RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 BLOC1S1P78537 153 aa6.67□□□□□ -1.34
HDAC6-207ENST00000430858 LELP1Q5T871 98 aa6.67□□□□□ -1.34
HDAC6-207ENST00000430858 FAM74A4Q5TZK3 123 aa6.67□□□□□ -1.34
HDAC6-207ENST00000430858 ALKAL2Q6UX46 152 aa6.67□□□□□ -1.34
HDAC6-207ENST00000430858 DAZAP1Q96EP5 407 aaKnown RBP6.67□□□□□ -1.34
HDAC6-207ENST00000430858 SSBP4Q9BWG4 385 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-207ENST00000430858 BIN3Q9NQY0 253 aa6.67□□□□□ -1.34
HDAC6-207ENST00000430858 MED9Q9NWA0 146 aa6.67□□□□□ -1.34
HDAC6-207ENST00000430858 A0A087WWL8 130 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 RAB19A4D1S5 217 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 GAGE12JA6NER3 117 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 IGLV2-8P01709 118 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 LINC00694P0DN24 101 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 GAGE1Q13065 139 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 GAGE4Q13068 117 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 GAGE5Q13069 117 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 GAGE13Q4V321 117 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 LINC01556Q5JQF7 62 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 OR10J3Q5JRS4 329 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 SPANXN1Q5VSR9 72 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
HDAC6-207ENST00000430858 C14orf178Q8N769 122 aaPredicted RBP6.66□□□□□ -1.34
HDAC6-207ENST00000430858 OR10AG1Q8NH19 301 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 MSRB1Q9NZV6 116 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 DNAH17Q9UFH2 4485 aa6.66□□□□□ -1.34
HDAC6-207ENST00000430858 TRBV10-1A0A0K0K1A3 114 aa6.65□□□□□ -1.34
HDAC6-207ENST00000430858 A0A1B0GVG6 124 aa6.65□□□□□ -1.34
HDAC6-207ENST00000430858 C19orf71A6NCJ1 209 aa6.65□□□□□ -1.34
HDAC6-207ENST00000430858 RPS20P60866 119 aaKnown RBP6.65□□□□□ -1.34
HDAC6-207ENST00000430858 LYPD6BQ8NI32 183 aa6.65□□□□□ -1.34
HDAC6-207ENST00000430858 TRBV20OR9-2A0A075B6H5 130 aa6.64□□□□□ -1.35
HDAC6-207ENST00000430858 A0A087WWC5 75 aa6.64□□□□□ -1.35
HDAC6-207ENST00000430858 XKRY2A2RUG3 117 aa6.64□□□□□ -1.35
HDAC6-207ENST00000430858 C16orf90A8MZG2 172 aa6.64□□□□□ -1.35
HDAC6-207ENST00000430858 P01737 135 aa6.64□□□□□ -1.35
HDAC6-207ENST00000430858 NKX2-5P52952 324 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-207ENST00000430858 RAB4BP61018 213 aa6.64□□□□□ -1.35
HDAC6-207ENST00000430858 RPL36AP83881 106 aaKnown RBP6.64□□□□□ -1.35
HDAC6-207ENST00000430858 SPATA12Q7Z6I5 190 aa6.64□□□□□ -1.35
HDAC6-207ENST00000430858 OR2D3Q8NGH3 330 aa6.64□□□□□ -1.35
HDAC6-207ENST00000430858 RPL36ALQ969Q0 106 aaKnown RBP6.64□□□□□ -1.35
HDAC6-207ENST00000430858 Q9UF83 564 aa6.64□□□□□ -1.35
HDAC6-207ENST00000430858 TNFRSF18Q9Y5U5 241 aa6.64□□□□□ -1.35
HDAC6-207ENST00000430858 RBFOX3A6NFN3 312 aa6.63□□□□□ -1.35
HDAC6-207ENST00000430858 EREGO14944 169 aa6.63□□□□□ -1.35
HDAC6-207ENST00000430858 ERVFC1-1P60608 527 aa6.63□□□□□ -1.35
HDAC6-207ENST00000430858 ZNF56Q15929 161 aa6.63□□□□□ -1.35
HDAC6-207ENST00000430858 FER1L6-AS1Q8NA97 138 aa6.63□□□□□ -1.35
HDAC6-207ENST00000430858 TRBV7-3A0A075B6L6 115 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 MUC21A0A0G2JKD1 596 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 MUC21A0A140T8X8 626 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 IBA57-AS1B1ANH7 110 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 F2Z2F3 143 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 TMEM250H0YL14 139 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 IGLC6P0CF74 106 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 SMIM17P0DL12 118 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 GZMBP10144 247 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 CACNG7P62955 275 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 OR10G8Q8NGN5 311 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 AP1S3Q96PC3 154 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 TPPP3Q9BW30 176 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 PKHD1P08F94 4074 aa6.62□□□□□ -1.35
HDAC6-207ENST00000430858 DNAH11Q96DT5 4516 aa6.61□□□□□ -1.35
HDAC6-207ENST00000430858 NDUFS6O75380 124 aaKnown RBP6.61□□□□□ -1.35
HDAC6-207ENST00000430858 IGHV3-30P01768 117 aa6.61□□□□□ -1.35
HDAC6-207ENST00000430858 IGHV3-33P01772 117 aa6.61□□□□□ -1.35
HDAC6-207ENST00000430858 IGHV3-30-3P0DP02 117 aa6.61□□□□□ -1.35
HDAC6-207ENST00000430858 IGHV3-30-5P0DP03 117 aa6.61□□□□□ -1.35
HDAC6-207ENST00000430858 UBE2D3P61077 147 aa6.61□□□□□ -1.35
HDAC6-207ENST00000430858 SSTP61278 116 aa6.61□□□□□ -1.35
HDAC6-207ENST00000430858 UBE2D2P62837 147 aa6.61□□□□□ -1.35
HDAC6-207ENST00000430858 LAGE3Q14657 143 aa6.61□□□□□ -1.35
HDAC6-207ENST00000430858 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-207ENST00000430858 NUDT10Q8NFP7 164 aa6.61□□□□□ -1.35
HDAC6-207ENST00000430858 NUDT11Q96G61 164 aa6.61□□□□□ -1.35
HDAC6-207ENST00000430858 A0A087WTM6 91 aa6.6□□□□□ -1.35
HDAC6-207ENST00000430858 F5H697 171 aa6.6□□□□□ -1.35
HDAC6-207ENST00000430858 KRTAP10-2P60368 255 aa6.6□□□□□ -1.35
HDAC6-207ENST00000430858 TOR2AQ5JU69 321 aa6.6□□□□□ -1.35
HDAC6-207ENST00000430858 NEXN-AS1Q8NBZ9 246 aa6.6□□□□□ -1.35
HDAC6-207ENST00000430858 OCC1Q8TAD7 63 aa6.6□□□□□ -1.35
HDAC6-207ENST00000430858 EIF5A2Q9GZV4 153 aaKnown RBP6.6□□□□□ -1.35
HDAC6-207ENST00000430858 PGPEP1Q9NXJ5 209 aa6.6□□□□□ -1.35
HDAC6-207ENST00000430858 KIF25-AS1Q9Y6Z4 181 aa6.6□□□□□ -1.35
HDAC6-207ENST00000430858 PKD1P98161 4303 aa6.6□□□□□ -1.35
HDAC6-207ENST00000430858 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
HDAC6-207ENST00000430858 K7EN84 100 aa6.59□□□□□ -1.35
HDAC6-207ENST00000430858 PSCAO43653 123 aa6.59□□□□□ -1.35
HDAC6-207ENST00000430858 TRGC1P0CF51 173 aa6.59□□□□□ -1.35
HDAC6-207ENST00000430858 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
HDAC6-207ENST00000430858 WDR73Q6P4I2 378 aa6.59□□□□□ -1.35
HDAC6-207ENST00000430858 LYZL1Q6UWQ5 148 aa6.59□□□□□ -1.35
HDAC6-207ENST00000430858 NIT1Q86X76 327 aa6.59□□□□□ -1.35
HDAC6-207ENST00000430858 FAM210AQ96ND0 272 aa6.59□□□□□ -1.35
HDAC6-207ENST00000430858 RNASE7Q9H1E1 156 aaKnown RBP6.59□□□□□ -1.35
HDAC6-207ENST00000430858 RPP21Q9H633 154 aaKnown RBP6.59□□□□□ -1.35
HDAC6-207ENST00000430858 URGCP-MRPS24S4R325 110 aa6.59□□□□□ -1.35
HDAC6-207ENST00000430858 KIAA1109Q2LD37 5005 aa6.59□□□□□ -1.35
HDAC6-207ENST00000430858 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
HDAC6-207ENST00000430858 TRAV8-3A0A0A6YYJ7 113 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms