RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 K7EP13 123 aa11.76□□□□□ -0.53
LMCD1-204ENST00000426878 NDUFS6O75380 124 aaKnown RBP11.75□□□□□ -0.53
LMCD1-204ENST00000426878 DNAH10OSP0CZ25 163 aa11.75□□□□□ -0.53
LMCD1-204ENST00000426878 RPS20P60866 119 aaKnown RBP11.75□□□□□ -0.53
LMCD1-204ENST00000426878 OR10AG1Q8NH19 301 aa11.75□□□□□ -0.53
LMCD1-204ENST00000426878 LINC00694P0DN24 101 aa11.74□□□□□ -0.53
LMCD1-204ENST00000426878 WFDC10BQ8IUB3 73 aa11.74□□□□□ -0.53
LMCD1-204ENST00000426878 LY96Q9Y6Y9 160 aa11.74□□□□□ -0.53
LMCD1-204ENST00000426878 TRAV9-2A0A087WT02 112 aa11.73□□□□□ -0.53
LMCD1-204ENST00000426878 A0A087WWL8 130 aa11.73□□□□□ -0.53
LMCD1-204ENST00000426878 FAM74A4Q5TZK3 123 aa11.73□□□□□ -0.53
LMCD1-204ENST00000426878 C14orf178Q8N769 122 aaPredicted RBP11.73□□□□□ -0.53
LMCD1-204ENST00000426878 OR2D3Q8NGH3 330 aa11.73□□□□□ -0.53
LMCD1-204ENST00000426878 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
LMCD1-204ENST00000426878 GTSF1LQ9H1H1 148 aa11.73□□□□□ -0.53
LMCD1-204ENST00000426878 XKRY2A2RUG3 117 aa11.72□□□□□ -0.53
LMCD1-204ENST00000426878 P01737 135 aa11.72□□□□□ -0.53
LMCD1-204ENST00000426878 IGLC6P0CF74 106 aa11.72□□□□□ -0.53
LMCD1-204ENST00000426878 SPANXN1Q5VSR9 72 aa11.72□□□□□ -0.53
LMCD1-204ENST00000426878 DNAH11Q96DT5 4516 aa11.72□□□□□ -0.53
LMCD1-204ENST00000426878 TRBV10-1A0A0K0K1A3 114 aa11.71□□□□□ -0.53
LMCD1-204ENST00000426878 TNP2Q05952 138 aa11.71□□□□□ -0.53
LMCD1-204ENST00000426878 LELP1Q5T871 98 aa11.71□□□□□ -0.53
LMCD1-204ENST00000426878 Q9UF83 564 aa11.71□□□□□ -0.53
LMCD1-204ENST00000426878 GAGE12JA6NER3 117 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 EVI2AP22794 236 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 LINC00315P59091 139 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 GAGE1Q13065 139 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 GAGE4Q13068 117 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 GAGE5Q13069 117 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 GAGE13Q4V321 117 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 FER1L6-AS1Q8NA97 138 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 NUDT10Q8NFP7 164 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 OCC1Q8TAD7 63 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 NUDT11Q96G61 164 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 FAM210AQ96ND0 272 aa11.7□□□□□ -0.54
LMCD1-204ENST00000426878 TRAV8-6A0A0B4J262 113 aa11.69□□□□□ -0.54
LMCD1-204ENST00000426878 IGHV3-38A0A0C4DH36 116 aa11.69□□□□□ -0.54
LMCD1-204ENST00000426878 F2Z2F3 143 aa11.69□□□□□ -0.54
LMCD1-204ENST00000426878 GZMBP10144 247 aa11.69□□□□□ -0.54
LMCD1-204ENST00000426878 RAB4BP61018 213 aa11.69□□□□□ -0.54
LMCD1-204ENST00000426878 TOR2AQ5JU69 321 aa11.69□□□□□ -0.54
LMCD1-204ENST00000426878 EIF5A2Q9GZV4 153 aaKnown RBP11.69□□□□□ -0.54
LMCD1-204ENST00000426878 K7EN84 100 aa11.69□□□□□ -0.54
LMCD1-204ENST00000426878 LINC01556Q5JQF7 62 aa11.69□□□□□ -0.54
LMCD1-204ENST00000426878 TEX261Q6UWH6 196 aa11.69□□□□□ -0.54
LMCD1-204ENST00000426878 Q6ZRN7 208 aaPredicted RBP11.69□□□□□ -0.54
LMCD1-204ENST00000426878 DYNC1H1Q14204 4646 aaKnown RBP11.68□□□□□ -0.54
LMCD1-204ENST00000426878 A0A087WWC5 75 aa11.68□□□□□ -0.54
LMCD1-204ENST00000426878 MUC21A0A0G2JKD1 596 aa11.68□□□□□ -0.54
LMCD1-204ENST00000426878 MUC21A0A140T8X8 626 aa11.68□□□□□ -0.54
LMCD1-204ENST00000426878 CACNG7P62955 275 aa11.68□□□□□ -0.54
LMCD1-204ENST00000426878 OR10J3Q5JRS4 329 aa11.68□□□□□ -0.54
LMCD1-204ENST00000426878 NFE4Q86UQ8 179 aa11.68□□□□□ -0.54
LMCD1-204ENST00000426878 C10orf126Q8N4M7 172 aa11.68□□□□□ -0.54
LMCD1-204ENST00000426878 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
LMCD1-204ENST00000426878 AP1S3Q96PC3 154 aa11.68□□□□□ -0.54
LMCD1-204ENST00000426878 KIF25-AS1Q9Y6Z4 181 aa11.68□□□□□ -0.54
LMCD1-204ENST00000426878 WDR73Q6P4I2 378 aa11.67□□□□□ -0.54
LMCD1-204ENST00000426878 TRBV7-3A0A075B6L6 115 aa11.66□□□□□ -0.54
LMCD1-204ENST00000426878 RPL36AP83881 106 aaKnown RBP11.66□□□□□ -0.54
LMCD1-204ENST00000426878 RPL36ALQ969Q0 106 aaKnown RBP11.66□□□□□ -0.54
LMCD1-204ENST00000426878 TPPP3Q9BW30 176 aa11.66□□□□□ -0.54
LMCD1-204ENST00000426878 RNASE7Q9H1E1 156 aaKnown RBP11.66□□□□□ -0.54
LMCD1-204ENST00000426878 RPP21Q9H633 154 aaKnown RBP11.66□□□□□ -0.54
LMCD1-204ENST00000426878 SRP19P09132 144 aaKnown RBP11.65□□□□□ -0.54
LMCD1-204ENST00000426878 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
LMCD1-204ENST00000426878 ZNF56Q15929 161 aa11.65□□□□□ -0.54
LMCD1-204ENST00000426878 FAM231DQ6ZW35 169 aa11.65□□□□□ -0.54
LMCD1-204ENST00000426878 CNFNQ9BYD5 112 aa11.65□□□□□ -0.54
LMCD1-204ENST00000426878 MSRB1Q9NZV6 116 aa11.65□□□□□ -0.54
LMCD1-204ENST00000426878 CTRLP40313 264 aa11.64□□□□□ -0.55
LMCD1-204ENST00000426878 UBE2D3P61077 147 aa11.64□□□□□ -0.55
LMCD1-204ENST00000426878 SSTP61278 116 aa11.64□□□□□ -0.55
LMCD1-204ENST00000426878 UBE2D2P62837 147 aa11.64□□□□□ -0.55
LMCD1-204ENST00000426878 LYZL1Q6UWQ5 148 aa11.64□□□□□ -0.55
LMCD1-204ENST00000426878 SMIM7Q9BQ49 75 aa11.64□□□□□ -0.55
LMCD1-204ENST00000426878 CEBPGP53567 150 aa11.63□□□□□ -0.55
LMCD1-204ENST00000426878 TNFRSF18Q9Y5U5 241 aa11.63□□□□□ -0.55
LMCD1-204ENST00000426878 IBA57-AS1B1ANH7 110 aa11.62□□□□□ -0.55
LMCD1-204ENST00000426878 NEXN-AS1Q8NBZ9 246 aa11.62□□□□□ -0.55
LMCD1-204ENST00000426878 ZNF727A8MUV8 499 aa11.61□□□□□ -0.55
LMCD1-204ENST00000426878 F5H697 171 aa11.61□□□□□ -0.55
LMCD1-204ENST00000426878 TRGC1P0CF51 173 aa11.61□□□□□ -0.55
LMCD1-204ENST00000426878 NTF3P20783 257 aa11.61□□□□□ -0.55
LMCD1-204ENST00000426878 CT83Q5H943 113 aa11.61□□□□□ -0.55
LMCD1-204ENST00000426878 LINC01551Q86U37 167 aa11.61□□□□□ -0.55
LMCD1-204ENST00000426878 GATCO43716 136 aaKnown RBP11.6□□□□□ -0.55
LMCD1-204ENST00000426878 SMDT1Q9H4I9 107 aa11.6□□□□□ -0.55
LMCD1-204ENST00000426878 A8MWL6 223 aa11.6□□□□□ -0.55
LMCD1-204ENST00000426878 FOXA3P55318 350 aaPredicted RBP11.6□□□□□ -0.55
LMCD1-204ENST00000426878 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
LMCD1-204ENST00000426878 LAGE3Q14657 143 aa11.6□□□□□ -0.55
LMCD1-204ENST00000426878 FAM74A3Q4VXF1 159 aa11.6□□□□□ -0.55
LMCD1-204ENST00000426878 GTSF1Q8WW33 167 aa11.6□□□□□ -0.55
LMCD1-204ENST00000426878 H7C1H1 209 aa11.59□□□□□ -0.55
LMCD1-204ENST00000426878 M0QY20 66 aa11.59□□□□□ -0.55
LMCD1-204ENST00000426878 IGHV3-30P01768 117 aa11.59□□□□□ -0.55
LMCD1-204ENST00000426878 IGHV3-33P01772 117 aa11.59□□□□□ -0.55
LMCD1-204ENST00000426878 IGHV3-30-3P0DP02 117 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms