RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 MRPL51Q4U2R6 128 aaKnown RBP13.11□□□□□ -0.31
HMGN1-206ENST00000431390 C14orf178Q8N769 122 aaPredicted RBP13.11□□□□□ -0.31
HMGN1-206ENST00000431390 SMIM17P0DL12 118 aa13.1□□□□□ -0.31
HMGN1-206ENST00000431390 SRIP30626 198 aa13.1□□□□□ -0.31
HMGN1-206ENST00000431390 LGALS9BQ3B8N2 356 aa13.1□□□□□ -0.31
HMGN1-206ENST00000431390 RASL10AQ92737 203 aa13.1□□□□□ -0.31
HMGN1-206ENST00000431390 OVOL2Q9BRP0 275 aa13.1□□□□□ -0.31
HMGN1-206ENST00000431390 ALKBH7Q9BT30 221 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-206ENST00000431390 KIF25-AS1Q9Y6Z4 181 aa13.1□□□□□ -0.31
HMGN1-206ENST00000431390 A8MWV9 139 aa13.09□□□□□ -0.31
HMGN1-206ENST00000431390 OR11H2Q8NH07 326 aa13.09□□□□□ -0.31
HMGN1-206ENST00000431390 JPT2Q9H910 190 aa13.09□□□□□ -0.31
HMGN1-206ENST00000431390 TP53TG1Q9Y2A0 90 aa13.09□□□□□ -0.31
HMGN1-206ENST00000431390 U3KQK5 164 aa13.09□□□□□ -0.31
HMGN1-206ENST00000431390 PPBPP02775 128 aa13.08□□□□□ -0.32
HMGN1-206ENST00000431390 POM121L12Q8N7R1 296 aa13.08□□□□□ -0.32
HMGN1-206ENST00000431390 WWC2-AS2Q96NR7 200 aa13.08□□□□□ -0.32
HMGN1-206ENST00000431390 MRPL16Q9NX20 251 aaKnown RBP13.08□□□□□ -0.32
HMGN1-206ENST00000431390 MIFP14174 115 aa13.07□□□□□ -0.32
HMGN1-206ENST00000431390 ORMDL3Q8N138 153 aa13.07□□□□□ -0.32
HMGN1-206ENST00000431390 MRAP2Q96G30 205 aa13.07□□□□□ -0.32
HMGN1-206ENST00000431390 NOP10Q9NPE3 64 aaKnown RBP13.07□□□□□ -0.32
HMGN1-206ENST00000431390 D6R8Y8 96 aa13.07□□□□□ -0.32
HMGN1-206ENST00000431390 CRYGDP07320 174 aa13.07□□□□□ -0.32
HMGN1-206ENST00000431390 CKS2P33552 79 aa13.07□□□□□ -0.32
HMGN1-206ENST00000431390 LINC00315P59091 139 aa13.07□□□□□ -0.32
HMGN1-206ENST00000431390 A0A087WWL8 130 aa13.06□□□□□ -0.32
HMGN1-206ENST00000431390 TRGV1A0A0A0MS02 117 aa13.06□□□□□ -0.32
HMGN1-206ENST00000431390 S100A6P06703 90 aa13.06□□□□□ -0.32
HMGN1-206ENST00000431390 Q0VG73 95 aa13.06□□□□□ -0.32
HMGN1-206ENST00000431390 OR10J3Q5JRS4 329 aa13.06□□□□□ -0.32
HMGN1-206ENST00000431390 RS1O15537 224 aa13.05□□□□□ -0.32
HMGN1-206ENST00000431390 MGPP08493 103 aa13.05□□□□□ -0.32
HMGN1-206ENST00000431390 PRELID3AQ96N28 172 aa13.05□□□□□ -0.32
HMGN1-206ENST00000431390 SAMD10Q9BYL1 202 aa13.05□□□□□ -0.32
HMGN1-206ENST00000431390 LAMTOR2Q9Y2Q5 125 aa13.05□□□□□ -0.32
HMGN1-206ENST00000431390 NDUFA6P56556 154 aa13.04□□□□□ -0.32
HMGN1-206ENST00000431390 COA6Q5JTJ3 125 aaKnown RBP13.04□□□□□ -0.32
HMGN1-206ENST00000431390 FAM74A4Q5TZK3 123 aa13.04□□□□□ -0.32
HMGN1-206ENST00000431390 CFAP126Q5VTH2 177 aa13.04□□□□□ -0.32
HMGN1-206ENST00000431390 Q6ZTI0 123 aa13.04□□□□□ -0.32
HMGN1-206ENST00000431390 C18orf32Q8TCD1 76 aa13.04□□□□□ -0.32
HMGN1-206ENST00000431390 RHODO00212 210 aa13.03□□□□□ -0.32
HMGN1-206ENST00000431390 UFSP1Q6NVU6 142 aa13.03□□□□□ -0.32
HMGN1-206ENST00000431390 Q8NAQ8 132 aa13.03□□□□□ -0.32
HMGN1-206ENST00000431390 B9D2Q9BPU9 175 aa13.03□□□□□ -0.32
HMGN1-206ENST00000431390 NACAE9PAV3 2078 aa13.03□□□□□ -0.32
HMGN1-206ENST00000431390 TENM3Q9P273 2699 aa13.03□□□□□ -0.32
HMGN1-206ENST00000431390 IGHV4-28A0A0C4DH34 117 aa13.03□□□□□ -0.32
HMGN1-206ENST00000431390 SMKR1H3BMG3 65 aa13.03□□□□□ -0.32
HMGN1-206ENST00000431390 NCR2O95944 276 aa13.03□□□□□ -0.32
HMGN1-206ENST00000431390 ZFP2Q6ZN57 461 aa13.03□□□□□ -0.32
HMGN1-206ENST00000431390 TRAV26-2A0A0B4J265 109 aa13.02□□□□□ -0.33
HMGN1-206ENST00000431390 TRAV4A0A0B4J268 109 aa13.02□□□□□ -0.33
HMGN1-206ENST00000431390 LINC00612Q8N6U2 182 aa13.02□□□□□ -0.33
HMGN1-206ENST00000431390 LYRM9A8MSI8 78 aa13.01□□□□□ -0.33
HMGN1-206ENST00000431390 F5H697 171 aa13.01□□□□□ -0.33
HMGN1-206ENST00000431390 EMP1P54849 157 aa13.01□□□□□ -0.33
HMGN1-206ENST00000431390 ZNF56Q15929 161 aa13.01□□□□□ -0.33
HMGN1-206ENST00000431390 SUMO4Q6EEV6 95 aa13.01□□□□□ -0.33
HMGN1-206ENST00000431390 C5orf52A6NGY3 159 aa13□□□□□ -0.33
HMGN1-206ENST00000431390 CIDEAO60543 219 aa13□□□□□ -0.33
HMGN1-206ENST00000431390 TNFRSF6BO95407 300 aa13□□□□□ -0.33
HMGN1-206ENST00000431390 PPP1R17O96001 155 aa13□□□□□ -0.33
HMGN1-206ENST00000431390 NPYP01303 97 aa13□□□□□ -0.33
HMGN1-206ENST00000431390 BAGE3Q86Y29 109 aa13□□□□□ -0.33
HMGN1-206ENST00000431390 NRACQ8N912 160 aa13□□□□□ -0.33
HMGN1-206ENST00000431390 OR4C5Q8NGB2 326 aa13□□□□□ -0.33
HMGN1-206ENST00000431390 EDA2RQ9HAV5 297 aa13□□□□□ -0.33
HMGN1-206ENST00000431390 GAGE12BA1L429 117 aa12.99□□□□□ -0.33
HMGN1-206ENST00000431390 GAGE7O76087 117 aa12.99□□□□□ -0.33
HMGN1-206ENST00000431390 GAS8-AS1O95177 125 aa12.99□□□□□ -0.33
HMGN1-206ENST00000431390 GAGE12FP0CL80 117 aa12.99□□□□□ -0.33
HMGN1-206ENST00000431390 GAGE12GP0CL81 117 aa12.99□□□□□ -0.33
HMGN1-206ENST00000431390 GAGE12IP0CL82 117 aa12.99□□□□□ -0.33
HMGN1-206ENST00000431390 IQCJQ1A5X6 159 aa12.99□□□□□ -0.33
HMGN1-206ENST00000431390 C18orf15Q96N68 181 aa12.99□□□□□ -0.33
HMGN1-206ENST00000431390 TRGV2A0A075B6R0 118 aa12.98□□□□□ -0.33
HMGN1-206ENST00000431390 GATA1P15976 413 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-206ENST00000431390 SNRPEP62304 92 aaKnown RBP12.98□□□□□ -0.33
HMGN1-206ENST00000431390 SBSPONQ8IVN8 264 aa12.98□□□□□ -0.33
HMGN1-206ENST00000431390 PRSS47A8MTI9 375 aa12.98□□□□□ -0.33
HMGN1-206ENST00000431390 MAP1LC3AQ9H492 121 aa12.98□□□□□ -0.33
HMGN1-206ENST00000431390 RETNQ9HD89 108 aa12.98□□□□□ -0.33
HMGN1-206ENST00000431390 DKK2Q9UBU2 259 aa12.98□□□□□ -0.33
HMGN1-206ENST00000431390 IGHV3-73A0A0B4J1V6 119 aa12.97□□□□□ -0.33
HMGN1-206ENST00000431390 H7C1H1 209 aa12.97□□□□□ -0.33
HMGN1-206ENST00000431390 M0QY20 66 aa12.97□□□□□ -0.33
HMGN1-206ENST00000431390 HOXA5P20719 270 aa12.97□□□□□ -0.33
HMGN1-206ENST00000431390 FAM222AQ5U5X8 452 aa12.97□□□□□ -0.33
HMGN1-206ENST00000431390 SPATA25Q9BR10 227 aa12.97□□□□□ -0.33
HMGN1-206ENST00000431390 SERF1AO75920 110 aa12.96□□□□□ -0.33
HMGN1-206ENST00000431390 IGHV3-53P01767 116 aa12.96□□□□□ -0.33
HMGN1-206ENST00000431390 ESDP10768 282 aa12.96□□□□□ -0.33
HMGN1-206ENST00000431390 ZNF479Q96JC4 524 aa12.96□□□□□ -0.33
HMGN1-206ENST00000431390 C20orf78Q9BR46 151 aa12.96□□□□□ -0.33
HMGN1-206ENST00000431390 TM2D3Q9BRN9 247 aa12.96□□□□□ -0.33
HMGN1-206ENST00000431390 TEX48A0A1B0GUV7 120 aa12.95□□□□□ -0.34
HMGN1-206ENST00000431390 DEFB4AO15263 64 aa12.95□□□□□ -0.34
HMGN1-206ENST00000431390 LINC00310P59036 64 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms