RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 UBR4Q5T4S7 5183 aa10.83□□□□□ -0.68
VARS-216ENST00000428445 IGKV2D-24A0A075B6R9 120 aa10.83□□□□□ -0.68
VARS-216ENST00000428445 PTTG1O95997 202 aa10.83□□□□□ -0.68
VARS-216ENST00000428445 GIPP09681 153 aaPredicted RBP10.83□□□□□ -0.68
VARS-216ENST00000428445 BATF3Q9NR55 127 aa10.83□□□□□ -0.68
VARS-216ENST00000428445 RNF222A6NCQ9 220 aa10.82□□□□□ -0.68
VARS-216ENST00000428445 B4DEV8 164 aa10.82□□□□□ -0.68
VARS-216ENST00000428445 H3BVH4 76 aa10.82□□□□□ -0.68
VARS-216ENST00000428445 PEX7O00628 323 aa10.82□□□□□ -0.68
VARS-216ENST00000428445 CIRBP-AS1Q8TBR5 109 aa10.82□□□□□ -0.68
VARS-216ENST00000428445 TCEAL7Q9BRU2 100 aa10.82□□□□□ -0.68
VARS-216ENST00000428445 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
VARS-216ENST00000428445 GRIFINA4D1Z8 144 aa10.81□□□□□ -0.68
VARS-216ENST00000428445 KRBOX1C9JBD0 128 aa10.81□□□□□ -0.68
VARS-216ENST00000428445 CRIP1P50238 77 aa10.81□□□□□ -0.68
VARS-216ENST00000428445 ELOBQ15370 118 aa10.81□□□□□ -0.68
VARS-216ENST00000428445 NIT1Q86X76 327 aa10.81□□□□□ -0.68
VARS-216ENST00000428445 Q8N976 141 aa10.81□□□□□ -0.68
VARS-216ENST00000428445 URGCP-MRPS24S4R325 110 aa10.81□□□□□ -0.68
VARS-216ENST00000428445 A0A087WWL8 130 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 TRBV10-1A0A0K0K1A3 114 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 TRBV6-1A0A0K0K1D8 114 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 FAM74A7A6NL05 159 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 M0R036 132 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 ARMS2P0C7Q2 107 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 FAM74A4Q5TZK3 123 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 RPL7L1Q6DKI1 246 aaKnown RBP10.8□□□□□ -0.68
VARS-216ENST00000428445 OR11H4Q8NGC9 324 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 UBE2WQ96B02 151 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 SFRP2Q96HF1 295 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 FMC1Q96HJ9 113 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 CHAC1Q9BUX1 264 aa10.8□□□□□ -0.68
VARS-216ENST00000428445 FHITP49789 147 aa10.79□□□□□ -0.68
VARS-216ENST00000428445 UBE2G2P60604 165 aa10.79□□□□□ -0.68
VARS-216ENST00000428445 ZNF726P1Q15940 193 aa10.79□□□□□ -0.68
VARS-216ENST00000428445 Q5BKY6 102 aa10.79□□□□□ -0.68
VARS-216ENST00000428445 AKR1C8PQ5T2L2 129 aa10.79□□□□□ -0.68
VARS-216ENST00000428445 FAM162BQ5T6X4 162 aa10.79□□□□□ -0.68
VARS-216ENST00000428445 PHLDA3Q9Y5J5 127 aa10.79□□□□□ -0.68
VARS-216ENST00000428445 IGLV2-8P01709 118 aa10.78□□□□□ -0.68
VARS-216ENST00000428445 ZNF674Q2M3X9 581 aa10.78□□□□□ -0.68
VARS-216ENST00000428445 Q86TA4 180 aa10.78□□□□□ -0.68
VARS-216ENST00000428445 TMSB15BA0A087X1C1 80 aa10.77□□□□□ -0.69
VARS-216ENST00000428445 TPT1P13693 172 aaKnown RBP10.77□□□□□ -0.69
VARS-216ENST00000428445 UBE2G1P62253 170 aa10.77□□□□□ -0.69
VARS-216ENST00000428445 LINC01559Q495D7 138 aa10.77□□□□□ -0.69
VARS-216ENST00000428445 KCNIP4Q6PIL6 250 aa10.77□□□□□ -0.69
VARS-216ENST00000428445 ZC2HC1AQ96GY0 325 aa10.77□□□□□ -0.69
VARS-216ENST00000428445 A0A087WX48 190 aa10.76□□□□□ -0.69
VARS-216ENST00000428445 SH2D1AO60880 128 aa10.76□□□□□ -0.69
VARS-216ENST00000428445 RPL36AP83881 106 aaKnown RBP10.76□□□□□ -0.69
VARS-216ENST00000428445 Q0VG73 95 aa10.76□□□□□ -0.69
VARS-216ENST00000428445 ZFP82Q8N141 532 aa10.76□□□□□ -0.69
VARS-216ENST00000428445 STOML3Q8TAV4 291 aa10.76□□□□□ -0.69
VARS-216ENST00000428445 RPL36ALQ969Q0 106 aaKnown RBP10.76□□□□□ -0.69
VARS-216ENST00000428445 TRBV7-3A0A075B6L6 115 aa10.75□□□□□ -0.69
VARS-216ENST00000428445 FXYD6-FXYD2A0A087WZ82 144 aa10.75□□□□□ -0.69
VARS-216ENST00000428445 M0R381 172 aa10.75□□□□□ -0.69
VARS-216ENST00000428445 LTAP01374 205 aa10.75□□□□□ -0.69
VARS-216ENST00000428445 S100A9P06702 114 aaKnown RBP10.75□□□□□ -0.69
VARS-216ENST00000428445 SERTAD4-AS1Q5TG53 156 aa10.75□□□□□ -0.69
VARS-216ENST00000428445 ATRAIDQ6UW56 229 aa10.75□□□□□ -0.69
VARS-216ENST00000428445 TMEM262E9PQX1 116 aa10.74□□□□□ -0.69
VARS-216ENST00000428445 HNRNPA3P51991 378 aaKnown RBP10.74□□□□□ -0.69
VARS-216ENST00000428445 ENHOQ6UWT2 76 aa10.74□□□□□ -0.69
VARS-216ENST00000428445 OR10G8Q8NGN5 311 aa10.74□□□□□ -0.69
VARS-216ENST00000428445 MAP1LC3B2A6NCE7 125 aa10.73□□□□□ -0.69
VARS-216ENST00000428445 C14orf177Q52M58 125 aa10.73□□□□□ -0.69
VARS-216ENST00000428445 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.73□□□□□ -0.69
VARS-216ENST00000428445 MAP1LC3BQ9GZQ8 125 aa10.73□□□□□ -0.69
VARS-216ENST00000428445 OXTP01178 125 aa10.72□□□□□ -0.69
VARS-216ENST00000428445 CXCL1P09341 107 aa10.72□□□□□ -0.69
VARS-216ENST00000428445 RAB4BP61018 213 aa10.72□□□□□ -0.69
VARS-216ENST00000428445 UBE2D3P61077 147 aa10.72□□□□□ -0.69
VARS-216ENST00000428445 PKIAP61925 76 aa10.72□□□□□ -0.69
VARS-216ENST00000428445 UBE2D2P62837 147 aa10.72□□□□□ -0.69
VARS-216ENST00000428445 C15orf54Q8N8G6 183 aa10.72□□□□□ -0.69
VARS-216ENST00000428445 CST9LP1Q5W188 147 aa10.71□□□□□ -0.69
VARS-216ENST00000428445 DAZAP1Q96EP5 407 aaKnown RBP10.71□□□□□ -0.69
VARS-216ENST00000428445 TRBV6-8A0A0A6YYG3 113 aa10.7□□□□□ -0.7
VARS-216ENST00000428445 MPV17L2Q567V2 206 aa10.7□□□□□ -0.7
VARS-216ENST00000428445 TMEM97Q5BJF2 176 aa10.7□□□□□ -0.7
VARS-216ENST00000428445 CYTL1Q9NRR1 136 aa10.7□□□□□ -0.7
VARS-216ENST00000428445 PLA2G2DQ9UNK4 145 aa10.7□□□□□ -0.7
VARS-216ENST00000428445 RPL37AP61513 92 aaKnown RBP10.69□□□□□ -0.7
VARS-216ENST00000428445 PRR27Q6MZM9 219 aa10.69□□□□□ -0.7
VARS-216ENST00000428445 MBD3L1Q8WWY6 194 aa10.69□□□□□ -0.7
VARS-216ENST00000428445 SSBP4Q9BWG4 385 aaPredicted RBP10.69□□□□□ -0.7
VARS-216ENST00000428445 C1orf43Q9BWL3 253 aa10.69□□□□□ -0.7
VARS-216ENST00000428445 MUC21A0A0G2JKD1 596 aa10.68□□□□□ -0.7
VARS-216ENST00000428445 MUC21A0A140T8X8 626 aa10.68□□□□□ -0.7
VARS-216ENST00000428445 UMAD1C9J7I0 102 aa10.68□□□□□ -0.7
VARS-216ENST00000428445 USP17L23D6RBM5 183 aa10.68□□□□□ -0.7
VARS-216ENST00000428445 PANO1I0J062 215 aa10.68□□□□□ -0.7
VARS-216ENST00000428445 HLA-DQA1P01909 254 aa10.68□□□□□ -0.7
VARS-216ENST00000428445 PRSS1P07477 247 aa10.68□□□□□ -0.7
VARS-216ENST00000428445 AKR1C3P42330 323 aa10.68□□□□□ -0.7
VARS-216ENST00000428445 MLST8Q9BVC4 326 aa10.68□□□□□ -0.7
VARS-216ENST00000428445 ZNF471Q9BX82 626 aaPredicted RBP10.68□□□□□ -0.7
VARS-216ENST00000428445 SNAI2O43623 268 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms