RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 SFRP2Q96HF1 295 aa9.72□□□□□ -0.85
ATG4B-209ENST00000425239 H3BVH4 76 aa9.71□□□□□ -0.86
ATG4B-209ENST00000425239 IGLV2-8P01709 118 aa9.71□□□□□ -0.86
ATG4B-209ENST00000425239 MBP02144 154 aa9.71□□□□□ -0.86
ATG4B-209ENST00000425239 ENHOQ6UWT2 76 aa9.71□□□□□ -0.86
ATG4B-209ENST00000425239 ACTR3CQ9C0K3 210 aaPredicted RBP9.71□□□□□ -0.86
ATG4B-209ENST00000425239 B4DEV8 164 aa9.7□□□□□ -0.86
ATG4B-209ENST00000425239 HNRNPA3P51991 378 aaKnown RBP9.7□□□□□ -0.86
ATG4B-209ENST00000425239 UBE2D3P61077 147 aa9.7□□□□□ -0.86
ATG4B-209ENST00000425239 UBE2D2P62837 147 aa9.7□□□□□ -0.86
ATG4B-209ENST00000425239 Q86TA4 180 aa9.7□□□□□ -0.86
ATG4B-209ENST00000425239 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
ATG4B-209ENST00000425239 RMI2Q96E14 147 aa9.7□□□□□ -0.86
ATG4B-209ENST00000425239 CHCHD7Q9BUK0 85 aa9.7□□□□□ -0.86
ATG4B-209ENST00000425239 TNXBP22105 4242 aa9.7□□□□□ -0.86
ATG4B-209ENST00000425239 A0A087WWL8 130 aa9.69□□□□□ -0.86
ATG4B-209ENST00000425239 GRIFINA4D1Z8 144 aa9.69□□□□□ -0.86
ATG4B-209ENST00000425239 RHODO00212 210 aa9.69□□□□□ -0.86
ATG4B-209ENST00000425239 DAZAP1Q96EP5 407 aaKnown RBP9.69□□□□□ -0.86
ATG4B-209ENST00000425239 ALG5Q9Y673 324 aa9.69□□□□□ -0.86
ATG4B-209ENST00000425239 TRBV10-1A0A0K0K1A3 114 aa9.68□□□□□ -0.86
ATG4B-209ENST00000425239 FAM74A7A6NL05 159 aa9.68□□□□□ -0.86
ATG4B-209ENST00000425239 PEX7O00628 323 aa9.68□□□□□ -0.86
ATG4B-209ENST00000425239 SH2D1AO60880 128 aa9.68□□□□□ -0.86
ATG4B-209ENST00000425239 ZNF674Q2M3X9 581 aa9.68□□□□□ -0.86
ATG4B-209ENST00000425239 OR10G8Q8NGN5 311 aa9.68□□□□□ -0.86
ATG4B-209ENST00000425239 URGCP-MRPS24S4R325 110 aa9.68□□□□□ -0.86
ATG4B-209ENST00000425239 M0R036 132 aa9.67□□□□□ -0.86
ATG4B-209ENST00000425239 SEC11BP0C7V7 166 aa9.67□□□□□ -0.86
ATG4B-209ENST00000425239 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
ATG4B-209ENST00000425239 FAM74A4Q5TZK3 123 aa9.67□□□□□ -0.86
ATG4B-209ENST00000425239 OR11H4Q8NGC9 324 aa9.67□□□□□ -0.86
ATG4B-209ENST00000425239 HIST1H2BAQ96A08 127 aa9.67□□□□□ -0.86
ATG4B-209ENST00000425239 ZFP30Q9Y2G7 519 aa9.67□□□□□ -0.86
ATG4B-209ENST00000425239 TRBV7-3A0A075B6L6 115 aa9.66□□□□□ -0.86
ATG4B-209ENST00000425239 A0A087WX48 190 aa9.66□□□□□ -0.86
ATG4B-209ENST00000425239 TRBV6-8A0A0A6YYG3 113 aa9.66□□□□□ -0.86
ATG4B-209ENST00000425239 UBE2G2P60604 165 aa9.66□□□□□ -0.86
ATG4B-209ENST00000425239 Q0VG73 95 aa9.66□□□□□ -0.86
ATG4B-209ENST00000425239 ELOBQ15370 118 aa9.66□□□□□ -0.86
ATG4B-209ENST00000425239 RPL7L1Q6DKI1 246 aaKnown RBP9.66□□□□□ -0.86
ATG4B-209ENST00000425239 KRTAP26-1Q6PEX3 210 aa9.66□□□□□ -0.86
ATG4B-209ENST00000425239 SYT8Q8NBV8 401 aa9.66□□□□□ -0.86
ATG4B-209ENST00000425239 TRBV6-1A0A0K0K1D8 114 aa9.65□□□□□ -0.86
ATG4B-209ENST00000425239 CTXND1A0A1B0GTU2 59 aa9.65□□□□□ -0.86
ATG4B-209ENST00000425239 IFNA7P01567 189 aa9.65□□□□□ -0.86
ATG4B-209ENST00000425239 DEFA1P59665 94 aa9.65□□□□□ -0.86
ATG4B-209ENST00000425239 DEFA3P59666 94 aa9.65□□□□□ -0.86
ATG4B-209ENST00000425239 FAM162BQ5T6X4 162 aa9.65□□□□□ -0.86
ATG4B-209ENST00000425239 PRR27Q6MZM9 219 aa9.65□□□□□ -0.86
ATG4B-209ENST00000425239 NKX6-2Q9C056 277 aaPredicted RBP9.65□□□□□ -0.86
ATG4B-209ENST00000425239 PHLDA3Q9Y5J5 127 aa9.65□□□□□ -0.86
ATG4B-209ENST00000425239 LRP2P98164 4655 aa9.64□□□□□ -0.87
ATG4B-209ENST00000425239 PANO1I0J062 215 aa9.64□□□□□ -0.87
ATG4B-209ENST00000425239 M0R381 172 aa9.64□□□□□ -0.87
ATG4B-209ENST00000425239 LTAP01374 205 aa9.64□□□□□ -0.87
ATG4B-209ENST00000425239 PRSS1P07477 247 aa9.64□□□□□ -0.87
ATG4B-209ENST00000425239 MT1HL1P0DM35 61 aa9.64□□□□□ -0.87
ATG4B-209ENST00000425239 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
ATG4B-209ENST00000425239 MPV17L2Q567V2 206 aa9.64□□□□□ -0.87
ATG4B-209ENST00000425239 NEXN-AS1Q8NBZ9 246 aa9.64□□□□□ -0.87
ATG4B-209ENST00000425239 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
ATG4B-209ENST00000425239 NTM-AS1Q6ZSK4 140 aa9.63□□□□□ -0.87
ATG4B-209ENST00000425239 C9orf163Q8N9P6 203 aa9.63□□□□□ -0.87
ATG4B-209ENST00000425239 PLA2G2DQ9UNK4 145 aa9.63□□□□□ -0.87
ATG4B-209ENST00000425239 TMSB15BA0A087X1C1 80 aa9.62□□□□□ -0.87
ATG4B-209ENST00000425239 USP17L23D6RBM5 183 aa9.62□□□□□ -0.87
ATG4B-209ENST00000425239 TPT1P13693 172 aaKnown RBP9.62□□□□□ -0.87
ATG4B-209ENST00000425239 C14orf177Q52M58 125 aa9.62□□□□□ -0.87
ATG4B-209ENST00000425239 DGAT2L7PQ6IED9 249 aa9.62□□□□□ -0.87
ATG4B-209ENST00000425239 ZFP82Q8N141 532 aa9.62□□□□□ -0.87
ATG4B-209ENST00000425239 FMC1Q96HJ9 113 aa9.62□□□□□ -0.87
ATG4B-209ENST00000425239 SSBP4Q9BWG4 385 aaPredicted RBP9.62□□□□□ -0.87
ATG4B-209ENST00000425239 C1orf43Q9BWL3 253 aa9.62□□□□□ -0.87
ATG4B-209ENST00000425239 PRR34Q9NV39 138 aa9.62□□□□□ -0.87
ATG4B-209ENST00000425239 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
ATG4B-209ENST00000425239 TMEM262E9PQX1 116 aa9.61□□□□□ -0.87
ATG4B-209ENST00000425239 G3V3Q6 166 aa9.61□□□□□ -0.87
ATG4B-209ENST00000425239 RAB4BP61018 213 aa9.61□□□□□ -0.87
ATG4B-209ENST00000425239 RPL37AP61513 92 aaKnown RBP9.61□□□□□ -0.87
ATG4B-209ENST00000425239 SDIM1Q6ZPB5 146 aa9.61□□□□□ -0.87
ATG4B-209ENST00000425239 C15orf54Q8N8G6 183 aa9.61□□□□□ -0.87
ATG4B-209ENST00000425239 RNF213Q63HN8 5207 aa9.6□□□□□ -0.87
ATG4B-209ENST00000425239 FHITP49789 147 aa9.6□□□□□ -0.87
ATG4B-209ENST00000425239 OR10AG1Q8NH19 301 aa9.6□□□□□ -0.87
ATG4B-209ENST00000425239 MLST8Q9BVC4 326 aa9.6□□□□□ -0.87
ATG4B-209ENST00000425239 CYTL1Q9NRR1 136 aa9.6□□□□□ -0.87
ATG4B-209ENST00000425239 VAX2Q9UIW0 290 aa9.6□□□□□ -0.87
ATG4B-209ENST00000425239 KIF25-AS1Q9Y6Z4 181 aa9.6□□□□□ -0.87
ATG4B-209ENST00000425239 GIPP09681 153 aaPredicted RBP9.59□□□□□ -0.87
ATG4B-209ENST00000425239 MIAQ16674 131 aa9.59□□□□□ -0.87
ATG4B-209ENST00000425239 MED28Q9H204 178 aa9.59□□□□□ -0.87
ATG4B-209ENST00000425239 SNAI2O43623 268 aa9.58□□□□□ -0.88
ATG4B-209ENST00000425239 RPL19P84098 196 aaKnown RBP9.58□□□□□ -0.88
ATG4B-209ENST00000425239 CIRBPQ14011 172 aaKnown RBP9.58□□□□□ -0.88
ATG4B-209ENST00000425239 KCNIP4Q6PIL6 250 aa9.58□□□□□ -0.88
ATG4B-209ENST00000425239 INO80EQ8NBZ0 244 aaPredicted RBP9.58□□□□□ -0.88
ATG4B-209ENST00000425239 TCEAL7Q9BRU2 100 aa9.58□□□□□ -0.88
ATG4B-209ENST00000425239 BORCS7-ASMTA0A0B4J1R7 106 aa9.57□□□□□ -0.88
ATG4B-209ENST00000425239 MAP1LC3B2A6NCE7 125 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms