RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 CACNA1BQ00975 2339 aa5.84□□□□□ -1.47
LRCH3-204ENST00000428136 AGRNO00468 2067 aa5.84□□□□□ -1.47
LRCH3-204ENST00000428136 B4DSR2 109 aa5.84□□□□□ -1.47
LRCH3-204ENST00000428136 K7EQG2 157 aa5.84□□□□□ -1.47
LRCH3-204ENST00000428136 M0QY20 66 aa5.84□□□□□ -1.47
LRCH3-204ENST00000428136 RHOHQ15669 191 aa5.84□□□□□ -1.47
LRCH3-204ENST00000428136 AMELXQ99217 191 aa5.84□□□□□ -1.47
LRCH3-204ENST00000428136 KIR2DL4Q99706 377 aa5.84□□□□□ -1.47
LRCH3-204ENST00000428136 NBASA2RRP1 2371 aa5.84□□□□□ -1.48
LRCH3-204ENST00000428136 A0A0J9YY99 117 aa5.84□□□□□ -1.48
LRCH3-204ENST00000428136 SDHAF1A6NFY7 115 aa5.84□□□□□ -1.48
LRCH3-204ENST00000428136 H3BMG7 143 aa5.84□□□□□ -1.48
LRCH3-204ENST00000428136 DSCR9P59020 149 aa5.84□□□□□ -1.48
LRCH3-204ENST00000428136 IGKV3-7A0A075B6H7 116 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 TRAV12-3A0A0B4J271 114 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 SRD5A1P18405 259 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 ATP5J2P56134 94 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 HERVK_113P61574 105 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 GAGE13Q4V321 117 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 ITPR1Q14643 2758 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 SPTBN1Q01082 2364 aaKnown RBP5.83□□□□□ -1.48
LRCH3-204ENST00000428136 UBE2D3P61077 147 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 UBE2D2P62837 147 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 RPL24P83731 157 aaKnown RBP5.83□□□□□ -1.48
LRCH3-204ENST00000428136 SLC25A29Q8N8R3 303 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 SYT8Q8NBV8 401 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 ZNRF2Q8NHG8 242 aa5.83□□□□□ -1.48
LRCH3-204ENST00000428136 A0A087WWL8 130 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 SCGB1A1P11684 91 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 RPL39P62891 51 aaKnown RBP5.82□□□□□ -1.48
LRCH3-204ENST00000428136 SPATA25Q9BR10 227 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 IGHV1OR15-1A0A075B7D0 117 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 IGHV3-30P01768 117 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 IGHV3-30-5P0DP03 117 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 SNRPD3P62318 126 aaKnown RBP5.82□□□□□ -1.48
LRCH3-204ENST00000428136 CD300EQ496F6 205 aaPredicted RBP5.82□□□□□ -1.48
LRCH3-204ENST00000428136 TRPT1Q86TN4 253 aaKnown RBP5.82□□□□□ -1.48
LRCH3-204ENST00000428136 KLHL30-AS1Q8NEE0 82 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 MDFICQ9P1T7 246 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 A0A096LNT2 108 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 A8MTW9 85 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 P0DMU3 169 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 FAM231AP0DMU4 169 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 FAM231CP0DMU5 169 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 AMTNQ6UX39 209 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 Q8N1Y9 231 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 ATP6V0E2Q8NHE4 81 aa5.82□□□□□ -1.48
LRCH3-204ENST00000428136 COL6A6A6NMZ7 2263 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 TMEM238C9JI98 176 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 TSPAN13O95857 204 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 TSPEAR-AS2P59090 65 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 CFAP126Q5VTH2 177 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 NDUFA11Q86Y39 141 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 PGPEP1Q9NXJ5 209 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 J3QLI3 93 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 J3QR89 54 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 SCGB2A2Q13296 93 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 DEFB112Q30KQ8 113 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 SCGB1D4Q6XE38 83 aa5.81□□□□□ -1.48
LRCH3-204ENST00000428136 SPAG8Q99932 426 aaPredicted RBP5.81□□□□□ -1.48
LRCH3-204ENST00000428136 TMEM223A0PJW6 202 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 IGHV4-59P01825 116 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 ZNF688P0C7X2 276 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 C20orf203Q8NBC4 194 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 F5H697 171 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 LEPROTO15243 131 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 SMCPP49901 116 aaPredicted RBP5.8□□□□□ -1.48
LRCH3-204ENST00000428136 SRSF9Q13242 221 aaKnown RBP eCLIP5.8□□□□□ -1.48
LRCH3-204ENST00000428136 SBSPONQ8IVN8 264 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 DLX4Q92988 240 aaPredicted RBP5.8□□□□□ -1.48
LRCH3-204ENST00000428136 PTH2Q96A98 100 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 MRPL16Q9NX20 251 aaKnown RBP5.8□□□□□ -1.48
LRCH3-204ENST00000428136 CELSR1Q9NYQ6 3014 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 GAGE12HA6NDE8 117 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 I3L3M4 83 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 FSHBP01225 129 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 ELANEP08246 267 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 CRYBA4P53673 196 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 PIK3CD-AS1Q5SR53 167 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 C10orf99Q6UWK7 81 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 SH2D6Q7Z4S9 175 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 LINC01356Q8N9X3 169 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 WFDC12Q8WWY7 111 aa5.8□□□□□ -1.48
LRCH3-204ENST00000428136 TRGV11A0A075B6L2 103 aa5.79□□□□□ -1.48
LRCH3-204ENST00000428136 TRAV12-2A0A075B6T6 113 aa5.79□□□□□ -1.48
LRCH3-204ENST00000428136 J3QQQ9 107 aa5.79□□□□□ -1.48
LRCH3-204ENST00000428136 CFC1BP0CG36 223 aa5.79□□□□□ -1.48
LRCH3-204ENST00000428136 CFC1P0CG37 223 aa5.79□□□□□ -1.48
LRCH3-204ENST00000428136 ETDBQ3ZM63 59 aa5.79□□□□□ -1.48
LRCH3-204ENST00000428136 SIGMAR1Q99720 223 aa5.79□□□□□ -1.48
LRCH3-204ENST00000428136 PYGO1Q9Y3Y4 419 aa5.79□□□□□ -1.48
LRCH3-204ENST00000428136 UBE2E2Q96LR5 201 aa5.79□□□□□ -1.48
LRCH3-204ENST00000428136 EMP1P54849 157 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 ZNF56Q15929 161 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 LYRM7Q5U5X0 104 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 FAM104AQ969W3 186 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 TSSC4Q9Y5U2 329 aaPredicted RBP5.78□□□□□ -1.48
LRCH3-204ENST00000428136 TRBV20-1A0A075B6N2 111 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 TRAV2A0A0B4J234 112 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 SPINK13Q1W4C9 94 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms