RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 A0A1W2PPQ1 181 aa12.34□□□□□ -0.43
MMP11-202ENST00000428253 F2Z2F3 143 aa12.34□□□□□ -0.43
MMP11-202ENST00000428253 CTRLP40313 264 aa12.34□□□□□ -0.43
MMP11-202ENST00000428253 RPL23P62829 140 aaKnown RBP12.34□□□□□ -0.43
MMP11-202ENST00000428253 CT83Q5H943 113 aa12.34□□□□□ -0.43
MMP11-202ENST00000428253 CNFNQ9BYD5 112 aa12.34□□□□□ -0.43
MMP11-202ENST00000428253 OSTCQ9NRP0 149 aa12.34□□□□□ -0.43
MMP11-202ENST00000428253 NAT8Q9UHE5 227 aa12.34□□□□□ -0.43
MMP11-202ENST00000428253 A0A087WWL8 130 aa12.33□□□□□ -0.44
MMP11-202ENST00000428253 GATCO43716 136 aaKnown RBP12.33□□□□□ -0.44
MMP11-202ENST00000428253 SPANXN1Q5VSR9 72 aa12.33□□□□□ -0.44
MMP11-202ENST00000428253 WDR73Q6P4I2 378 aa12.33□□□□□ -0.44
MMP11-202ENST00000428253 LYZL1Q6UWQ5 148 aa12.33□□□□□ -0.44
MMP11-202ENST00000428253 UBE2DNLQ8IWF7 75 aa12.33□□□□□ -0.44
MMP11-202ENST00000428253 ZNRF2Q8NHG8 242 aa12.33□□□□□ -0.44
MMP11-202ENST00000428253 GTSF1Q8WW33 167 aa12.33□□□□□ -0.44
MMP11-202ENST00000428253 ISOC2Q96AB3 205 aa12.33□□□□□ -0.44
MMP11-202ENST00000428253 UPK3BQ9BT76 320 aa12.33□□□□□ -0.44
MMP11-202ENST00000428253 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
MMP11-202ENST00000428253 LINC00315P59091 139 aa12.32□□□□□ -0.44
MMP11-202ENST00000428253 ERVFC1-1P60608 527 aa12.32□□□□□ -0.44
MMP11-202ENST00000428253 CACNG7P62955 275 aa12.32□□□□□ -0.44
MMP11-202ENST00000428253 RHOHQ15669 191 aa12.32□□□□□ -0.44
MMP11-202ENST00000428253 SOHLH1Q5JUK2 328 aa12.32□□□□□ -0.44
MMP11-202ENST00000428253 NEGR1Q7Z3B1 354 aa12.32□□□□□ -0.44
MMP11-202ENST00000428253 MSRB1Q9NZV6 116 aa12.32□□□□□ -0.44
MMP11-202ENST00000428253 Q9UF83 564 aa12.32□□□□□ -0.44
MMP11-202ENST00000428253 MRPS16Q9Y3D3 137 aaKnown RBP12.32□□□□□ -0.44
MMP11-202ENST00000428253 LINC00694P0DN24 101 aa12.31□□□□□ -0.44
MMP11-202ENST00000428253 SRIP30626 198 aa12.31□□□□□ -0.44
MMP11-202ENST00000428253 FOXA3P55318 350 aaPredicted RBP12.31□□□□□ -0.44
MMP11-202ENST00000428253 FAM74A4Q5TZK3 123 aa12.31□□□□□ -0.44
MMP11-202ENST00000428253 LYPD5Q6UWN5 251 aa12.31□□□□□ -0.44
MMP11-202ENST00000428253 C14orf178Q8N769 122 aaPredicted RBP12.31□□□□□ -0.44
MMP11-202ENST00000428253 PRADC1Q9BSG0 188 aa12.31□□□□□ -0.44
MMP11-202ENST00000428253 A8MWL6 223 aa12.3□□□□□ -0.44
MMP11-202ENST00000428253 Q6ZR54 194 aa12.3□□□□□ -0.44
MMP11-202ENST00000428253 TPPP3Q9BW30 176 aa12.3□□□□□ -0.44
MMP11-202ENST00000428253 V9GYV3 84 aa12.3□□□□□ -0.44
MMP11-202ENST00000428253 SH2D6Q7Z4S9 175 aa12.29□□□□□ -0.44
MMP11-202ENST00000428253 FAM231BA6NCW3 169 aa12.28□□□□□ -0.44
MMP11-202ENST00000428253 NTF3P20783 257 aa12.28□□□□□ -0.44
MMP11-202ENST00000428253 TIRAPP58753 221 aa12.28□□□□□ -0.44
MMP11-202ENST00000428253 RAB4BP61018 213 aa12.28□□□□□ -0.44
MMP11-202ENST00000428253 SSTP61278 116 aa12.28□□□□□ -0.44
MMP11-202ENST00000428253 TSKUQ8WUA8 353 aa12.28□□□□□ -0.44
MMP11-202ENST00000428253 AP1S3Q96PC3 154 aa12.28□□□□□ -0.44
MMP11-202ENST00000428253 GFRA4Q9GZZ7 299 aa12.28□□□□□ -0.44
MMP11-202ENST00000428253 ADIRFQ15847 76 aa12.27□□□□□ -0.45
MMP11-202ENST00000428253 TRBV10-1A0A0K0K1A3 114 aa12.26□□□□□ -0.45
MMP11-202ENST00000428253 C15orf54Q8N8G6 183 aa12.26□□□□□ -0.45
MMP11-202ENST00000428253 Q9H8V8 135 aa12.26□□□□□ -0.45
MMP11-202ENST00000428253 IGLV2-18A0A075B6J9 118 aa12.25□□□□□ -0.45
MMP11-202ENST00000428253 EVI2AP22794 236 aa12.25□□□□□ -0.45
MMP11-202ENST00000428253 UQCC3Q6UW78 93 aa12.25□□□□□ -0.45
MMP11-202ENST00000428253 OR10G8Q8NGN5 311 aa12.25□□□□□ -0.45
MMP11-202ENST00000428253 GAGE12JA6NER3 117 aa12.24□□□□□ -0.45
MMP11-202ENST00000428253 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
MMP11-202ENST00000428253 GAGE1Q13065 139 aa12.24□□□□□ -0.45
MMP11-202ENST00000428253 GAGE4Q13068 117 aa12.24□□□□□ -0.45
MMP11-202ENST00000428253 GAGE5Q13069 117 aa12.24□□□□□ -0.45
MMP11-202ENST00000428253 GAGE13Q4V321 117 aa12.24□□□□□ -0.45
MMP11-202ENST00000428253 PGLYRP4Q96LB8 373 aa12.24□□□□□ -0.45
MMP11-202ENST00000428253 NBDYA0A0U1RRE5 68 aa12.23□□□□□ -0.45
MMP11-202ENST00000428253 LINC00862A6NCI5 91 aa12.23□□□□□ -0.45
MMP11-202ENST00000428253 HIGD1CA8MV81 97 aa12.23□□□□□ -0.45
MMP11-202ENST00000428253 ZNF56Q15929 161 aa12.23□□□□□ -0.45
MMP11-202ENST00000428253 ATP6V0E2Q8NHE4 81 aa12.23□□□□□ -0.45
MMP11-202ENST00000428253 M0R2N4 97 aa12.22□□□□□ -0.45
MMP11-202ENST00000428253 SMIM17P0DL12 118 aa12.22□□□□□ -0.45
MMP11-202ENST00000428253 TWIST1Q15672 202 aa12.22□□□□□ -0.45
MMP11-202ENST00000428253 NEXN-AS1Q8NBZ9 246 aa12.22□□□□□ -0.45
MMP11-202ENST00000428253 GTSF1LQ9H1H1 148 aa12.22□□□□□ -0.45
MMP11-202ENST00000428253 SMIM27A0A1W2PRY6 76 aa12.21□□□□□ -0.45
MMP11-202ENST00000428253 M0QY20 66 aa12.21□□□□□ -0.45
MMP11-202ENST00000428253 ADCYAP1P18509 176 aa12.21□□□□□ -0.45
MMP11-202ENST00000428253 NUP35Q8NFH5 326 aa12.21□□□□□ -0.45
MMP11-202ENST00000428253 KRTAP1-5Q9BYS1 174 aa12.21□□□□□ -0.45
MMP11-202ENST00000428253 DPH3P1Q9H4G8 78 aa12.21□□□□□ -0.45
MMP11-202ENST00000428253 DNAH10Q8IVF4 4471 aa12.2□□□□□ -0.46
MMP11-202ENST00000428253 TRBV7-3A0A075B6L6 115 aa12.2□□□□□ -0.46
MMP11-202ENST00000428253 TMEM218A2RU14 115 aa12.2□□□□□ -0.46
MMP11-202ENST00000428253 F5H697 171 aa12.2□□□□□ -0.46
MMP11-202ENST00000428253 SIVA1O15304 175 aa12.2□□□□□ -0.46
MMP11-202ENST00000428253 UBE2D3P61077 147 aa12.2□□□□□ -0.46
MMP11-202ENST00000428253 UBE2D2P62837 147 aa12.2□□□□□ -0.46
MMP11-202ENST00000428253 PNRC1Q12796 327 aaPredicted RBP12.2□□□□□ -0.46
MMP11-202ENST00000428253 A0A1B0GUT8 65 aa12.19□□□□□ -0.46
MMP11-202ENST00000428253 RPL36AP83881 106 aaKnown RBP12.19□□□□□ -0.46
MMP11-202ENST00000428253 LELP1Q5T871 98 aa12.19□□□□□ -0.46
MMP11-202ENST00000428253 SUMO4Q6EEV6 95 aa12.19□□□□□ -0.46
MMP11-202ENST00000428253 COMMD7Q86VX2 200 aa12.19□□□□□ -0.46
MMP11-202ENST00000428253 WFDC10BQ8IUB3 73 aa12.19□□□□□ -0.46
MMP11-202ENST00000428253 RPL36ALQ969Q0 106 aaKnown RBP12.19□□□□□ -0.46
MMP11-202ENST00000428253 MGPP08493 103 aa12.18□□□□□ -0.46
MMP11-202ENST00000428253 NAT8BQ9UHF3 227 aa12.18□□□□□ -0.46
MMP11-202ENST00000428253 DNAH2Q9P225 4427 aa12.18□□□□□ -0.46
MMP11-202ENST00000428253 DNAH10OSP0CZ25 163 aa12.17□□□□□ -0.46
MMP11-202ENST00000428253 RTL8CO15255 209 aa12.16□□□□□ -0.46
MMP11-202ENST00000428253 TTC32Q5I0X7 151 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms