.7
TREX1-201ENST00000433541 GFRA4Q9GZZ7 299 aa10.69□□□□□ -0.7
TREX1-201ENST00000433541 V9GYV3 84 aa10.69□□□□□ -0.7
TREX1-201ENST00000433541 TRAV8-6A0A0B4J262 113 aa10.68□□□□□ -0.7
TREX1-201ENST00000433541 TRBV10-1A0A0K0K1A3 114 aa10.68□□□□□ -0.7
TREX1-201ENST00000433541 H7C1H1 209 aa10.68□□□□□ -0.7
TREX1-201ENST00000433541 TTC32Q5I0X7 151 aa10.68□□□□□ -0.7
TREX1-201ENST00000433541 GTSF1LQ9H1H1 148 aa10.68□□□□□ -0.7
TREX1-201ENST00000433541 NBDYA0A0U1RRE5 68 aa10.67□□□□□ -0.7
TREX1-201ENST00000433541 A0A1B0GUT8 65 aa10.67□□□□□ -0.7
TREX1-201ENST00000433541 F8W036 122 aa10.67□□□□□ -0.7
TREX1-201ENST00000433541 PNRC1Q12796 327 aaPredicted RBP10.67□□□□□ -0.7
TREX1-201ENST00000433541 Q9UF83 564 aa10.67□□□□□ -0.7
TREX1-201ENST00000433541 NAT8BQ9UHF3 227 aa10.67□□□□□ -0.7
TREX1-201ENST00000433541 VPS13DQ5THJ4 4388 aa10.66□□□□□ -0.7
TREX1-201ENST00000433541 TRBV7-3A0A075B6L6 115 aa10.66□□□□□ -0.7
TREX1-201ENST00000433541 FAM231BA6NCW3 169 aa10.66□□□□□ -0.7
TREX1-201ENST00000433541 WFDC10BQ8IUB3 73 aa10.66□□□□□ -0.7
TREX1-201ENST00000433541 CNFNQ9BYD5 112 aa10.66□□□□□ -0.7
TREX1-201ENST00000433541 TNFRSF18Q9Y5U5 241 aa10.66□□□□□ -0.7
TREX1-201ENST00000433541 KIF25-AS1Q9Y6Z4 181 aa10.66□□□□□ -0.7
TREX1-201ENST00000433541 PPP1R2P9O14990 202 aa10.65□□□□□ -0.7
TREX1-201ENST00000433541 RIGQ13278 110 aa10.65□□□□□ -0.7
TREX1-201ENST00000433541 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.7
TREX1-201ENST00000433541 NEXN-AS1Q8NBZ9 246 aa10.65□□□□□ -0.7
TREX1-201ENST00000433541 MT-ND4LP03901 98 aa10.64□□□□□ -0.71
TREX1-201ENST00000433541 LELP1Q5T871 98 aa10.64□□□□□ -0.71
TREX1-201ENST00000433541 C1orf134Q5TEV5 83 aa10.64□□□□□ -0.71
TREX1-201ENST00000433541 NUP35Q8NFH5 326 aa10.64□□□□□ -0.71
TREX1-201ENST00000433541 KMT2AQ03164 3969 aa10.63□□□□□ -0.71
TREX1-201ENST00000433541 TRAV9-2A0A087WT02 112 aa10.63□□□□□ -0.71
TREX1-201ENST00000433541 A0A087WWC5 75 aa10.63□□□□□ -0.71
TREX1-201ENST00000433541 IGHV3-38A0A0C4DH36 116 aa10.63□□□□□ -0.71
TREX1-201ENST00000433541 TMEM218A2RU14 115 aa10.63□□□□□ -0.71
TREX1-201ENST00000433541 FOXA3P55318 350 aaPredicted RBP10.63□□□□□ -0.71
TREX1-201ENST00000433541 TIRAPP58753 221 aa10.63□□□□□ -0.71
TREX1-201ENST00000433541 RASL11AQ6T310 242 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms