RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 V9GYV3 84 aa11.17□□□□□ -0.62
DDR1-234ENST00000424544 IGHV3-16A0A0C4DH30 117 aa11.16□□□□□ -0.62
DDR1-234ENST00000424544 A0A0J9YY99 117 aa11.16□□□□□ -0.62
DDR1-234ENST00000424544 S100A4P26447 101 aaKnown RBP11.16□□□□□ -0.62
DDR1-234ENST00000424544 ASIPP42127 132 aa11.16□□□□□ -0.62
DDR1-234ENST00000424544 CT83Q5H943 113 aa11.16□□□□□ -0.62
DDR1-234ENST00000424544 GSN-AS1Q9NRJ2 163 aa11.16□□□□□ -0.62
DDR1-234ENST00000424544 C7orf77A4D0Y5 90 aa11.15□□□□□ -0.62
DDR1-234ENST00000424544 SPINK4O60575 86 aa11.15□□□□□ -0.62
DDR1-234ENST00000424544 GZMBP10144 247 aa11.15□□□□□ -0.62
DDR1-234ENST00000424544 ZNF415Q09FC8 603 aa11.15□□□□□ -0.62
DDR1-234ENST00000424544 KRTAP4-5Q9BYR2 181 aa11.15□□□□□ -0.62
DDR1-234ENST00000424544 CTDSP1Q9GZU7 261 aa11.15□□□□□ -0.62
DDR1-234ENST00000424544 ARMS2P0C7Q2 107 aa11.14□□□□□ -0.63
DDR1-234ENST00000424544 RHEBQ15382 184 aa11.14□□□□□ -0.63
DDR1-234ENST00000424544 TSKUQ8WUA8 353 aa11.14□□□□□ -0.63
DDR1-234ENST00000424544 SPXQ9BT56 116 aa11.14□□□□□ -0.63
DDR1-234ENST00000424544 MRPS16Q9Y3D3 137 aaKnown RBP11.14□□□□□ -0.63
DDR1-234ENST00000424544 A0A096LPF7 62 aa11.13□□□□□ -0.63
DDR1-234ENST00000424544 A0A1W2PPQ1 181 aa11.13□□□□□ -0.63
DDR1-234ENST00000424544 FAM231BA6NCW3 169 aa11.13□□□□□ -0.63
DDR1-234ENST00000424544 RNASE3P12724 160 aaKnown RBP11.13□□□□□ -0.63
DDR1-234ENST00000424544 BTF3P20290 206 aaKnown RBP11.13□□□□□ -0.63
DDR1-234ENST00000424544 FOXA3P55318 350 aaPredicted RBP11.13□□□□□ -0.63
DDR1-234ENST00000424544 TCL1AP56279 114 aa11.13□□□□□ -0.63
DDR1-234ENST00000424544 SSBP4Q9BWG4 385 aaPredicted RBP11.13□□□□□ -0.63
DDR1-234ENST00000424544 GFRA4Q9GZZ7 299 aa11.13□□□□□ -0.63
DDR1-234ENST00000424544 RPS10P5Q9NQ39 176 aa11.13□□□□□ -0.63
DDR1-234ENST00000424544 IL36BQ9NZH7 164 aa11.13□□□□□ -0.63
DDR1-234ENST00000424544 A0A087WWC5 75 aa11.12□□□□□ -0.63
DDR1-234ENST00000424544 IGLC6P0CF74 106 aa11.12□□□□□ -0.63
DDR1-234ENST00000424544 FER1L6-AS1Q8NA97 138 aa11.12□□□□□ -0.63
DDR1-234ENST00000424544 C9orf85Q96MD7 179 aa11.12□□□□□ -0.63
DDR1-234ENST00000424544 TMEM242Q9NWH2 141 aa11.12□□□□□ -0.63
DDR1-234ENST00000424544 SMIM27A0A1W2PRY6 76 aa11.11□□□□□ -0.63
DDR1-234ENST00000424544 F2Z2F3 143 aa11.11□□□□□ -0.63
DDR1-234ENST00000424544 H3BVH4 76 aa11.11□□□□□ -0.63
DDR1-234ENST00000424544 SNAI2O43623 268 aa11.11□□□□□ -0.63
DDR1-234ENST00000424544 CDK2AP2O75956 126 aa11.11□□□□□ -0.63
DDR1-234ENST00000424544 OR5AL1P0C617 328 aa11.11□□□□□ -0.63
DDR1-234ENST00000424544 GTSF1Q8WW33 167 aa11.11□□□□□ -0.63
DDR1-234ENST00000424544 SCRT2Q9NQ03 307 aa11.11□□□□□ -0.63
DDR1-234ENST00000424544 TRGV2A0A075B6R0 118 aa11.1□□□□□ -0.63
DDR1-234ENST00000424544 TRGV1A0A0A0MS02 117 aa11.1□□□□□ -0.63
DDR1-234ENST00000424544 M0R2P5 195 aa11.1□□□□□ -0.63
DDR1-234ENST00000424544 LYZL1Q6UWQ5 148 aa11.1□□□□□ -0.63
DDR1-234ENST00000424544 TPPP3Q9BW30 176 aa11.1□□□□□ -0.63
DDR1-234ENST00000424544 PHLDA3Q9Y5J5 127 aa11.1□□□□□ -0.63
DDR1-234ENST00000424544 HIGD1CA8MV81 97 aa11.09□□□□□ -0.63
DDR1-234ENST00000424544 C16orf90A8MZG2 172 aa11.09□□□□□ -0.63
DDR1-234ENST00000424544 TTC32Q5I0X7 151 aa11.09□□□□□ -0.63
DDR1-234ENST00000424544 WDR73Q6P4I2 378 aa11.09□□□□□ -0.63
DDR1-234ENST00000424544 ATRAIDQ6UW56 229 aa11.09□□□□□ -0.63
DDR1-234ENST00000424544 PTH2Q96A98 100 aa11.09□□□□□ -0.63
DDR1-234ENST00000424544 PGLYRP4Q96LB8 373 aa11.09□□□□□ -0.63
DDR1-234ENST00000424544 IMMP2LQ96T52 175 aa11.09□□□□□ -0.63
DDR1-234ENST00000424544 NAT8BQ9UHF3 227 aa11.09□□□□□ -0.63
DDR1-234ENST00000424544 FAT1Q14517 4588 aa11.09□□□□□ -0.63
DDR1-234ENST00000424544 CACNG7P62955 275 aa11.08□□□□□ -0.64
DDR1-234ENST00000424544 FHL2Q14192 279 aa11.08□□□□□ -0.64
DDR1-234ENST00000424544 NUP35Q8NFH5 326 aa11.08□□□□□ -0.64
DDR1-234ENST00000424544 ZNF876PQ49A33 203 aa11.07□□□□□ -0.64
DDR1-234ENST00000424544 SPANXN1Q5VSR9 72 aa11.07□□□□□ -0.64
DDR1-234ENST00000424544 Q6ZRN7 208 aaPredicted RBP11.07□□□□□ -0.64
DDR1-234ENST00000424544 SYT8Q8NBV8 401 aa11.07□□□□□ -0.64
DDR1-234ENST00000424544 RASL10AQ92737 203 aa11.07□□□□□ -0.64
DDR1-234ENST00000424544 BORCS7Q96B45 105 aa11.07□□□□□ -0.64
DDR1-234ENST00000424544 MUC21A0A0G2JKD1 596 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 MUC21A0A140T8X8 626 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 CTRLP40313 264 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 CRYBA4P53673 196 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 KRTAP10-2P60368 255 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 SSTP61278 116 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 SLAQ13239 276 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 PIK3CD-AS1Q5SR53 167 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 DMRTA1Q5VZB9 504 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 KCNIP4Q6PIL6 250 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 ZFP82Q8N141 532 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 OR10AG1Q8NH19 301 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 MRPL16Q9NX20 251 aaKnown RBP11.06□□□□□ -0.64
DDR1-234ENST00000424544 PRO0255Q9UI72 69 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 HHLA3Q9XRX5 114 aa11.06□□□□□ -0.64
DDR1-234ENST00000424544 M0R381 172 aa11.05□□□□□ -0.64
DDR1-234ENST00000424544 NTF3P20783 257 aa11.05□□□□□ -0.64
DDR1-234ENST00000424544 S100PP25815 95 aa11.05□□□□□ -0.64
DDR1-234ENST00000424544 LYPD5Q6UWN5 251 aa11.05□□□□□ -0.64
DDR1-234ENST00000424544 SPATA12Q7Z6I5 190 aa11.05□□□□□ -0.64
DDR1-234ENST00000424544 CNFNQ9BYD5 112 aa11.05□□□□□ -0.64
DDR1-234ENST00000424544 SMCO4Q9NRQ5 59 aa11.05□□□□□ -0.64
DDR1-234ENST00000424544 A0A1B0GUT8 65 aa11.04□□□□□ -0.64
DDR1-234ENST00000424544 SIVA1O15304 175 aa11.04□□□□□ -0.64
DDR1-234ENST00000424544 PAX4O43316 350 aa11.04□□□□□ -0.64
DDR1-234ENST00000424544 RIGQ13278 110 aa11.04□□□□□ -0.64
DDR1-234ENST00000424544 NXPH4O95158 308 aa11.03□□□□□ -0.64
DDR1-234ENST00000424544 TWIST1Q15672 202 aa11.03□□□□□ -0.64
DDR1-234ENST00000424544 MSRB1Q9NZV6 116 aa11.03□□□□□ -0.64
DDR1-234ENST00000424544 ICOSQ9Y6W8 199 aa11.03□□□□□ -0.64
DDR1-234ENST00000424544 TRAV9-1A0A075B6T8 112 aa11.02□□□□□ -0.65
DDR1-234ENST00000424544 IGHV3-53P01767 116 aa11.02□□□□□ -0.65
DDR1-234ENST00000424544 LINC00315P59091 139 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms