RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TMEM97Q5BJF2 176 aa8.03□□□□□ -1.12
HLA-DQB3-203ENST00000425319 ZC2HC1AQ96GY0 325 aa8.03□□□□□ -1.12
HLA-DQB3-203ENST00000425319 PSMG3Q9BT73 122 aaPredicted RBP8.03□□□□□ -1.12
HLA-DQB3-203ENST00000425319 TNFSF18Q9UNG2 199 aa8.03□□□□□ -1.12
HLA-DQB3-203ENST00000425319 ZFP30Q9Y2G7 519 aa8.03□□□□□ -1.12
HLA-DQB3-203ENST00000425319 TRBV7-3A0A075B6L6 115 aa8.02□□□□□ -1.13
HLA-DQB3-203ENST00000425319 UPK1BO75841 260 aa8.02□□□□□ -1.13
HLA-DQB3-203ENST00000425319 UBE2G1P62253 170 aa8.02□□□□□ -1.13
HLA-DQB3-203ENST00000425319 ZFP82Q8N141 532 aa8.02□□□□□ -1.13
HLA-DQB3-203ENST00000425319 Q8N3U1 123 aa8.02□□□□□ -1.13
HLA-DQB3-203ENST00000425319 C14orf178Q8N769 122 aaPredicted RBP8.02□□□□□ -1.13
HLA-DQB3-203ENST00000425319 SUN5Q8TC36 379 aa8.02□□□□□ -1.13
HLA-DQB3-203ENST00000425319 HIST1H2BAQ96A08 127 aa8.02□□□□□ -1.13
HLA-DQB3-203ENST00000425319 IGKV3D-20A0A0C4DH25 116 aa8.01□□□□□ -1.13
HLA-DQB3-203ENST00000425319 H3BVH4 76 aa8.01□□□□□ -1.13
HLA-DQB3-203ENST00000425319 ANGP03950 147 aaKnown RBP8.01□□□□□ -1.13
HLA-DQB3-203ENST00000425319 ATRAIDQ6UW56 229 aa8.01□□□□□ -1.13
HLA-DQB3-203ENST00000425319 SFRP2Q96HF1 295 aa8.01□□□□□ -1.13
HLA-DQB3-203ENST00000425319 MARVELD1Q9BSK0 173 aa8.01□□□□□ -1.13
HLA-DQB3-203ENST00000425319 ARL2-SNX15V9GYD0 113 aa8.01□□□□□ -1.13
HLA-DQB3-203ENST00000425319 A0A087WWL8 130 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 BORCS7-ASMTA0A0B4J1R7 106 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 M0R381 172 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 LINC00694P0DN24 101 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 ATP6V0CP27449 155 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 MIAQ16674 131 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 DNLZQ5SXM8 178 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 FAM162BQ5T6X4 162 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 C15orf54Q8N8G6 183 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 CLRN3Q8NCR9 226 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 CHCHD5Q9BSY4 110 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 JPT2Q9H910 190 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 WFDC1Q9HC57 220 aa8□□□□□ -1.13
HLA-DQB3-203ENST00000425319 TRBV6-8A0A0A6YYG3 113 aa7.99□□□□□ -1.13
HLA-DQB3-203ENST00000425319 TRAV34A0A0B4J273 112 aa7.99□□□□□ -1.13
HLA-DQB3-203ENST00000425319 GRIFINA4D1Z8 144 aa7.99□□□□□ -1.13
HLA-DQB3-203ENST00000425319 M0R036 132 aa7.99□□□□□ -1.13
HLA-DQB3-203ENST00000425319 HLA-DQA1P01909 254 aa7.99□□□□□ -1.13
HLA-DQB3-203ENST00000425319 RPL19P84098 196 aaKnown RBP7.99□□□□□ -1.13
HLA-DQB3-203ENST00000425319 INO80EQ8NBZ0 244 aaPredicted RBP7.99□□□□□ -1.13
HLA-DQB3-203ENST00000425319 AP5S1Q9NUS5 200 aa7.99□□□□□ -1.13
HLA-DQB3-203ENST00000425319 FAT1Q14517 4588 aa7.98□□□□□ -1.13
HLA-DQB3-203ENST00000425319 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.98□□□□□ -1.13
HLA-DQB3-203ENST00000425319 KRBOX1C9JBD0 128 aa7.98□□□□□ -1.13
HLA-DQB3-203ENST00000425319 F5H697 171 aa7.98□□□□□ -1.13
HLA-DQB3-203ENST00000425319 PEX7O00628 323 aa7.98□□□□□ -1.13
HLA-DQB3-203ENST00000425319 RAB4BP61018 213 aa7.98□□□□□ -1.13
HLA-DQB3-203ENST00000425319 UFSP1Q6NVU6 142 aa7.98□□□□□ -1.13
HLA-DQB3-203ENST00000425319 Q6ZRU5 148 aa7.98□□□□□ -1.13
HLA-DQB3-203ENST00000425319 STOML3Q8TAV4 291 aa7.98□□□□□ -1.13
HLA-DQB3-203ENST00000425319 FMC1Q96HJ9 113 aa7.98□□□□□ -1.13
HLA-DQB3-203ENST00000425319 VPS13BQ7Z7G8 4022 aa7.97□□□□□ -1.13
HLA-DQB3-203ENST00000425319 USP17L23D6RBM5 183 aa7.97□□□□□ -1.13
HLA-DQB3-203ENST00000425319 SMIM17P0DL12 118 aa7.97□□□□□ -1.13
HLA-DQB3-203ENST00000425319 UBE2D3P61077 147 aa7.97□□□□□ -1.13
HLA-DQB3-203ENST00000425319 UBE2D2P62837 147 aa7.97□□□□□ -1.13
HLA-DQB3-203ENST00000425319 ZNF56Q15929 161 aa7.97□□□□□ -1.13
HLA-DQB3-203ENST00000425319 C9orf163Q8N9P6 203 aa7.97□□□□□ -1.13
HLA-DQB3-203ENST00000425319 ZNF471Q9BX82 626 aaPredicted RBP7.97□□□□□ -1.13
HLA-DQB3-203ENST00000425319 CTXND1A0A1B0GTU2 59 aa7.96□□□□□ -1.14
HLA-DQB3-203ENST00000425319 SH2D1AO60880 128 aa7.96□□□□□ -1.14
HLA-DQB3-203ENST00000425319 PTTG1O95997 202 aa7.96□□□□□ -1.14
HLA-DQB3-203ENST00000425319 UBE2G2P60604 165 aa7.96□□□□□ -1.14
HLA-DQB3-203ENST00000425319 AKR1C8PQ5T2L2 129 aa7.96□□□□□ -1.14
HLA-DQB3-203ENST00000425319 ENHOQ6UWT2 76 aa7.96□□□□□ -1.14
HLA-DQB3-203ENST00000425319 TCEAL7Q9BRU2 100 aa7.96□□□□□ -1.14
HLA-DQB3-203ENST00000425319 TMSB15BA0A087X1C1 80 aa7.95□□□□□ -1.14
HLA-DQB3-203ENST00000425319 S100A9P06702 114 aaKnown RBP7.95□□□□□ -1.14
HLA-DQB3-203ENST00000425319 SPANXN1Q5VSR9 72 aa7.95□□□□□ -1.14
HLA-DQB3-203ENST00000425319 Q86TA4 180 aa7.95□□□□□ -1.14
HLA-DQB3-203ENST00000425319 OR10G8Q8NGN5 311 aa7.95□□□□□ -1.14
HLA-DQB3-203ENST00000425319 AQP10Q96PS8 301 aa7.95□□□□□ -1.14
HLA-DQB3-203ENST00000425319 Q9UF83 564 aa7.95□□□□□ -1.14
HLA-DQB3-203ENST00000425319 TRBV25-1A0A075B6N4 114 aa7.94□□□□□ -1.14
HLA-DQB3-203ENST00000425319 LINC01559Q495D7 138 aa7.94□□□□□ -1.14
HLA-DQB3-203ENST00000425319 CST9LP1Q5W188 147 aa7.94□□□□□ -1.14
HLA-DQB3-203ENST00000425319 DNAJC30Q96LL9 226 aa7.94□□□□□ -1.14
HLA-DQB3-203ENST00000425319 MED28Q9H204 178 aa7.94□□□□□ -1.14
HLA-DQB3-203ENST00000425319 MYCBP2O75592 4640 aa7.93□□□□□ -1.14
HLA-DQB3-203ENST00000425319 TRAV8-4A0A0B4J246 113 aa7.93□□□□□ -1.14
HLA-DQB3-203ENST00000425319 P01737 135 aa7.93□□□□□ -1.14
HLA-DQB3-203ENST00000425319 GZMBP10144 247 aa7.93□□□□□ -1.14
HLA-DQB3-203ENST00000425319 AKR1C3P42330 323 aa7.93□□□□□ -1.14
HLA-DQB3-203ENST00000425319 KRTAP10-4P60372 401 aaPredicted RBP7.93□□□□□ -1.14
HLA-DQB3-203ENST00000425319 COX8CQ7Z4L0 72 aa7.93□□□□□ -1.14
HLA-DQB3-203ENST00000425319 C7orf33Q8WU49 177 aa7.93□□□□□ -1.14
HLA-DQB3-203ENST00000425319 RNF185Q96GF1 192 aa7.93□□□□□ -1.14
HLA-DQB3-203ENST00000425319 DERL1Q9BUN8 251 aa7.93□□□□□ -1.14
HLA-DQB3-203ENST00000425319 IGHV3-64A0A075B6Q5 118 aa7.92□□□□□ -1.14
HLA-DQB3-203ENST00000425319 FAM74A7A6NL05 159 aa7.92□□□□□ -1.14
HLA-DQB3-203ENST00000425319 H7C1H1 209 aa7.92□□□□□ -1.14
HLA-DQB3-203ENST00000425319 PRSS1P07477 247 aa7.92□□□□□ -1.14
HLA-DQB3-203ENST00000425319 CRIP1P50238 77 aa7.92□□□□□ -1.14
HLA-DQB3-203ENST00000425319 ZNF674Q2M3X9 581 aa7.92□□□□□ -1.14
HLA-DQB3-203ENST00000425319 MPV17L2Q567V2 206 aa7.92□□□□□ -1.14
HLA-DQB3-203ENST00000425319 CFAP161Q6P656 301 aa7.92□□□□□ -1.14
HLA-DQB3-203ENST00000425319 TRBV6-1A0A0K0K1D8 114 aa7.91□□□□□ -1.14
HLA-DQB3-203ENST00000425319 hDV102S1A0JD36 115 aa7.91□□□□□ -1.14
HLA-DQB3-203ENST00000425319 FHITP49789 147 aa7.91□□□□□ -1.14
HLA-DQB3-203ENST00000425319 LINC00269Q8N2A0 174 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms